EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0036039 (Gene tree)
Gene ID: -
Gene Symbol: Rbm3
Alias: 2600016C11Rik
Full Name: RNA binding motif protein 3
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 6689 bases
Position: chrX:2880819-2887507
Accession: 1099460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0096116	RRM_1	PF00076.22	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0096115	-	2234	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0096117	-	721	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0096116	-	2713	-	MGP_C57BL6NJ_P0096116	135 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0036039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0036039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0036039	Rbm3	61	35.366	MGP_C57BL6NJ_G0028998	Elavl4	58	31.646
MGP_C57BL6NJ_G0036039	Rbm3	66	37.500	MGP_C57BL6NJ_G0028865	Elavl2	63	32.911
MGP_C57BL6NJ_G0036039	Rbm3	70	38.462	MGP_C57BL6NJ_G0028025	Sf3b4	53	38.462
MGP_C57BL6NJ_G0036039	Rbm3	66	37.349	MGP_C57BL6NJ_G0031411	Tia1	70	41.333
MGP_C57BL6NJ_G0036039	Rbm3	93	43.243	MGP_C57BL6NJ_G0019317	Msi2	61	42.857
MGP_C57BL6NJ_G0036039	Rbm3	72	43.038	MGP_C57BL6NJ_G0027257	Pabpc1l	52	43.038
MGP_C57BL6NJ_G0036039	Rbm3	64	34.483	MGP_C57BL6NJ_G0016426	Boll	57	34.211
MGP_C57BL6NJ_G0036039	Rbm3	92	36.508	MGP_C57BL6NJ_G0030211	Hnrnpd	70	34.667
MGP_C57BL6NJ_G0036039	Rbm3	67	33.333	MGP_C57BL6NJ_G0027608	Pabpc4l	64	36.842
MGP_C57BL6NJ_G0036039	Rbm3	69	72.165	MGP_C57BL6NJ_G0017880	Cirbp	80	75.581
MGP_C57BL6NJ_G0036039	Rbm3	73	40.404	MGP_C57BL6NJ_G0017886	Dazap1	78	46.032
MGP_C57BL6NJ_G0036039	Rbm3	61	56.098	MGP_C57BL6NJ_G0036247	Rbmx	79	56.790
MGP_C57BL6NJ_G0036039	Rbm3	55	35.135	MGP_C57BL6NJ_G0030526	Snrnp35	55	34.848