EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0035624 (Gene tree)
Gene ID: -
Gene Symbol: Plod2
Alias: D530025C14Rik|LH2|Plod-2|lysyl hydroxylase 2
Full Name: procollagen lysine%2C 2-oxoglutarate 5-dioxygenase 2
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 71258 bases
Position: chr9:96225705-96296962
Accession: 1347007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0094159	2OG-FeII_Oxy	PF03171.20	1.3e-05	1	1
MGP_C57BL6NJ_P0094160	2OG-FeII_Oxy	PF03171.20	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0094159	-	3649	-	MGP_C57BL6NJ_P0094159	737 (aa)	-	Q9R0B9
MGP_C57BL6NJ_T0094162	-	596	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0094163	-	1276	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0094160	-	3663	-	MGP_C57BL6NJ_P0094160	758 (aa)	-	-
MGP_C57BL6NJ_T0094161	-	844	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0035624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0035624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0035624	Plod2	95	59.829	MGP_C57BL6NJ_G0030643	Plod3	100	57.895
MGP_C57BL6NJ_G0035624	Plod2	95	60.313	MGP_C57BL6NJ_G0029540	Plod1	99	59.041