EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0014057 (Gene tree)
Gene ID: 110298402
Gene Symbol: Mrpl30
Alias: 2310001L22Rik|MRP-L28|Rpml28
Full Name: mitochondrial ribosomal protein L30
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 9295 bases
Position: chr1:32524751-32534045
Accession: 110298402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0017241	Ribosomal_L30	PF00327.20	1.1e-14	1	1
MGP_CAROLIEiJ_P0017238	Ribosomal_L30	PF00327.20	1.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0017239	-	356	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0017238	-	2132	-	MGP_CAROLIEiJ_P0017238	160 (aa)	XP_021023291	UPI000A316519
MGP_CAROLIEiJ_T0017240	-	1758	-	MGP_CAROLIEiJ_P0017240	6 (aa)	-	UPI00053BD8EC
MGP_CAROLIEiJ_T0017242	-	644	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0017241	-	501	-	MGP_CAROLIEiJ_P0017241	128 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0014057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0014057's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.156	ENSG00000185414	MRPL30	98	85.443	Homo_sapiens
MGP_CAROLIEiJ_G0014057	Mrpl30	100	86.719	ENSAMEG00000013344	-	86	84.177	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.156	ENSANAG00000028266	-	98	86.076	Aotus_nancymaae
MGP_CAROLIEiJ_G0014057	Mrpl30	100	83.594	ENSBTAG00000038949	MRPL30	99	81.761	Bos_taurus
MGP_CAROLIEiJ_G0014057	Mrpl30	95	55.738	ENSBTAG00000050222	-	95	52.597	Bos_taurus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	87.500	ENSCJAG00000007085	-	98	87.975	Callithrix_jacchus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.156	ENSCAFG00000031628	-	98	84.177	Canis_familiaris
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.156	ENSCAFG00020024965	-	98	84.177	Canis_lupus_dingo
MGP_CAROLIEiJ_G0014057	Mrpl30	100	84.375	ENSCHIG00000024135	-	99	83.019	Capra_hircus
MGP_CAROLIEiJ_G0014057	Mrpl30	99	70.886	ENSTSYG00000037066	-	98	70.886	Carlito_syrichta
MGP_CAROLIEiJ_G0014057	Mrpl30	99	85.443	ENSTSYG00000026939	-	98	85.443	Carlito_syrichta
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.271	ENSCPOG00000010716	-	100	85.161	Cavia_porcellus
MGP_CAROLIEiJ_G0014057	Mrpl30	99	85.443	ENSCCAG00000034467	-	98	85.443	Cebus_capucinus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	79.688	ENSCCAG00000017186	-	98	79.874	Cebus_capucinus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	87.500	ENSCATG00000041078	-	98	87.975	Cercocebus_atys
MGP_CAROLIEiJ_G0014057	Mrpl30	100	88.281	ENSCLAG00000005684	-	87	87.742	Chinchilla_lanigera
MGP_CAROLIEiJ_G0014057	Mrpl30	100	86.719	ENSCSAG00000017218	-	98	86.076	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	79.688	ENSCHOG00000005804	-	93	79.747	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.938	ENSCANG00000043682	-	98	86.076	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	93.125	ENSCGRG00001006119	Mrpl30	100	93.125	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0014057	Mrpl30	100	93.125	ENSCGRG00000001910	Mrpl30	100	93.125	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0014057	Mrpl30	100	79.688	ENSDNOG00000018648	-	98	80.380	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	75.000	ENSDNOG00000042586	-	97	73.077	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0014057	Mrpl30	99	78.481	ENSDNOG00000044391	-	98	78.481	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	78.125	ENSDNOG00000032825	-	98	74.684	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	86.250	ENSDORG00000010734	Mrpl30	100	86.250	Dipodomys_ordii
MGP_CAROLIEiJ_G0014057	Mrpl30	100	87.500	ENSETEG00000005006	-	93	86.709	Echinops_telfairi
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.156	ENSEASG00005021843	-	61	84.076	Equus_asinus_asinus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.156	ENSECAG00000015993	-	61	84.076	Equus_caballus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	86.719	ENSFCAG00000024233	-	66	85.000	Felis_catus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	84.375	ENSFDAG00000009803	-	87	83.871	Fukomys_damarensis
MGP_CAROLIEiJ_G0014057	Mrpl30	99	85.443	ENSGGOG00000041571	-	98	85.443	Gorilla_gorilla
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.156	ENSHGLG00000006467	-	100	85.065	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.156	ENSHGLG00100016969	-	100	85.065	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.000	ENSJJAG00000006196	Mrpl30	99	85.000	Jaculus_jaculus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	86.719	ENSLAFG00000008151	-	87	83.019	Loxodonta_africana
