EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0013936 (Gene tree)
Gene ID: 110296772
Gene Symbol: Rrs1
Alias: 5730466A07Rik|D1Ertd701e
Full Name: ribosome biogenesis regulator homolog
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 2076 bases
Position: chr1:5705339-5707414
Accession: 110296772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0016636	RRS1	PF04939.12	3.3e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0016636	-	2076	XM_021165547	MGP_CAROLIEiJ_P0016636	362 (aa)	XP_021021206	UPI000A319BF3

Gene Model

Click here to download MGP_CAROLIEiJ_G0013936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0013936's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0013936	Rrs1	100	90.137	ENSG00000179041	RRS1	100	90.411	Homo_sapiens
MGP_CAROLIEiJ_G0013936	Rrs1	88	67.296	ENSATEG00000011743	rrs1	94	65.579	Anabas_testudineus
MGP_CAROLIEiJ_G0013936	Rrs1	100	89.041	ENSANAG00000018116	RRS1	100	89.315	Aotus_nancymaae
MGP_CAROLIEiJ_G0013936	Rrs1	84	65.902	ENSAMXG00000037893	rrs1	91	60.833	Astyanax_mexicanus
MGP_CAROLIEiJ_G0013936	Rrs1	100	88.219	ENSBTAG00000016716	RRS1	100	88.493	Bos_taurus
MGP_CAROLIEiJ_G0013936	Rrs1	71	44.528	WBGene00007617	rrbs-1	78	44.528	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0013936	Rrs1	100	89.041	ENSCJAG00000022034	RRS1	100	89.315	Callithrix_jacchus
MGP_CAROLIEiJ_G0013936	Rrs1	100	88.219	ENSCAFG00000007313	RRS1	100	88.493	Canis_familiaris
MGP_CAROLIEiJ_G0013936	Rrs1	100	88.219	ENSCAFG00020020365	-	100	88.493	Canis_lupus_dingo
MGP_CAROLIEiJ_G0013936	Rrs1	100	88.219	ENSCAFG00020016049	-	100	88.493	Canis_lupus_dingo
MGP_CAROLIEiJ_G0013936	Rrs1	100	88.767	ENSCHIG00000009141	RRS1	100	89.041	Capra_hircus
MGP_CAROLIEiJ_G0013936	Rrs1	91	89.394	ENSCPOG00000000647	RRS1	100	88.219	Cavia_porcellus
MGP_CAROLIEiJ_G0013936	Rrs1	100	89.315	ENSCCAG00000032186	RRS1	100	89.589	Cebus_capucinus
MGP_CAROLIEiJ_G0013936	Rrs1	100	90.411	ENSCATG00000016944	RRS1	100	90.685	Cercocebus_atys
MGP_CAROLIEiJ_G0013936	Rrs1	100	90.685	ENSCSAG00000018552	RRS1	100	90.685	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0013936	Rrs1	88	93.691	ENSCHOG00000002455	RRS1	100	90.411	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0013936	Rrs1	88	66.258	ENSCPBG00000021374	RRS1	96	65.192	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0013936	Rrs1	88	48.607	ENSCING00000002177	-	99	48.607	Ciona_intestinalis
MGP_CAROLIEiJ_G0013936	Rrs1	88	47.692	ENSCSAVG00000011819	-	99	47.692	Ciona_savignyi
MGP_CAROLIEiJ_G0013936	Rrs1	100	89.589	ENSCANG00000012718	RRS1	100	89.863	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0013936	Rrs1	100	92.055	ENSCGRG00001002391	-	100	92.055	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0013936	Rrs1	98	88.515	ENSCGRG00001015575	-	99	88.515	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0013936	Rrs1	83	56.146	ENSCSEG00000014750	rrs1	98	54.237	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0013936	Rrs1	84	57.329	ENSCVAG00000017878	rrs1	98	55.977	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0013936	Rrs1	83	66.333	ENSDARG00000003941	rrs1	97	63.988	Danio_rerio
MGP_CAROLIEiJ_G0013936	Rrs1	100	87.432	ENSDNOG00000017900	RRS1	99	89.041	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0013936	Rrs1	61	92.308	ENSDORG00000026331	Rrs1	100	86.296	Dipodomys_ordii
