EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0014010 (Gene tree)
Gene ID: 110294753
Gene Symbol: Khdrbs2
Alias: 6330586C16Rik|SLM-1
Full Name: KH RNA binding domain containing%2C signal transduction associated 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 427111 bases
Position: chr1:27036173-27463283
Accession: 110294753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0016975	KH_1	PF00013.29	4.3e-09	1	1
MGP_CAROLIEiJ_P0016977	KH_1	PF00013.29	4.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0016975	-	2279	XM_021163203	MGP_CAROLIEiJ_P0016975	349 (aa)	XP_021018862	UPI000A31A6FF
MGP_CAROLIEiJ_T0016977	-	5030	-	MGP_CAROLIEiJ_P0016977	194 (aa)	-	-
MGP_CAROLIEiJ_T0016976	-	3242	-	MGP_CAROLIEiJ_P0016976	89 (aa)	-	-
MGP_CAROLIEiJ_T0016979	-	275	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0016978	-	558	-	MGP_CAROLIEiJ_P0016978	92 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0014010's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0014010's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0014010	Khdrbs2	99	59.669	MGP_CAROLIEiJ_G0026534	Khdrbs1	78	60.057
MGP_CAROLIEiJ_G0014010	Khdrbs2	64	37.395	MGP_CAROLIEiJ_G0021057	Qk	58	41.053
MGP_CAROLIEiJ_G0014010	Khdrbs2	99	65.915	MGP_CAROLIEiJ_G0019855	Khdrbs3	99	63.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.842	ENSG00000112232	KHDRBS2	100	94.842	Homo_sapiens
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	68.466	ENSAPOG00000008806	khdrbs2	100	67.898	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0014010	Khdrbs2	77	94.815	ENSAMEG00000007111	KHDRBS2	99	95.113	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	67.614	ENSACIG00000020525	khdrbs2	100	66.856	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	67.614	ENSAOCG00000011333	khdrbs2	100	66.761	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0014010	Khdrbs2	96	64.897	ENSAPEG00000019843	khdrbs2	99	64.478	Amphiprion_percula
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	68.182	ENSATEG00000020863	khdrbs2	100	67.614	Anabas_testudineus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	90.544	ENSAPLG00000013452	KHDRBS2	100	89.685	Anas_platyrhynchos
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	87.106	ENSACAG00000006691	KHDRBS2	100	86.246	Anolis_carolinensis
MGP_CAROLIEiJ_G0014010	Khdrbs2	85	95.623	ENSANAG00000024792	KHDRBS2	99	95.623	Aotus_nancymaae
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	69.122	ENSACLG00000002710	khdrbs2	100	68.555	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0014010	Khdrbs2	88	74.434	ENSAMXG00000009582	khdrbs2	89	74.434	Astyanax_mexicanus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	89.971	ENSBTAG00000043990	KHDRBS2	100	89.971	Bos_taurus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	95.415	ENSCJAG00000001766	KHDRBS2	100	95.415	Callithrix_jacchus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.269	ENSCAFG00000002470	KHDRBS2	100	94.269	Canis_familiaris
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.269	ENSCAFG00020015926	KHDRBS2	100	94.269	Canis_lupus_dingo
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	89.398	ENSCHIG00000024242	KHDRBS2	100	89.398	Capra_hircus
MGP_CAROLIEiJ_G0014010	Khdrbs2	91	95.597	ENSTSYG00000007203	KHDRBS2	91	95.597	Carlito_syrichta
MGP_CAROLIEiJ_G0014010	Khdrbs2	91	92.767	ENSCPOG00000025621	KHDRBS2	100	92.767	Cavia_porcellus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	79.083	ENSCCAG00000037746	KHDRBS2	100	80.516	Cebus_capucinus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	95.415	ENSCATG00000042976	KHDRBS2	100	95.415	Cercocebus_atys
MGP_CAROLIEiJ_G0014010	Khdrbs2	91	94.340	ENSCLAG00000000509	KHDRBS2	100	94.340	Chinchilla_lanigera
MGP_CAROLIEiJ_G0014010	Khdrbs2	77	95.185	ENSCSAG00000013462	KHDRBS2	96	95.489	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	67.622	ENSCHOG00000013616	KHDRBS2	100	67.335	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	91.977	ENSCPBG00000022649	KHDRBS2	100	91.117	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	95.415	ENSCANG00000021348	KHDRBS2	100	95.415	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	97.421	ENSCGRG00001022657	Khdrbs2	100	97.421	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0014010	Khdrbs2	77	97.037	ENSCGRG00000003079	-	96	97.037	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	59.026	ENSCSEG00000005064	khdrbs2	100	58.263	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0014010	Khdrbs2	77	85.106	ENSCVAG00000020560	khdrbs2	95	81.773	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	73.429	ENSDARG00000069469	khdrbs2	100	73.143	Danio_rerio
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	95.129	ENSDNOG00000014028	KHDRBS2	100	95.129	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0014010	Khdrbs2	94	85.627	ENSDORG00000005701	Khdrbs2	100	86.792	Dipodomys_ordii
