EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0036555 (Gene tree)
Gene ID: -
Gene Symbol: Cstf2
Alias: C630034J23Rik|Cstf64|mir-3112
Full Name: cleavage stimulation factor%2C 3' pre-RNA subunit 2
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 27655 bases
Position: chrX:135071401-135099055
Accession: 1343054
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0097867	RRM_1	PF00076.22	2.5e-25	1	1
MGP_C57BL6NJ_P0097865	RRM_1	PF00076.22	2.7e-25	1	1
MGP_C57BL6NJ_P0097866	RRM_1	PF00076.22	2.9e-25	1	1
MGP_C57BL6NJ_P0097870	RRM_1	PF00076.22	2.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0097868	-	743	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0097869	-	7543	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0097866	-	4502	-	MGP_C57BL6NJ_P0097866	580 (aa)	-	-
MGP_C57BL6NJ_T0097867	-	2717	-	MGP_C57BL6NJ_P0097867	510 (aa)	-	-
MGP_C57BL6NJ_T0097865	-	3661	XM_006528478	MGP_C57BL6NJ_P0097865	554 (aa)	XP_006528541	Q8BIQ5
MGP_C57BL6NJ_T0097871	-	775	-	MGP_C57BL6NJ_P0097871	258 (aa)	-	-
MGP_C57BL6NJ_T0097870	-	552	-	MGP_C57BL6NJ_P0097870	184 (aa)	-	-
MGP_C57BL6NJ_T0097872	-	574	-	MGP_C57BL6NJ_P0097872	191 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0036555's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0036555	Cstf2	86	87.342	MGP_C57BL6NJ_G0025453	Cstf2t	99	63.318