MGP_CAROLIEiJ_G0013936	Rrs1	80	45.763	FBgn0052409	CG32409	99	43.251	Drosophila_melanogaster
MGP_CAROLIEiJ_G0013936	Rrs1	56	84.577	ENSETEG00000000935	-	55	84.577	Echinops_telfairi
MGP_CAROLIEiJ_G0013936	Rrs1	81	56.122	ENSEBUG00000013506	rrs1	96	54.861	Eptatretus_burgeri
MGP_CAROLIEiJ_G0013936	Rrs1	100	89.589	ENSEASG00005001691	RRS1	100	89.863	Equus_asinus_asinus
MGP_CAROLIEiJ_G0013936	Rrs1	100	84.254	ENSECAG00000004492	RRS1	100	84.254	Equus_caballus
MGP_CAROLIEiJ_G0013936	Rrs1	100	87.123	ENSEEUG00000013719	RRS1	100	88.767	Erinaceus_europaeus
MGP_CAROLIEiJ_G0013936	Rrs1	100	89.589	ENSFCAG00000014332	RRS1	100	89.863	Felis_catus
MGP_CAROLIEiJ_G0013936	Rrs1	81	64.570	ENSGALG00000030890	RRS1	99	61.625	Gallus_gallus
MGP_CAROLIEiJ_G0013936	Rrs1	87	61.905	ENSGACG00000002969	rrs1	99	59.003	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0013936	Rrs1	88	65.138	ENSGAGG00000023718	RRS1	97	63.944	Gopherus_agassizii
MGP_CAROLIEiJ_G0013936	Rrs1	100	90.959	ENSGGOG00000026663	RRS1	100	91.233	Gorilla_gorilla
MGP_CAROLIEiJ_G0013936	Rrs1	100	87.397	ENSHGLG00000021423	RRS1	100	87.945	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0013936	Rrs1	100	87.397	ENSHGLG00100020640	RRS1	100	87.945	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0013936	Rrs1	99	62.465	ENSHCOG00000015358	rrs1	96	63.025	Hippocampus_comes
MGP_CAROLIEiJ_G0013936	Rrs1	82	65.772	ENSIPUG00000014412	rrs1	99	62.428	Ictalurus_punctatus
MGP_CAROLIEiJ_G0013936	Rrs1	100	91.781	ENSSTOG00000026310	RRS1	100	91.781	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0013936	Rrs1	77	82.437	ENSJJAG00000020395	-	100	71.625	Jaculus_jaculus
MGP_CAROLIEiJ_G0013936	Rrs1	85	90.909	ENSJJAG00000011507	-	100	87.193	Jaculus_jaculus
MGP_CAROLIEiJ_G0013936	Rrs1	93	61.310	ENSKMAG00000008238	rrs1	99	61.823	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0013936	Rrs1	85	67.097	ENSLACG00000004058	RRS1	99	65.653	Latimeria_chalumnae
MGP_CAROLIEiJ_G0013936	Rrs1	84	69.180	ENSLOCG00000017812	rrs1	98	66.269	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0013936	Rrs1	88	92.429	ENSLAFG00000015405	RRS1	99	89.315	Loxodonta_africana
MGP_CAROLIEiJ_G0013936	Rrs1	100	90.137	ENSMFAG00000042747	RRS1	100	90.137	Macaca_fascicularis
MGP_CAROLIEiJ_G0013936	Rrs1	100	90.137	ENSMMUG00000000886	RRS1	100	90.137	Macaca_mulatta
MGP_CAROLIEiJ_G0013936	Rrs1	100	90.137	ENSMNEG00000011696	RRS1	100	90.137	Macaca_nemestrina
MGP_CAROLIEiJ_G0013936	Rrs1	100	90.411	ENSMLEG00000004794	RRS1	100	90.685	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0013936	Rrs1	83	67.774	ENSMZEG00005004349	RRS1	92	65.957	Maylandia_zebra
MGP_CAROLIEiJ_G0013936	Rrs1	100	93.681	ENSMAUG00000005392	Rrs1	100	93.681	Mesocricetus_auratus
MGP_CAROLIEiJ_G0013936	Rrs1	96	93.642	ENSMOCG00000015862	Rrs1	90	93.642	Microtus_ochrogaster
MGP_CAROLIEiJ_G0013936	Rrs1	90	78.354	ENSMODG00000024952	RRS1	99	76.486	Monodelphis_domestica
MGP_CAROLIEiJ_G0013936	Rrs1	100	98.356	ENSMUSG00000061024	Rrs1	100	98.356	Mus_musculus
MGP_CAROLIEiJ_G0013936	Rrs1	100	95.342	MGP_PahariEiJ_G0023883	Rrs1	100	95.342	Mus_pahari
MGP_CAROLIEiJ_G0013936	Rrs1	100	98.630	MGP_SPRETEiJ_G0014739	Rrs1	100	98.630	Mus_spretus
MGP_CAROLIEiJ_G0013936	Rrs1	100	87.945	ENSMPUG00000018626	RRS1	98	87.945	Mustela_putorius_furo
MGP_CAROLIEiJ_G0013936	Rrs1	100	88.767	ENSNGAG00000012904	Rrs1	100	90.411	Nannospalax_galili
MGP_CAROLIEiJ_G0013936	Rrs1	88	83.282	ENSNLEG00000027730	RRS1	96	89.116	Nomascus_leucogenys