MGP_CAROLIEiJ_G0014057	Mrpl30	100	86.719	ENSMFAG00000001729	MRPL30	98	86.709	Macaca_fascicularis
MGP_CAROLIEiJ_G0014057	Mrpl30	100	86.719	ENSMMUG00000038088	-	98	86.709	Macaca_mulatta
MGP_CAROLIEiJ_G0014057	Mrpl30	99	70.886	ENSMNEG00000034146	-	98	70.886	Macaca_nemestrina
MGP_CAROLIEiJ_G0014057	Mrpl30	100	87.500	ENSMLEG00000027758	-	98	87.342	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	93.750	ENSMAUG00000017646	-	93	93.750	Mesocricetus_auratus
MGP_CAROLIEiJ_G0014057	Mrpl30	95	73.684	ENSMAUG00000014813	-	94	73.684	Mesocricetus_auratus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	93.750	ENSMAUG00000021333	-	93	91.250	Mesocricetus_auratus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	86.719	ENSMICG00000011627	-	98	86.709	Microcebus_murinus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	94.375	ENSMOCG00000005615	Mrpl30	100	94.375	Microtus_ochrogaster
MGP_CAROLIEiJ_G0014057	Mrpl30	100	98.125	ENSMUSG00000026087	Mrpl30	100	98.125	Mus_musculus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	98.438	MGP_PahariEiJ_G0027303	Mrpl30	100	98.438	Mus_pahari
MGP_CAROLIEiJ_G0014057	Mrpl30	100	99.375	MGP_SPRETEiJ_G0014861	Mrpl30	100	99.375	Mus_spretus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	84.375	ENSMPUG00000011085	-	98	82.278	Mustela_putorius_furo
MGP_CAROLIEiJ_G0014057	Mrpl30	100	84.375	ENSMLUG00000029851	-	98	82.278	Myotis_lucifugus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	86.719	ENSNGAG00000020323	Mrpl30	100	86.250	Nannospalax_galili
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.938	ENSNLEG00000027490	-	98	86.709	Nomascus_leucogenys
MGP_CAROLIEiJ_G0014057	Mrpl30	100	86.719	ENSOPRG00000007331	-	96	84.375	Ochotona_princeps
MGP_CAROLIEiJ_G0014057	Mrpl30	100	83.594	ENSODEG00000019187	-	87	82.581	Octodon_degus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	78.906	ENSODEG00000018681	-	87	77.419	Octodon_degus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	84.375	ENSODEG00000006001	-	96	82.692	Octodon_degus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	82.812	ENSODEG00000009949	-	96	82.581	Octodon_degus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.156	ENSOCUG00000004111	-	98	86.076	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0014057	Mrpl30	98	75.159	ENSOGAG00000030016	-	97	75.159	Otolemur_garnettii
MGP_CAROLIEiJ_G0014057	Mrpl30	100	84.375	ENSOGAG00000002241	-	94	83.439	Otolemur_garnettii
MGP_CAROLIEiJ_G0014057	Mrpl30	99	79.528	ENSOGAG00000025954	-	99	76.730	Otolemur_garnettii
MGP_CAROLIEiJ_G0014057	Mrpl30	100	84.375	ENSOARG00000013442	-	99	83.019	Ovis_aries
MGP_CAROLIEiJ_G0014057	Mrpl30	99	85.443	ENSPPAG00000038932	-	98	85.443	Pan_paniscus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	86.719	ENSPPRG00000008888	-	98	85.443	Panthera_pardus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	86.719	ENSPTIG00000004998	-	98	85.443	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0014057	Mrpl30	99	85.443	ENSPTRG00000012275	-	98	85.443	Pan_troglodytes
MGP_CAROLIEiJ_G0014057	Mrpl30	100	87.500	ENSPANG00000033489	-	98	87.342	Papio_anubis
MGP_CAROLIEiJ_G0014057	Mrpl30	100	94.375	ENSPEMG00000018330	-	100	94.375	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0014057	Mrpl30	100	83.125	ENSPEMG00000007715	-	100	83.125	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.156	ENSPPYG00000019961	-	98	86.076	Pongo_abelii
MGP_CAROLIEiJ_G0014057	Mrpl30	100	89.844	ENSPCOG00000013471	-	98	88.608	Propithecus_coquereli
MGP_CAROLIEiJ_G0014057	Mrpl30	100	84.375	ENSPCOG00000000860	-	98	82.911	Propithecus_coquereli
MGP_CAROLIEiJ_G0014057	Mrpl30	100	84.375	ENSPVAG00000006587	-	92	81.646	Pteropus_vampyrus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	97.500	ENSRNOG00000049330	Mrpl30	100	97.500	Rattus_norvegicus
MGP_CAROLIEiJ_G0014057	Mrpl30	99	79.114	ENSRBIG00000041744	-	98	79.114	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.938	ENSRROG00000044692	-	98	86.709	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0014057	Mrpl30	100	87.500	ENSSBOG00000036412	-	98	87.975	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0014057	Mrpl30	87	56.835	ENSSPUG00000000679	-	66	56.835	Sphenodon_punctatus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	87.500	ENSSSCG00000008183	-	99	83.648	Sus_scrofa
MGP_CAROLIEiJ_G0014057	Mrpl30	100	86.719	ENSTTRG00000004937	-	91	83.544	Tursiops_truncatus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	84.375	ENSUAMG00000015567	-	98	82.911	Ursus_americanus
MGP_CAROLIEiJ_G0014057	Mrpl30	100	85.156	ENSUMAG00000008932	-	87	82.911	Ursus_maritimus