EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0036361 (Gene tree)
Gene ID: -
Gene Symbol: Rab39b
Alias: 6330580M05Rik|Rab39B
Full Name: RAB39B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 6186 bases
Position: chrX:73711657-73717842
Accession: 1915040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0097238	MMR_HSR1	PF01926.23	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0097238	-	3401	-	MGP_C57BL6NJ_P0097238	213 (aa)	-	Q8BHC1

Gene Model

Click here to download MGP_C57BL6NJ_G0036361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0036361's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0036361	Rab39b	78	42.262	MGP_C57BL6NJ_G0024393	Rab12	68	42.262
MGP_C57BL6NJ_G0036361	Rab39b	80	30.286	MGP_C57BL6NJ_G0019954	Dnajc27	64	30.286
MGP_C57BL6NJ_G0036361	Rab39b	81	39.884	MGP_C57BL6NJ_G0024539	Rab18	83	39.884
MGP_C57BL6NJ_G0036361	Rab39b	73	36.306	MGP_C57BL6NJ_G0019159	Rab34	60	36.306
MGP_C57BL6NJ_G0036361	Rab39b	99	39.810	MGP_C57BL6NJ_G0025106	Rab1b	99	39.810
MGP_C57BL6NJ_G0036361	Rab39b	80	43.275	MGP_C57BL6NJ_G0027819	Rab25	79	43.275
MGP_C57BL6NJ_G0036361	Rab39b	69	30.612	MGP_C57BL6NJ_G0029786	Rheb	79	30.612
MGP_C57BL6NJ_G0036361	Rab39b	84	43.017	MGP_C57BL6NJ_G0030405	Rab35	82	44.444
MGP_C57BL6NJ_G0036361	Rab39b	78	37.952	MGP_C57BL6NJ_G0031923	Kras	87	37.349
MGP_C57BL6NJ_G0036361	Rab39b	98	43.868	MGP_C57BL6NJ_G0028452	Rab2a	94	45.545
MGP_C57BL6NJ_G0036361	Rab39b	77	34.940	MGP_C57BL6NJ_G0017745	Rab36	62	34.940
MGP_C57BL6NJ_G0036361	Rab39b	75	43.125	MGP_C57BL6NJ_G0020255	Rab15	75	43.125
MGP_C57BL6NJ_G0036361	Rab39b	80	36.782	MGP_C57BL6NJ_G0035663	Mras	81	36.782
MGP_C57BL6NJ_G0036361	Rab39b	86	35.519	MGP_C57BL6NJ_G0028104	Nras	98	37.333
MGP_C57BL6NJ_G0036361	Rab39b	76	44.785	MGP_C57BL6NJ_G0019764	Rab37	75	44.785
MGP_C57BL6NJ_G0036361	Rab39b	82	46.857	MGP_C57BL6NJ_G0035435	Rab11a	88	49.265
MGP_C57BL6NJ_G0036361	Rab39b	75	31.875	MGP_C57BL6NJ_G0022651	Rabl2	69	31.875
MGP_C57BL6NJ_G0036361	Rab39b	98	34.615	MGP_C57BL6NJ_G0035686	Rab6b	95	34.615
MGP_C57BL6NJ_G0036361	Rab39b	78	36.747	MGP_C57BL6NJ_G0027382	Rab22a	85	36.747
MGP_C57BL6NJ_G0036361	Rab39b	77	36.585	MGP_C57BL6NJ_G0024293	Rab5a	75	36.585
MGP_C57BL6NJ_G0036361	Rab39b	82	39.106	MGP_C57BL6NJ_G0036753	Rab9	88	39.106
MGP_C57BL6NJ_G0036361	Rab39b	82	47.126	MGP_C57BL6NJ_G0023942	Rab11b	90	49.265
MGP_C57BL6NJ_G0036361	Rab39b	76	34.545	MGP_C57BL6NJ_G0031441	Rab7	91	37.778
MGP_C57BL6NJ_G0036361	Rab39b	75	48.171	MGP_C57BL6NJ_G0036192	Rab33a	69	48.171
MGP_C57BL6NJ_G0036361	Rab39b	77	38.922	MGP_C57BL6NJ_G0036600	Rab9b	82	38.922
MGP_C57BL6NJ_G0036361	Rab39b	76	48.447	MGP_C57BL6NJ_G0032997	Rab30	78	48.447
MGP_C57BL6NJ_G0036361	Rab39b	87	42.473	MGP_C57BL6NJ_G0026068	Rab14	93	46.479
MGP_C57BL6NJ_G0036361	Rab39b	73	36.538	MGP_C57BL6NJ_G0016293	Rab23	65	36.538
MGP_C57BL6NJ_G0036361	Rab39b	78	38.554	MGP_C57BL6NJ_G0033708	Hras	86	38.554
MGP_C57BL6NJ_G0036361	Rab39b	77	36.585	MGP_C57BL6NJ_G0019558	Rab5c	75	36.585
MGP_C57BL6NJ_G0036361	Rab39b	75	39.623	MGP_C57BL6NJ_G0033057	Rab6a	75	39.623
MGP_C57BL6NJ_G0036361	Rab39b	80	31.844	MGP_C57BL6NJ_G0030817	Rasl11a	73	31.844
MGP_C57BL6NJ_G0036361	Rab39b	77	46.707	MGP_C57BL6NJ_G0027616	Rab33b	72	46.707
MGP_C57BL6NJ_G0036361	Rab39b	78	38.690	MGP_C57BL6NJ_G0024384	Rab31	85	38.690
MGP_C57BL6NJ_G0036361	Rab39b	92	45.408	MGP_C57BL6NJ_G0021694	Rab2b	90	45.408
MGP_C57BL6NJ_G0036361	Rab39b	84	43.820	MGP_C57BL6NJ_G0018457	Rab1a	86	43.820