EuRBPDB

Description

Ensembl ID: MGP_C57BL6NJ_G0034423 (Gene tree)
Gene ID: -
Gene Symbol: Chd9
Alias: 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|Kiaa0308|PRIC320|Pric320|mKIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 232077 bases
Position: chr8:95464787-95696863
Accession: 1924001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0090455	ResIII	PF04851.15	4.8e-06	1	1
MGP_C57BL6NJ_P0090455	BRK	PF07533.16	3.1e-30	1	2
MGP_C57BL6NJ_P0090455	BRK	PF07533.16	3.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0090457	-	9046	-	MGP_C57BL6NJ_P0090457	2885 (aa)	-	-
MGP_C57BL6NJ_T0090455	-	11517	XM_006530568	MGP_C57BL6NJ_P0090455	2869 (aa)	XP_006530631	Q8BYH8

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0034423	Chd9	83	69.649	MGP_C57BL6NJ_G0028453	Chd7	94	54.400
MGP_C57BL6NJ_G0034423	Chd9	67	68.674	MGP_C57BL6NJ_G0021693	Chd8	83	68.910
MGP_C57BL6NJ_G0034423	Chd9	74	61.717	MGP_C57BL6NJ_G0027234	Chd6	84	71.227