EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0090410	zf-C2H2	PF00096.26	4.6e-57	1	6
MGP_C57BL6NJ_P0090410	zf-C2H2	PF00096.26	4.6e-57	2	6
MGP_C57BL6NJ_P0090410	zf-C2H2	PF00096.26	4.6e-57	3	6
MGP_C57BL6NJ_P0090410	zf-C2H2	PF00096.26	4.6e-57	4	6
MGP_C57BL6NJ_P0090410	zf-C2H2	PF00096.26	4.6e-57	5	6
MGP_C57BL6NJ_P0090410	zf-C2H2	PF00096.26	4.6e-57	6	6
MGP_C57BL6NJ_P0090411	zf-C2H2	PF00096.26	8e-57	1	6
MGP_C57BL6NJ_P0090411	zf-C2H2	PF00096.26	8e-57	2	6
MGP_C57BL6NJ_P0090411	zf-C2H2	PF00096.26	8e-57	3	6
MGP_C57BL6NJ_P0090411	zf-C2H2	PF00096.26	8e-57	4	6
MGP_C57BL6NJ_P0090411	zf-C2H2	PF00096.26	8e-57	5	6
MGP_C57BL6NJ_P0090411	zf-C2H2	PF00096.26	8e-57	6	6
MGP_C57BL6NJ_P0090412	zf-C2H2	PF00096.26	8.4e-12	1	2
MGP_C57BL6NJ_P0090412	zf-C2H2	PF00096.26	8.4e-12	2	2
MGP_C57BL6NJ_P0090410	zf-met	PF12874.7	4.9e-05	1	4
MGP_C57BL6NJ_P0090410	zf-met	PF12874.7	4.9e-05	2	4
MGP_C57BL6NJ_P0090410	zf-met	PF12874.7	4.9e-05	3	4
MGP_C57BL6NJ_P0090410	zf-met	PF12874.7	4.9e-05	4	4
MGP_C57BL6NJ_P0090411	zf-met	PF12874.7	5.6e-05	1	4
MGP_C57BL6NJ_P0090411	zf-met	PF12874.7	5.6e-05	2	4
MGP_C57BL6NJ_P0090411	zf-met	PF12874.7	5.6e-05	3	4
MGP_C57BL6NJ_P0090411	zf-met	PF12874.7	5.6e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0090412	-	746	-	MGP_C57BL6NJ_P0090412	244 (aa)	-	-
MGP_C57BL6NJ_T0090413	-	371	-	MGP_C57BL6NJ_P0090413	121 (aa)	-	-
MGP_C57BL6NJ_T0090410	-	4557	XM_006531536	MGP_C57BL6NJ_P0090410	1271 (aa)	XP_006531602	Q80TS5
MGP_C57BL6NJ_T0090411	-	3879	-	MGP_C57BL6NJ_P0090411	1292 (aa)	-	-
MGP_C57BL6NJ_T0090414	-	696	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0090415	-	386	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0034410	Zfp423	58	37.895	MGP_C57BL6NJ_G0027338	Snai1	51	37.500
MGP_C57BL6NJ_G0034410	Zfp423	96	32.407	MGP_C57BL6NJ_G0034908	Zfp26	70	32.407