EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0034637 (Gene tree)
Gene ID: -
Gene Symbol: Zfp1
Alias: Fnp-1|Zfp-1|mkr-1
Full Name: zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 39111 bases
Position: chr8:118438809-118477919
Accession: 99154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0091061	zf-C2H2	PF00096.26	2.2e-51	1	8
MGP_C57BL6NJ_P0091061	zf-C2H2	PF00096.26	2.2e-51	2	8
MGP_C57BL6NJ_P0091061	zf-C2H2	PF00096.26	2.2e-51	3	8
MGP_C57BL6NJ_P0091061	zf-C2H2	PF00096.26	2.2e-51	4	8
MGP_C57BL6NJ_P0091061	zf-C2H2	PF00096.26	2.2e-51	5	8
MGP_C57BL6NJ_P0091061	zf-C2H2	PF00096.26	2.2e-51	6	8
MGP_C57BL6NJ_P0091061	zf-C2H2	PF00096.26	2.2e-51	7	8
MGP_C57BL6NJ_P0091061	zf-C2H2	PF00096.26	2.2e-51	8	8
MGP_C57BL6NJ_P0091061	zf-met	PF12874.7	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0091061	-	1871	XM_011248348	MGP_C57BL6NJ_P0091061	403 (aa)	XP_011246650	Q3UI68

Gene Model

Click here to download MGP_C57BL6NJ_G0034637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0034637's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0034637	Zfp1	99	40.144	MGP_C57BL6NJ_G0018791	Zfp867	95	39.600
MGP_C57BL6NJ_G0034637	Zfp1	63	49.485	MGP_C57BL6NJ_G0029938	Zbtb49	76	48.611
MGP_C57BL6NJ_G0034637	Zfp1	60	46.429	MGP_C57BL6NJ_G0032011	Zfp628	60	46.073
MGP_C57BL6NJ_G0034637	Zfp1	67	39.791	MGP_C57BL6NJ_G0032019	Zfp865	80	39.286
MGP_C57BL6NJ_G0034637	Zfp1	99	48.828	MGP_C57BL6NJ_G0018644	Zfp454	98	48.828
MGP_C57BL6NJ_G0034637	Zfp1	67	45.259	MGP_C57BL6NJ_G0033529	Zfp747	66	45.259
MGP_C57BL6NJ_G0034637	Zfp1	80	52.252	MGP_C57BL6NJ_G0033526	Zfp768	51	52.018
MGP_C57BL6NJ_G0034637	Zfp1	78	61.905	MGP_C57BL6NJ_G0032270	Zfp61	60	61.905
MGP_C57BL6NJ_G0034637	Zfp1	63	39.716	MGP_C57BL6NJ_G0031136	Repin1	93	39.716
MGP_C57BL6NJ_G0034637	Zfp1	77	57.042	MGP_C57BL6NJ_G0031616	Zfp637	91	57.042
MGP_C57BL6NJ_G0034637	Zfp1	64	43.137	MGP_C57BL6NJ_G0027353	Zfp64	70	43.137
MGP_C57BL6NJ_G0034637	Zfp1	60	43.478	MGP_C57BL6NJ_G0030274	Gfi1	100	46.457
MGP_C57BL6NJ_G0034637	Zfp1	98	47.059	MGP_C57BL6NJ_G0022420	Zfp251	94	47.059
MGP_C57BL6NJ_G0034637	Zfp1	99	48.148	MGP_C57BL6NJ_G0023637	Zfp51	94	48.148
MGP_C57BL6NJ_G0034637	Zfp1	99	50.617	MGP_C57BL6NJ_G0023635	Zfp677	99	52.263
MGP_C57BL6NJ_G0034637	Zfp1	79	40.594	MGP_C57BL6NJ_G0032301	Zfp574	71	40.594
MGP_C57BL6NJ_G0034637	Zfp1	99	52.245	MGP_C57BL6NJ_G0018653	Zfp354a	98	52.245
MGP_C57BL6NJ_G0034637	Zfp1	99	42.769	MGP_C57BL6NJ_G0034262	Zfp882	99	45.349
MGP_C57BL6NJ_G0034637	Zfp1	67	46.559	MGP_C57BL6NJ_G0018741	Zfp672	90	46.559
MGP_C57BL6NJ_G0034637	Zfp1	100	42.857	MGP_C57BL6NJ_G0027315	Zfp334	99	50.427
MGP_C57BL6NJ_G0034637	Zfp1	98	51.440	MGP_C57BL6NJ_G0032591	Zfp715	95	51.440
MGP_C57BL6NJ_G0034637	Zfp1	98	45.113	MGP_C57BL6NJ_G0034971	Zfp872	99	45.113
MGP_C57BL6NJ_G0034637	Zfp1	67	45.652	MGP_C57BL6NJ_G0025014	Zfp236	60	45.652
MGP_C57BL6NJ_G0034637	Zfp1	98	38.078	MGP_C57BL6NJ_G0021088	Zfp759	99	40.391
MGP_C57BL6NJ_G0034637	Zfp1	99	51.029	MGP_C57BL6NJ_G0034908	Zfp26	89	51.029
MGP_C57BL6NJ_G0034637	Zfp1	67	42.083	MGP_C57BL6NJ_G0029473	Zbtb17	54	46.512
MGP_C57BL6NJ_G0034637	Zfp1	99	48.963	MGP_C57BL6NJ_G0021087	Rslcan18	86	48.963
MGP_C57BL6NJ_G0034637	Zfp1	67	40.167	MGP_C57BL6NJ_G0031270	Prdm5	67	50.847
MGP_C57BL6NJ_G0034637	Zfp1	99	52.489	MGP_C57BL6NJ_G0023659	Zfp945	99	52.489
MGP_C57BL6NJ_G0034637	Zfp1	75	40.183	MGP_C57BL6NJ_G0034479	Zfp319	90	40.183
MGP_C57BL6NJ_G0034637	Zfp1	67	55.689	MGP_C57BL6NJ_G0020666	Zkscan4	61	55.689
MGP_C57BL6NJ_G0034637	Zfp1	98	35.381	MGP_C57BL6NJ_G0033528	E430018J23Rik	86	35.381
MGP_C57BL6NJ_G0034637	Zfp1	88	55.319	MGP_C57BL6NJ_G0032266	Zfp235	80	55.319
MGP_C57BL6NJ_G0034637	Zfp1	100	51.739	MGP_C57BL6NJ_G0032267	Zfp111	99	51.739
MGP_C57BL6NJ_G0034637	Zfp1	80	57.534	MGP_C57BL6NJ_G0032265	Zfp112	57	57.534
MGP_C57BL6NJ_G0034637	Zfp1	75	44.649	MGP_C57BL6NJ_G0030303	4930522L14Rik	97	44.649
MGP_C57BL6NJ_G0034637	Zfp1	98	41.429	MGP_C57BL6NJ_G0026884	Zfp661	96	41.429
MGP_C57BL6NJ_G0034637	Zfp1	79	46.460	MGP_C57BL6NJ_G0023666	Zscan10	83	46.053
MGP_C57BL6NJ_G0034637	Zfp1	78	57.692	MGP_C57BL6NJ_G0032439	Zfp420	99	57.692
MGP_C57BL6NJ_G0034637	Zfp1	68	46.071	MGP_C57BL6NJ_G0034261	Zfp709	87	47.303
MGP_C57BL6NJ_G0034637	Zfp1	98	49.145	MGP_C57BL6NJ_G0021105	Zfp748	99	49.145
MGP_C57BL6NJ_G0034637	Zfp1	98	50.185	MGP_C57BL6NJ_G0032271	Zfp94	96	50.185