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	76.791	ENSETEG00000002241	KHDRBS2	100	76.791	Echinops_telfairi
MGP_CAROLIEiJ_G0014010	Khdrbs2	99	48.256	ENSEBUG00000007596	khdrbs2	88	50.435	Eptatretus_burgeri
MGP_CAROLIEiJ_G0014010	Khdrbs2	93	54.360	ENSEBUG00000007730	khdrbs2	98	51.961	Eptatretus_burgeri
MGP_CAROLIEiJ_G0014010	Khdrbs2	79	49.662	ENSEBUG00000012421	khdrbs2	99	48.110	Eptatretus_burgeri
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.842	ENSEASG00005003578	KHDRBS2	100	94.842	Equus_asinus_asinus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.556	ENSECAG00000021541	KHDRBS2	100	94.556	Equus_caballus
MGP_CAROLIEiJ_G0014010	Khdrbs2	91	92.744	ENSEEUG00000003986	KHDRBS2	100	92.744	Erinaceus_europaeus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	71.510	ENSELUG00000020898	khdrbs2	100	69.143	Esox_lucius
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	95.129	ENSFCAG00000046207	KHDRBS2	78	95.129	Felis_catus
MGP_CAROLIEiJ_G0014010	Khdrbs2	91	89.342	ENSFALG00000001691	KHDRBS2	99	89.655	Ficedula_albicollis
MGP_CAROLIEiJ_G0014010	Khdrbs2	91	84.591	ENSFDAG00000008941	KHDRBS2	100	85.220	Fukomys_damarensis
MGP_CAROLIEiJ_G0014010	Khdrbs2	81	49.310	ENSFHEG00000021135	khdrbs2	89	48.966	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	62.040	ENSGMOG00000005065	khdrbs2	100	61.648	Gadus_morhua
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	89.112	ENSGALG00000016276	KHDRBS2	100	88.252	Gallus_gallus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	68.750	ENSGAFG00000007645	khdrbs2	100	67.330	Gambusia_affinis
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	67.139	ENSGACG00000006097	khdrbs2	100	66.477	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0014010	Khdrbs2	64	83.784	ENSGAGG00000023457	-	68	90.155	Gopherus_agassizii
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.842	ENSGGOG00000025068	KHDRBS2	100	94.842	Gorilla_gorilla
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	69.122	ENSHBUG00000008029	khdrbs2	100	68.555	Haplochromis_burtoni
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	91.691	ENSHGLG00000017439	KHDRBS2	100	91.691	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	91.691	ENSHGLG00100003817	KHDRBS2	100	91.691	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	64.023	ENSHCOG00000013857	khdrbs2	100	60.224	Hippocampus_comes
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	75.714	ENSIPUG00000015437	khdrbs2	100	76.286	Ictalurus_punctatus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	95.415	ENSSTOG00000011529	KHDRBS2	100	95.415	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	93.983	ENSJJAG00000017812	Khdrbs2	100	93.983	Jaculus_jaculus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	69.688	ENSKMAG00000018214	khdrbs2	100	68.750	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0014010	Khdrbs2	99	66.762	ENSLBEG00000013077	khdrbs2	86	67.143	Labrus_bergylta
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	78.571	ENSLOCG00000017016	khdrbs2	98	78.571	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	95.129	ENSLAFG00000006655	KHDRBS2	100	95.129	Loxodonta_africana
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	95.415	ENSMFAG00000002823	KHDRBS2	100	95.415	Macaca_fascicularis
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	95.415	ENSMNEG00000042875	KHDRBS2	100	95.415	Macaca_nemestrina
MGP_CAROLIEiJ_G0014010	Khdrbs2	77	95.185	ENSMLEG00000022013	KHDRBS2	99	95.489	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	67.236	ENSMAMG00000015552	khdrbs2	100	68.182	Mastacembelus_armatus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	68.555	ENSMZEG00005005504	khdrbs2	100	67.989	Maylandia_zebra
MGP_CAROLIEiJ_G0014010	Khdrbs2	56	96.447	ENSMAUG00000013631	Khdrbs2	72	96.447	Mesocricetus_auratus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.842	ENSMICG00000010315	KHDRBS2	100	94.842	Microcebus_murinus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	96.848	ENSMOCG00000012101	Khdrbs2	100	96.848	Microtus_ochrogaster
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	66.761	ENSMMOG00000007708	khdrbs2	100	65.909	Mola_mola
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	91.691	ENSMODG00000018714	KHDRBS2	100	91.691	Monodelphis_domestica
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	65.909	ENSMALG00000002214	khdrbs2	100	65.625	Monopterus_albus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	99.427	ENSMUSG00000026058	Khdrbs2	100	99.427	Mus_musculus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	99.140	MGP_PahariEiJ_G0027259	Khdrbs2	100	99.140	Mus_pahari
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	99.427	MGP_SPRETEiJ_G0014814	Khdrbs2	100	99.427	Mus_spretus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.842	ENSMPUG00000002607	KHDRBS2	100	94.842	Mustela_putorius_furo
