EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0035558 (Gene tree)
Gene ID: -
Gene Symbol: Ddx43
Alias: ENSMUSG00000070291|OTTMUSG00000019690
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 28923 bases
Position: chr9:81021972-81050894
Accession: 3642857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0093859	KH_1	PF00013.29	4.5e-12	1	1
MGP_C57BL6NJ_P0093859	DEAD	PF00270.29	2.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0093859	-	2207	-	MGP_C57BL6NJ_P0093859	646 (aa)	-	D3Z6P9

Gene Model

Click here to download MGP_C57BL6NJ_G0035558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0035558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0035558	Ddx43	54	33.799	MGP_C57BL6NJ_G0017699	Ddx50	53	33.799
MGP_C57BL6NJ_G0035558	Ddx43	60	39.012	MGP_C57BL6NJ_G0017321	D1Pas1	61	39.012
MGP_C57BL6NJ_G0035558	Ddx43	68	44.519	MGP_C57BL6NJ_G0019705	Ddx5	89	45.040
MGP_C57BL6NJ_G0035558	Ddx43	54	31.831	MGP_C57BL6NJ_G0019870	Eif4a3	84	31.831
MGP_C57BL6NJ_G0035558	Ddx43	55	32.086	MGP_C57BL6NJ_G0016816	Ddx18	55	32.000
MGP_C57BL6NJ_G0035558	Ddx43	54	30.159	MGP_C57BL6NJ_G0034568	Ddx28	70	30.423
MGP_C57BL6NJ_G0035558	Ddx43	62	33.580	MGP_C57BL6NJ_G0016945	Ddx59	64	33.333
MGP_C57BL6NJ_G0035558	Ddx43	68	43.527	MGP_C57BL6NJ_G0022487	Ddx17	67	43.527
MGP_C57BL6NJ_G0035558	Ddx43	53	32.033	MGP_C57BL6NJ_G0030529	Ddx55	57	32.033
MGP_C57BL6NJ_G0035558	Ddx43	57	40.310	MGP_C57BL6NJ_G0036071	Ddx3x	61	39.259
MGP_C57BL6NJ_G0035558	Ddx43	60	40.000	MGP_C57BL6NJ_G0021324	Ddx4	56	40.000
MGP_C57BL6NJ_G0035558	Ddx43	59	35.678	MGP_C57BL6NJ_G0031854	Ddx47	91	34.218
MGP_C57BL6NJ_G0035558	Ddx43	64	36.941	MGP_C57BL6NJ_G0020986	Ddx41	65	37.232
MGP_C57BL6NJ_G0035558	Ddx43	63	40.757	MGP_C57BL6NJ_G0022715	Ddx23	54	40.757
MGP_C57BL6NJ_G0035558	Ddx43	74	36.270	MGP_C57BL6NJ_G0019690	Ddx42	50	36.270
MGP_C57BL6NJ_G0035558	Ddx43	60	34.913	MGP_C57BL6NJ_G0034195	Ddx49	81	34.913
MGP_C57BL6NJ_G0035558	Ddx43	56	32.514	MGP_C57BL6NJ_G0018937	Eif4a1	81	32.143
MGP_C57BL6NJ_G0035558	Ddx43	63	34.135	MGP_C57BL6NJ_G0019255	Ddx52	69	34.135