EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0035435 (Gene tree)
Gene ID: -
Gene Symbol: Rab11a
Alias: Rab11|Rab11A
Full Name: RAB11A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 21249 bases
Position: chr9:66158910-66180158
Accession: 1858202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0093356	MMR_HSR1	PF01926.23	2.3e-07	1	1
MGP_C57BL6NJ_P0093357	MMR_HSR1	PF01926.23	2.5e-07	1	1
MGP_C57BL6NJ_P0093355	MMR_HSR1	PF01926.23	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0093358	-	695	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0093354	-	397	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0093355	-	651	-	MGP_C57BL6NJ_P0093355	216 (aa)	-	-
MGP_C57BL6NJ_T0093356	-	462	-	MGP_C57BL6NJ_P0093356	153 (aa)	-	-
MGP_C57BL6NJ_T0093357	-	595	-	MGP_C57BL6NJ_P0093357	155 (aa)	-	-
MGP_C57BL6NJ_T0093351	-	726	-	MGP_C57BL6NJ_P0093351	86 (aa)	-	P62492
MGP_C57BL6NJ_T0093352	-	603	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0093353	-	500	-	MGP_C57BL6NJ_P0093353	86 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0035435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0035435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0035435	Rab11a	89	43.885	MGP_C57BL6NJ_G0019764	Rab37	77	45.181
MGP_C57BL6NJ_G0035435	Rab11a	81	34.127	MGP_C57BL6NJ_G0031923	Kras	87	37.725
MGP_C57BL6NJ_G0035435	Rab11a	77	37.288	MGP_C57BL6NJ_G0030553	Ran	89	33.766
MGP_C57BL6NJ_G0035435	Rab11a	95	54.110	MGP_C57BL6NJ_G0026068	Rab14	97	54.422
MGP_C57BL6NJ_G0035435	Rab11a	81	34.921	MGP_C57BL6NJ_G0028104	Nras	95	37.931
MGP_C57BL6NJ_G0035435	Rab11a	75	40.000	MGP_C57BL6NJ_G0022651	Rabl2	67	37.908
MGP_C57BL6NJ_G0035435	Rab11a	100	50.000	MGP_C57BL6NJ_G0018457	Rab1a	85	52.299
MGP_C57BL6NJ_G0035435	Rab11a	94	35.780	MGP_C57BL6NJ_G0017745	Rab36	79	35.780
MGP_C57BL6NJ_G0035435	Rab11a	78	31.746	MGP_C57BL6NJ_G0020090	Arl4a	60	31.746
MGP_C57BL6NJ_G0035435	Rab11a	90	40.426	MGP_C57BL6NJ_G0036192	Rab33a	74	39.665
MGP_C57BL6NJ_G0035435	Rab11a	88	31.293	MGP_C57BL6NJ_G0030817	Rasl11a	60	31.293
MGP_C57BL6NJ_G0035435	Rab11a	95	70.748	MGP_C57BL6NJ_G0027819	Rab25	99	62.150
MGP_C57BL6NJ_G0035435	Rab11a	89	42.143	MGP_C57BL6NJ_G0036600	Rab9b	86	41.040
MGP_C57BL6NJ_G0035435	Rab11a	84	38.281	MGP_C57BL6NJ_G0033057	Rab6a	84	35.955
MGP_C57BL6NJ_G0035435	Rab11a	90	43.796	MGP_C57BL6NJ_G0024393	Rab12	84	37.799
MGP_C57BL6NJ_G0035435	Rab11a	88	49.265	MGP_C57BL6NJ_G0036361	Rab39b	82	46.857
MGP_C57BL6NJ_G0035435	Rab11a	87	38.686	MGP_C57BL6NJ_G0031441	Rab7	93	42.857
MGP_C57BL6NJ_G0035435	Rab11a	79	39.669	MGP_C57BL6NJ_G0032029	Rasl2-9	70	36.364
MGP_C57BL6NJ_G0035435	Rab11a	91	44.604	MGP_C57BL6NJ_G0032997	Rab30	97	37.981
MGP_C57BL6NJ_G0035435	Rab11a	92	34.752	MGP_C57BL6NJ_G0016293	Rab23	80	32.984
MGP_C57BL6NJ_G0035435	Rab11a	90	49.635	MGP_C57BL6NJ_G0030405	Rab35	99	42.512
MGP_C57BL6NJ_G0035435	Rab11a	81	31.746	MGP_C57BL6NJ_G0035663	Mras	85	32.768
MGP_C57BL6NJ_G0035435	Rab11a	100	96.078	MGP_C57BL6NJ_G0023942	Rab11b	97	100.000
MGP_C57BL6NJ_G0035435	Rab11a	93	42.254	MGP_C57BL6NJ_G0024384	Rab31	86	41.071
MGP_C57BL6NJ_G0035435	Rab11a	91	56.835	MGP_C57BL6NJ_G0028452	Rab2a	81	54.971
MGP_C57BL6NJ_G0035435	Rab11a	93	41.379	MGP_C57BL6NJ_G0027616	Rab33b	85	37.799
MGP_C57BL6NJ_G0035435	Rab11a	76	31.667	MGP_C57BL6NJ_G0019601	Arl4d	58	31.667
MGP_C57BL6NJ_G0035435	Rab11a	91	56.115	MGP_C57BL6NJ_G0021694	Rab2b	95	51.366
MGP_C57BL6NJ_G0035435	Rab11a	88	49.630	MGP_C57BL6NJ_G0019558	Rab5c	90	41.262
MGP_C57BL6NJ_G0035435	Rab11a	97	52.201	MGP_C57BL6NJ_G0025106	Rab1b	84	55.357
MGP_C57BL6NJ_G0035435	Rab11a	93	48.252	MGP_C57BL6NJ_G0024539	Rab18	78	47.531
MGP_C57BL6NJ_G0035435	Rab11a	91	46.763	MGP_C57BL6NJ_G0020255	Rab15	93	40.887
MGP_C57BL6NJ_G0035435	Rab11a	74	30.303	MGP_C57BL6NJ_G0019954	Dnajc27	60	30.303
MGP_C57BL6NJ_G0035435	Rab11a	68	30.065	MGP_C57BL6NJ_G0016921	Arl8a	77	30.065
MGP_C57BL6NJ_G0035435	Rab11a	90	43.066	MGP_C57BL6NJ_G0027382	Rab22a	81	42.038
MGP_C57BL6NJ_G0035435	Rab11a	88	48.148	MGP_C57BL6NJ_G0024293	Rab5a	91	41.951
MGP_C57BL6NJ_G0035435	Rab11a	88	35.821	MGP_C57BL6NJ_G0035686	Rab6b	77	35.404
MGP_C57BL6NJ_G0035435	Rab11a	94	39.423	MGP_C57BL6NJ_G0036753	Rab9	97	39.423
MGP_C57BL6NJ_G0035435	Rab11a	86	34.586	MGP_C57BL6NJ_G0029786	Rheb	89	32.927
MGP_C57BL6NJ_G0035435	Rab11a	81	34.921	MGP_C57BL6NJ_G0033708	Hras	85	37.654