EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0036134 (Gene tree)
Gene ID: -
Gene Symbol: Sept6
Alias: 2810035H17Rik|C920001C06Rik|Kiaa0128|Sep6|mKIAA0128
Full Name: septin 6
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 82661 bases
Position: chrX:32483536-32566196
Accession: 1888939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0096400	MMR_HSR1	PF01926.23	6.7e-05	1	1
MGP_C57BL6NJ_P0096401	MMR_HSR1	PF01926.23	6.7e-05	1	1
MGP_C57BL6NJ_P0096399	MMR_HSR1	PF01926.23	6.8e-05	1	1
MGP_C57BL6NJ_P0096402	MMR_HSR1	PF01926.23	0.00022	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0096403	-	3389	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0096402	-	530	-	MGP_C57BL6NJ_P0096402	141 (aa)	-	-
MGP_C57BL6NJ_T0096399	-	3451	XM_006541388	MGP_C57BL6NJ_P0096399	427 (aa)	XP_006541451	Q9R1T4
MGP_C57BL6NJ_T0096400	-	4667	-	MGP_C57BL6NJ_P0096400	425 (aa)	-	-
MGP_C57BL6NJ_T0096401	-	1839	-	MGP_C57BL6NJ_P0096401	432 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0036134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0036134's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0036134	Sept6	100	81.713	MGP_C57BL6NJ_G0030188	Sept11	100	81.713
MGP_C57BL6NJ_G0036134	Sept6	76	41.791	MGP_C57BL6NJ_G0023031	Sept5	90	41.716
MGP_C57BL6NJ_G0036134	Sept6	99	76.777	MGP_C57BL6NJ_G0018690	Sept8	99	76.471
MGP_C57BL6NJ_G0036134	Sept6	99	36.552	MGP_C57BL6NJ_G0019838	Sept9	81	46.970
MGP_C57BL6NJ_G0036134	Sept6	99	69.976	MGP_C57BL6NJ_G0017649	Sept10	100	69.302
MGP_C57BL6NJ_G0036134	Sept6	69	43.234	MGP_C57BL6NJ_G0016739	Sept2	100	41.284
MGP_C57BL6NJ_G0036134	Sept6	68	42.088	MGP_C57BL6NJ_G0022549	Sept3	88	42.088
MGP_C57BL6NJ_G0036134	Sept6	97	40.618	MGP_C57BL6NJ_G0034987	Sept7	94	39.905
MGP_C57BL6NJ_G0036134	Sept6	67	43.390	MGP_C57BL6NJ_G0019298	Sept4	89	43.062
MGP_C57BL6NJ_G0036134	Sept6	67	41.176	MGP_C57BL6NJ_G0022895	Sept12	80	38.077
MGP_C57BL6NJ_G0036134	Sept6	76	41.349	MGP_C57BL6NJ_G0033520	Sept1	100	40.136