EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0034971 (Gene tree)
Gene ID: -
Gene Symbol: Zfp872
Alias: 9530015I07Rik
Full Name: zinc finger protein 872
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 17664 bases
Position: chr9:20253184-20270847
Accession: 3588272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0092024	zf-C2H2	PF00096.26	6.2e-50	1	9
MGP_C57BL6NJ_P0092024	zf-C2H2	PF00096.26	6.2e-50	2	9
MGP_C57BL6NJ_P0092024	zf-C2H2	PF00096.26	6.2e-50	3	9
MGP_C57BL6NJ_P0092024	zf-C2H2	PF00096.26	6.2e-50	4	9
MGP_C57BL6NJ_P0092024	zf-C2H2	PF00096.26	6.2e-50	5	9
MGP_C57BL6NJ_P0092024	zf-C2H2	PF00096.26	6.2e-50	6	9
MGP_C57BL6NJ_P0092024	zf-C2H2	PF00096.26	6.2e-50	7	9
MGP_C57BL6NJ_P0092024	zf-C2H2	PF00096.26	6.2e-50	8	9
MGP_C57BL6NJ_P0092024	zf-C2H2	PF00096.26	6.2e-50	9	9
MGP_C57BL6NJ_P0092023	zf-C2H2	PF00096.26	6.4e-50	1	9
MGP_C57BL6NJ_P0092023	zf-C2H2	PF00096.26	6.4e-50	2	9
MGP_C57BL6NJ_P0092023	zf-C2H2	PF00096.26	6.4e-50	3	9
MGP_C57BL6NJ_P0092023	zf-C2H2	PF00096.26	6.4e-50	4	9
MGP_C57BL6NJ_P0092023	zf-C2H2	PF00096.26	6.4e-50	5	9
MGP_C57BL6NJ_P0092023	zf-C2H2	PF00096.26	6.4e-50	6	9
MGP_C57BL6NJ_P0092023	zf-C2H2	PF00096.26	6.4e-50	7	9
MGP_C57BL6NJ_P0092023	zf-C2H2	PF00096.26	6.4e-50	8	9
MGP_C57BL6NJ_P0092023	zf-C2H2	PF00096.26	6.4e-50	9	9
MGP_C57BL6NJ_P0092024	zf-met	PF12874.7	9e-05	1	1
MGP_C57BL6NJ_P0092023	zf-met	PF12874.7	9.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0092024	-	1395	-	MGP_C57BL6NJ_P0092024	464 (aa)	-	-
MGP_C57BL6NJ_T0092023	-	2958	-	MGP_C57BL6NJ_P0092023	465 (aa)	-	F7APL9

Gene Model

Click here to download MGP_C57BL6NJ_G0034971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0034971's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0034971	Zfp872	99	44.904	MGP_C57BL6NJ_G0023659	Zfp945	95	44.904
MGP_C57BL6NJ_G0034971	Zfp872	95	51.220	MGP_C57BL6NJ_G0032591	Zfp715	75	51.220
MGP_C57BL6NJ_G0034971	Zfp872	99	48.072	MGP_C57BL6NJ_G0018653	Zfp354a	98	48.413
MGP_C57BL6NJ_G0034971	Zfp872	99	53.571	MGP_C57BL6NJ_G0022420	Zfp251	68	54.027
MGP_C57BL6NJ_G0034971	Zfp872	83	41.964	MGP_C57BL6NJ_G0029473	Zbtb17	56	42.638
MGP_C57BL6NJ_G0034971	Zfp872	99	46.667	MGP_C57BL6NJ_G0018644	Zfp454	98	46.667
MGP_C57BL6NJ_G0034971	Zfp872	84	46.226	MGP_C57BL6NJ_G0032301	Zfp574	93	46.226
MGP_C57BL6NJ_G0034971	Zfp872	82	34.140	MGP_C57BL6NJ_G0034479	Zfp319	90	34.722
MGP_C57BL6NJ_G0034971	Zfp872	99	47.684	MGP_C57BL6NJ_G0021105	Zfp748	99	48.459
MGP_C57BL6NJ_G0034971	Zfp872	94	40.800	MGP_C57BL6NJ_G0025014	Zfp236	60	44.318
MGP_C57BL6NJ_G0034971	Zfp872	86	48.607	MGP_C57BL6NJ_G0030303	4930522L14Rik	97	48.607