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.269	ENSMLUG00000005484	KHDRBS2	100	94.269	Myotis_lucifugus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	69.122	ENSNBRG00000013759	khdrbs2	100	68.555	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0014010	Khdrbs2	91	91.824	ENSODEG00000015927	KHDRBS2	100	91.824	Octodon_degus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	69.492	ENSONIG00000009755	khdrbs2	100	68.555	Oreochromis_niloticus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.556	ENSOCUG00000012344	KHDRBS2	100	94.556	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	67.898	ENSORLG00000010165	khdrbs2	100	67.330	Oryzias_latipes
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	67.614	ENSORLG00020020168	khdrbs2	100	67.045	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	67.614	ENSORLG00015003971	khdrbs2	100	67.045	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	67.330	ENSOMEG00000001684	khdrbs2	100	66.761	Oryzias_melastigma
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.842	ENSOGAG00000015071	KHDRBS2	100	94.842	Otolemur_garnettii
MGP_CAROLIEiJ_G0014010	Khdrbs2	95	88.166	ENSOARG00000005603	KHDRBS2	97	88.166	Ovis_aries
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.556	ENSPPAG00000032651	KHDRBS2	100	94.556	Pan_paniscus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	95.415	ENSPPRG00000008147	KHDRBS2	100	95.415	Panthera_pardus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	95.415	ENSPTIG00000020547	KHDRBS2	100	95.415	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.842	ENSPTRG00000018311	KHDRBS2	100	94.842	Pan_troglodytes
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	95.415	ENSPANG00000021881	KHDRBS2	100	95.415	Papio_anubis
MGP_CAROLIEiJ_G0014010	Khdrbs2	59	96.491	ENSPSIG00000015682	-	81	96.491	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	67.806	ENSPMGG00000008580	khdrbs2	100	65.812	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	68.839	ENSPFOG00000011638	khdrbs2	100	67.898	Poecilia_formosa
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	67.898	ENSPLAG00000023478	khdrbs2	100	66.761	Poecilia_latipinna
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	68.466	ENSPMEG00000011563	khdrbs2	100	67.330	Poecilia_mexicana
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	68.839	ENSPREG00000022525	khdrbs2	100	67.898	Poecilia_reticulata
MGP_CAROLIEiJ_G0014010	Khdrbs2	58	98.214	ENSPPYG00000029598	-	97	97.549	Pongo_abelii
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	81.948	ENSPCAG00000001426	KHDRBS2	100	81.948	Procavia_capensis
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	81.948	ENSPCOG00000018881	KHDRBS2	100	81.948	Propithecus_coquereli
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	69.122	ENSPNYG00000019550	khdrbs2	100	68.555	Pundamilia_nyererei
MGP_CAROLIEiJ_G0014010	Khdrbs2	99	76.149	ENSPNAG00000008598	khdrbs2	99	76.149	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	97.708	ENSRNOG00000012284	Khdrbs2	100	97.708	Rattus_norvegicus
MGP_CAROLIEiJ_G0014010	Khdrbs2	91	94.620	ENSRBIG00000039774	KHDRBS2	99	94.620	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	95.129	ENSSBOG00000019779	KHDRBS2	100	95.129	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	76.286	ENSSFOG00015012491	khdrbs2	100	75.429	Scleropages_formosus
MGP_CAROLIEiJ_G0014010	Khdrbs2	99	66.856	ENSSMAG00000006422	khdrbs2	89	66.572	Scophthalmus_maximus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	69.801	ENSSDUG00000023520	khdrbs2	100	69.231	Seriola_dumerili
MGP_CAROLIEiJ_G0014010	Khdrbs2	99	69.143	ENSSLDG00000019363	khdrbs2	98	68.571	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	73.352	ENSSARG00000004121	KHDRBS2	100	73.352	Sorex_araneus
MGP_CAROLIEiJ_G0014010	Khdrbs2	70	90.535	ENSSPUG00000006155	KHDRBS2	76	89.121	Sphenodon_punctatus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.269	ENSSSCG00000001490	KHDRBS2	100	94.269	Sus_scrofa
MGP_CAROLIEiJ_G0014010	Khdrbs2	69	89.583	ENSTGUG00000012786	KHDRBS2	98	88.559	Taeniopygia_guttata
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	64.033	ENSTRUG00000015760	khdrbs2	100	63.662	Takifugu_rubripes
MGP_CAROLIEiJ_G0014010	Khdrbs2	58	83.036	ENSTNIG00000016577	khdrbs2	100	83.036	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	92.837	ENSTTRG00000005591	KHDRBS2	100	92.837	Tursiops_truncatus
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.842	ENSUMAG00000018593	KHDRBS2	100	94.842	Ursus_maritimus
MGP_CAROLIEiJ_G0014010	Khdrbs2	91	92.114	ENSVPAG00000001469	KHDRBS2	100	92.114	Vicugna_pacos
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	94.269	ENSVVUG00000008652	KHDRBS2	100	94.269	Vulpes_vulpes
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	75.072	ENSXETG00000004451	khdrbs2	100	71.920	Xenopus_tropicalis
MGP_CAROLIEiJ_G0014010	Khdrbs2	100	68.750	ENSXMAG00000009415	khdrbs2	100	67.045	Xiphophorus_maculatus