EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0035719 (Gene tree)
Gene ID: -
Gene Symbol: Poc1a
Alias: 2510040D07Rik|Wdr51a|cha
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 72918 bases
Position: chr9:111050909-111123826
Accession: 1917485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0094628	eIF2A	PF08662.11	2.7e-10	1	1
MGP_C57BL6NJ_P0094627	eIF2A	PF08662.11	4.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0094629	-	1521	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0094628	-	1242	-	MGP_C57BL6NJ_P0094628	356 (aa)	-	-
MGP_C57BL6NJ_T0094630	-	727	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0094631	-	533	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0094627	-	1695	XM_006511831	MGP_C57BL6NJ_P0094627	405 (aa)	XP_006511894	Q8JZX3

Gene Model

Click here to download MGP_C57BL6NJ_G0035719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0035719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0035719	Poc1a	83	34.109	MGP_C57BL6NJ_G0023192	Wdr5b	92	34.135
MGP_C57BL6NJ_G0035719	Poc1a	82	30.000	MGP_C57BL6NJ_G0028772	Prpf4	56	30.000
MGP_C57BL6NJ_G0035719	Poc1a	80	30.037	MGP_C57BL6NJ_G0025277	Prpf19	55	30.037
MGP_C57BL6NJ_G0035719	Poc1a	81	32.353	MGP_C57BL6NJ_G0035321	Wdr61	97	31.658
MGP_C57BL6NJ_G0035719	Poc1a	93	32.716	MGP_C57BL6NJ_G0028080	Wdr3	61	32.716
MGP_C57BL6NJ_G0035719	Poc1a	82	32.218	MGP_C57BL6NJ_G0021248	Utp15	52	32.218
MGP_C57BL6NJ_G0035719	Poc1a	83	35.659	MGP_C57BL6NJ_G0025932	Wdr5	98	30.973
MGP_C57BL6NJ_G0035719	Poc1a	80	36.364	MGP_C57BL6NJ_G0026874	Ciao1	85	36.364