MGP_C57BL6NJ_G0034971	Zfp872	96	33.159	MGP_C57BL6NJ_G0031136	Repin1	98	33.159
MGP_C57BL6NJ_G0034971	Zfp872	99	43.814	MGP_C57BL6NJ_G0023637	Zfp51	94	44.562
MGP_C57BL6NJ_G0034971	Zfp872	99	45.897	MGP_C57BL6NJ_G0023635	Zfp677	98	46.316
MGP_C57BL6NJ_G0034971	Zfp872	99	45.113	MGP_C57BL6NJ_G0034637	Zfp1	98	45.113
MGP_C57BL6NJ_G0034971	Zfp872	99	39.823	MGP_C57BL6NJ_G0027315	Zfp334	99	41.827
MGP_C57BL6NJ_G0034971	Zfp872	94	58.140	MGP_C57BL6NJ_G0032270	Zfp61	63	58.140
MGP_C57BL6NJ_G0034971	Zfp872	95	45.552	MGP_C57BL6NJ_G0032271	Zfp94	96	45.552
MGP_C57BL6NJ_G0034971	Zfp872	84	44.156	MGP_C57BL6NJ_G0032019	Zfp865	78	35.776
MGP_C57BL6NJ_G0034971	Zfp872	87	38.342	MGP_C57BL6NJ_G0019380	Zfp652	69	36.054
MGP_C57BL6NJ_G0034971	Zfp872	81	47.191	MGP_C57BL6NJ_G0032011	Zfp628	60	46.114
MGP_C57BL6NJ_G0034971	Zfp872	100	50.000	MGP_C57BL6NJ_G0021087	Rslcan18	80	47.619
MGP_C57BL6NJ_G0034971	Zfp872	86	53.608	MGP_C57BL6NJ_G0032439	Zfp420	99	54.233
MGP_C57BL6NJ_G0034971	Zfp872	99	43.006	MGP_C57BL6NJ_G0021088	Zfp759	99	46.543
MGP_C57BL6NJ_G0034971	Zfp872	95	51.163	MGP_C57BL6NJ_G0032267	Zfp111	99	47.880
MGP_C57BL6NJ_G0034971	Zfp872	94	48.159	MGP_C57BL6NJ_G0032266	Zfp235	75	48.571
MGP_C57BL6NJ_G0034971	Zfp872	88	51.672	MGP_C57BL6NJ_G0032265	Zfp112	69	52.038
MGP_C57BL6NJ_G0034971	Zfp872	80	44.330	MGP_C57BL6NJ_G0029938	Zbtb49	78	44.444
MGP_C57BL6NJ_G0034971	Zfp872	80	41.477	MGP_C57BL6NJ_G0030274	Gfi1	100	44.030
MGP_C57BL6NJ_G0034971	Zfp872	99	48.746	MGP_C57BL6NJ_G0026884	Zfp661	94	48.507
MGP_C57BL6NJ_G0034971	Zfp872	80	34.050	MGP_C57BL6NJ_G0027353	Zfp64	71	34.082
MGP_C57BL6NJ_G0034971	Zfp872	84	48.162	MGP_C57BL6NJ_G0033526	Zfp768	51	47.426
MGP_C57BL6NJ_G0034971	Zfp872	86	41.118	MGP_C57BL6NJ_G0033529	Zfp747	74	41.497
MGP_C57BL6NJ_G0034971	Zfp872	99	40.755	MGP_C57BL6NJ_G0033528	E430018J23Rik	86	41.045
MGP_C57BL6NJ_G0034971	Zfp872	99	53.118	MGP_C57BL6NJ_G0018791	Zfp867	95	53.187
MGP_C57BL6NJ_G0034971	Zfp872	97	39.935	MGP_C57BL6NJ_G0023666	Zscan10	80	39.935
MGP_C57BL6NJ_G0034971	Zfp872	99	50.409	MGP_C57BL6NJ_G0034908	Zfp26	89	50.980
MGP_C57BL6NJ_G0034971	Zfp872	87	49.091	MGP_C57BL6NJ_G0020666	Zkscan4	61	45.982
MGP_C57BL6NJ_G0034971	Zfp872	87	56.369	MGP_C57BL6NJ_G0034261	Zfp709	96	58.900
MGP_C57BL6NJ_G0034971	Zfp872	99	50.284	MGP_C57BL6NJ_G0034262	Zfp882	97	44.809
MGP_C57BL6NJ_G0034971	Zfp872	99	40.530	MGP_C57BL6NJ_G0031270	Prdm5	82	40.076
MGP_C57BL6NJ_G0034971	Zfp872	93	34.726	MGP_C57BL6NJ_G0018741	Zfp672	100	40.000
MGP_C57BL6NJ_G0034971	Zfp872	96	53.982	MGP_C57BL6NJ_G0031616	Zfp637	88	53.982