EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0035686 (Gene tree)
Gene ID: -
Gene Symbol: Rab6b
Alias: 9630015C03|AI844641|C330006L04Rik|D9Bwg0185e|Rab6B
Full Name: RAB6B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 75458 bases
Position: chr9:107628334-107703791
Accession: 107283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0094448	MMR_HSR1	PF01926.23	9.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0094448	-	5007	-	MGP_C57BL6NJ_P0094448	208 (aa)	-	-
MGP_C57BL6NJ_T0094447	-	716	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0035686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0035686's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0035686	Rab6b	85	36.667	MGP_C57BL6NJ_G0019159	Rab34	68	36.667
MGP_C57BL6NJ_G0035686	Rab6b	95	38.119	MGP_C57BL6NJ_G0024539	Rab18	94	38.119
MGP_C57BL6NJ_G0035686	Rab6b	75	32.278	MGP_C57BL6NJ_G0031923	Kras	83	32.278
MGP_C57BL6NJ_G0035686	Rab6b	93	37.879	MGP_C57BL6NJ_G0025106	Rab1b	96	37.879
MGP_C57BL6NJ_G0035686	Rab6b	98	42.718	MGP_C57BL6NJ_G0024293	Rab5a	95	42.718
MGP_C57BL6NJ_G0035686	Rab6b	92	36.269	MGP_C57BL6NJ_G0027382	Rab22a	98	36.269
MGP_C57BL6NJ_G0035686	Rab6b	98	41.379	MGP_C57BL6NJ_G0019558	Rab5c	94	41.379
MGP_C57BL6NJ_G0035686	Rab6b	76	41.139	MGP_C57BL6NJ_G0016293	Rab23	66	41.139
MGP_C57BL6NJ_G0035686	Rab6b	94	36.620	MGP_C57BL6NJ_G0017745	Rab36	80	36.620
MGP_C57BL6NJ_G0035686	Rab6b	94	34.328	MGP_C57BL6NJ_G0027616	Rab33b	86	34.466
MGP_C57BL6NJ_G0035686	Rab6b	77	30.769	MGP_C57BL6NJ_G0030817	Rasl11a	69	30.769
MGP_C57BL6NJ_G0035686	Rab6b	100	90.865	MGP_C57BL6NJ_G0033057	Rab6a	100	90.865
MGP_C57BL6NJ_G0035686	Rab6b	94	35.176	MGP_C57BL6NJ_G0031441	Rab7	91	47.191
MGP_C57BL6NJ_G0035686	Rab6b	94	36.408	MGP_C57BL6NJ_G0026068	Rab14	95	36.408
MGP_C57BL6NJ_G0035686	Rab6b	74	32.680	MGP_C57BL6NJ_G0022651	Rabl2	67	32.680
MGP_C57BL6NJ_G0035686	Rab6b	75	35.000	MGP_C57BL6NJ_G0029786	Rheb	85	35.000
MGP_C57BL6NJ_G0035686	Rab6b	82	35.028	MGP_C57BL6NJ_G0036753	Rab9	87	35.028
MGP_C57BL6NJ_G0035686	Rab6b	77	35.404	MGP_C57BL6NJ_G0023942	Rab11b	91	36.296
MGP_C57BL6NJ_G0035686	Rab6b	95	34.466	MGP_C57BL6NJ_G0036192	Rab33a	86	34.466
MGP_C57BL6NJ_G0035686	Rab6b	94	36.410	MGP_C57BL6NJ_G0018457	Rab1a	94	36.410
MGP_C57BL6NJ_G0035686	Rab6b	77	44.099	MGP_C57BL6NJ_G0019764	Rab37	75	44.099
MGP_C57BL6NJ_G0035686	Rab6b	76	39.623	MGP_C57BL6NJ_G0024393	Rab12	65	39.623
MGP_C57BL6NJ_G0035686	Rab6b	95	34.615	MGP_C57BL6NJ_G0036361	Rab39b	98	34.615
MGP_C57BL6NJ_G0035686	Rab6b	86	39.888	MGP_C57BL6NJ_G0028452	Rab2a	81	39.888
MGP_C57BL6NJ_G0035686	Rab6b	77	41.615	MGP_C57BL6NJ_G0032997	Rab30	79	41.615
MGP_C57BL6NJ_G0035686	Rab6b	75	32.911	MGP_C57BL6NJ_G0028104	Nras	99	33.333
MGP_C57BL6NJ_G0035686	Rab6b	74	38.961	MGP_C57BL6NJ_G0030405	Rab35	76	38.961
MGP_C57BL6NJ_G0035686	Rab6b	76	31.875	MGP_C57BL6NJ_G0035663	Mras	84	30.337
MGP_C57BL6NJ_G0035686	Rab6b	94	36.585	MGP_C57BL6NJ_G0020255	Rab15	96	36.585
MGP_C57BL6NJ_G0035686	Rab6b	77	35.404	MGP_C57BL6NJ_G0035435	Rab11a	88	35.821
MGP_C57BL6NJ_G0035686	Rab6b	93	36.816	MGP_C57BL6NJ_G0021694	Rab2b	90	36.816
MGP_C57BL6NJ_G0035686	Rab6b	87	36.464	MGP_C57BL6NJ_G0024384	Rab31	92	36.464
MGP_C57BL6NJ_G0035686	Rab6b	94	32.323	MGP_C57BL6NJ_G0027819	Rab25	93	32.323
MGP_C57BL6NJ_G0035686	Rab6b	93	32.000	MGP_C57BL6NJ_G0036600	Rab9b	97	32.000
MGP_C57BL6NJ_G0035686	Rab6b	95	30.151	MGP_C57BL6NJ_G0033708	Hras	98	30.151