EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0034369 (Gene tree)
Gene ID: -
Gene Symbol: Calr
Alias: CRT|Calregulin
Full Name: calreticulin
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 5085 bases
Position: chr8:89046694-89051778
Accession: 88252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0090266	Calreticulin	PF00262.18	7.7e-81	1	2
MGP_C57BL6NJ_P0090266	Calreticulin	PF00262.18	7.7e-81	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0090267	-	943	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0090266	-	2184	-	MGP_C57BL6NJ_P0090266	416 (aa)	-	P14211
MGP_C57BL6NJ_T0090269	-	721	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0090268	-	854	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0034369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0034369's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0034369	Calr	80	66.366	MGP_C57BL6NJ_G0028990	Calr4	78	66.869
MGP_C57BL6NJ_G0034369	Calr	79	36.340	MGP_C57BL6NJ_G0034327	Clgn	63	36.340
MGP_C57BL6NJ_G0034369	Calr	90	51.475	MGP_C57BL6NJ_G0034277	Calr3	85	53.392