EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0034720 (Gene tree)
Gene ID: -
Gene Symbol: Snai3
Alias: AI643946|Smuc|Snail-related gene from muscle cells|Zfp293
Full Name: snail family zinc finger 3
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 6487 bases
Position: chr8:130196246-130202732
Accession: 1353563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0091330	zf-C2H2	PF00096.26	3.2e-24	1	4
MGP_C57BL6NJ_P0091330	zf-C2H2	PF00096.26	3.2e-24	2	4
MGP_C57BL6NJ_P0091330	zf-C2H2	PF00096.26	3.2e-24	3	4
MGP_C57BL6NJ_P0091330	zf-C2H2	PF00096.26	3.2e-24	4	4
MGP_C57BL6NJ_P0091330	zf-met	PF12874.7	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0091330	-	1589	XM_006531074	MGP_C57BL6NJ_P0091330	287 (aa)	XP_006531137	Q9QY31

Gene Model

Click here to download MGP_C57BL6NJ_G0034720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0034720's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0034720	Snai3	99	46.552	MGP_C57BL6NJ_G0022963	Snai2	99	46.599
MGP_C57BL6NJ_G0034720	Snai3	100	40.667	MGP_C57BL6NJ_G0027338	Snai1	99	41.333
MGP_C57BL6NJ_G0034720	Snai3	55	42.336	MGP_C57BL6NJ_G0031270	Prdm5	68	48.544
MGP_C57BL6NJ_G0034720	Snai3	67	47.297	MGP_C57BL6NJ_G0025014	Zfp236	59	36.242