MGP_CAROLIEiJ_G0013936	Rrs1	83	68.439	ENSONIG00000014187	rrs1	95	66.163	Oreochromis_niloticus
MGP_CAROLIEiJ_G0013936	Rrs1	91	72.205	ENSOANG00000012348	RRS1	98	70.430	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0013936	Rrs1	90	91.743	ENSOCUG00000013490	RRS1	100	86.721	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0013936	Rrs1	87	57.143	ENSOMEG00000008525	rrs1	99	53.955	Oryzias_melastigma
MGP_CAROLIEiJ_G0013936	Rrs1	100	88.767	ENSOGAG00000001085	RRS1	100	89.041	Otolemur_garnettii
MGP_CAROLIEiJ_G0013936	Rrs1	100	83.014	ENSOARG00000017417	RRS1	98	83.288	Ovis_aries
MGP_CAROLIEiJ_G0013936	Rrs1	100	90.411	ENSPPAG00000024378	RRS1	100	90.685	Pan_paniscus
MGP_CAROLIEiJ_G0013936	Rrs1	100	89.315	ENSPPRG00000021408	RRS1	100	89.589	Panthera_pardus
MGP_CAROLIEiJ_G0013936	Rrs1	100	90.137	ENSPTRG00000030988	RRS1	100	90.411	Pan_troglodytes
MGP_CAROLIEiJ_G0013936	Rrs1	100	64.932	ENSPANG00000035974	RRS1	100	65.479	Papio_anubis
MGP_CAROLIEiJ_G0013936	Rrs1	82	67.677	ENSPKIG00000007953	rrs1	98	63.988	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0013936	Rrs1	100	89.589	ENSPEMG00000014427	Rrs1	100	91.781	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0013936	Rrs1	82	60.067	ENSPMAG00000006513	rrs1	97	55.405	Petromyzon_marinus
MGP_CAROLIEiJ_G0013936	Rrs1	85	82.468	ENSPCIG00000026695	RRS1	100	78.356	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0013936	Rrs1	83	69.231	ENSPFOG00000020722	rrs1	100	67.077	Poecilia_formosa
MGP_CAROLIEiJ_G0013936	Rrs1	84	58.361	ENSPREG00000019960	rrs1	99	55.182	Poecilia_reticulata
MGP_CAROLIEiJ_G0013936	Rrs1	82	94.276	ENSPPYG00000018637	RRS1	100	94.276	Pongo_abelii
MGP_CAROLIEiJ_G0013936	Rrs1	91	90.909	ENSPCAG00000009115	RRS1	100	88.767	Procavia_capensis
MGP_CAROLIEiJ_G0013936	Rrs1	81	67.123	ENSPNAG00000021707	rrs1	97	63.663	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0013936	Rrs1	100	94.795	ENSRNOG00000007240	Rrs1	100	94.795	Rattus_norvegicus
MGP_CAROLIEiJ_G0013936	Rrs1	100	89.589	ENSRBIG00000009132	RRS1	100	89.863	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0013936	Rrs1	100	89.589	ENSRROG00000013472	RRS1	100	89.863	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0013936	Rrs1	100	85.083	ENSSBOG00000012639	-	100	86.575	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0013936	Rrs1	100	86.740	ENSSBOG00000011006	-	100	87.293	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0013936	Rrs1	81	55.631	ENSSFOG00015015772	rrs1	97	53.687	Scleropages_formosus
MGP_CAROLIEiJ_G0013936	Rrs1	82	66.892	ENSSMAG00000015226	rrs1	92	64.179	Scophthalmus_maximus
MGP_CAROLIEiJ_G0013936	Rrs1	82	85.393	ENSSARG00000006976	RRS1	82	85.393	Sorex_araneus
MGP_CAROLIEiJ_G0013936	Rrs1	100	89.863	ENSSSCG00000006214	RRS1	100	89.863	Sus_scrofa
MGP_CAROLIEiJ_G0013936	Rrs1	86	64.194	ENSTRUG00000008796	rrs1	94	64.331	Takifugu_rubripes
MGP_CAROLIEiJ_G0013936	Rrs1	76	67.754	ENSTNIG00000004026	rrs1	99	65.396	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0013936	Rrs1	100	89.589	ENSTBEG00000014752	RRS1	100	89.589	Tupaia_belangeri
MGP_CAROLIEiJ_G0013936	Rrs1	100	89.589	ENSUAMG00000008502	RRS1	100	89.589	Ursus_americanus
MGP_CAROLIEiJ_G0013936	Rrs1	100	88.493	ENSVVUG00000018452	RRS1	100	88.767	Vulpes_vulpes
MGP_CAROLIEiJ_G0013936	Rrs1	83	68.896	ENSXCOG00000009809	rrs1	94	66.168	Xiphophorus_couchianus