EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0014701 (Gene tree)
Gene ID: 110304705
Gene Symbol: Apobec4
Alias: 4933431M11Rik
Full Name: apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 6757 bases
Position: chr1:143493182-143499938
Accession: 110304705
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0020369	APOBEC_N	PF08210.11	5.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0020369	-	1577	XM_021176246	MGP_CAROLIEiJ_P0020369	374 (aa)	XP_021031905	UPI000A319CED

Gene Model

Click here to download MGP_CAROLIEiJ_G0014701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0014701's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0014701	Apobec4	94	63.056	ENSG00000173627	APOBEC4	100	62.500	Homo_sapiens
MGP_CAROLIEiJ_G0014701	Apobec4	94	65.278	ENSAMEG00000002503	APOBEC4	99	63.351	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0014701	Apobec4	91	50.575	ENSACAG00000015192	APOBEC4	98	50.575	Anolis_carolinensis
MGP_CAROLIEiJ_G0014701	Apobec4	93	63.662	ENSBTAG00000047395	APOBEC4	99	62.398	Bos_taurus
MGP_CAROLIEiJ_G0014701	Apobec4	94	62.222	ENSCJAG00000040026	APOBEC4	100	61.892	Callithrix_jacchus
MGP_CAROLIEiJ_G0014701	Apobec4	94	63.056	ENSCAFG00000013349	APOBEC4	100	62.500	Canis_familiaris
MGP_CAROLIEiJ_G0014701	Apobec4	94	63.056	ENSCAFG00020015526	APOBEC4	100	62.500	Canis_lupus_dingo
MGP_CAROLIEiJ_G0014701	Apobec4	93	63.793	ENSCHIG00000011987	APOBEC4	96	62.363	Capra_hircus
MGP_CAROLIEiJ_G0014701	Apobec4	94	62.535	ENSCSAG00000000243	APOBEC4	100	61.538	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0014701	Apobec4	96	61.413	ENSCHOG00000012387	APOBEC4	100	61.413	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0014701	Apobec4	95	47.514	ENSCPBG00000015714	APOBEC4	97	47.514	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0014701	Apobec4	89	71.856	ENSCGRG00001004553	Apobec4	96	71.856	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0014701	Apobec4	93	63.662	ENSDNOG00000044664	APOBEC4	99	62.192	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0014701	Apobec4	94	60.340	ENSDORG00000007335	Apobec4	100	60.340	Dipodomys_ordii
MGP_CAROLIEiJ_G0014701	Apobec4	94	64.722	ENSEASG00005006513	APOBEC4	99	63.686	Equus_asinus_asinus
MGP_CAROLIEiJ_G0014701	Apobec4	94	65.000	ENSECAG00000019734	APOBEC4	99	63.957	Equus_caballus
MGP_CAROLIEiJ_G0014701	Apobec4	94	64.167	ENSFCAG00000010909	APOBEC4	100	63.144	Felis_catus
MGP_CAROLIEiJ_G0014701	Apobec4	81	66.454	ENSFDAG00000018185	APOBEC4	98	66.454	Fukomys_damarensis
MGP_CAROLIEiJ_G0014701	Apobec4	83	48.318	ENSGALG00000053078	APOBEC4	92	48.318	Gallus_gallus
MGP_CAROLIEiJ_G0014701	Apobec4	94	63.056	ENSGGOG00000042217	APOBEC4	100	62.060	Gorilla_gorilla
MGP_CAROLIEiJ_G0014701	Apobec4	95	45.187	ENSLACG00000014504	APOBEC4	99	45.187	Latimeria_chalumnae
MGP_CAROLIEiJ_G0014701	Apobec4	94	63.099	ENSMMUG00000031303	APOBEC4	100	62.088	Macaca_mulatta
MGP_CAROLIEiJ_G0014701	Apobec4	84	47.516	ENSMGAG00000017190	APOBEC4	94	47.516	Meleagris_gallopavo
MGP_CAROLIEiJ_G0014701	Apobec4	100	95.989	ENSMUSG00000055547	Apobec4	100	95.989	Mus_musculus
MGP_CAROLIEiJ_G0014701	Apobec4	100	89.305	MGP_PahariEiJ_G0027937	Apobec4	100	89.305	Mus_pahari
MGP_CAROLIEiJ_G0014701	Apobec4	100	94.652	MGP_SPRETEiJ_G0015508	Apobec4	100	94.652	Mus_spretus
MGP_CAROLIEiJ_G0014701	Apobec4	97	63.587	ENSMPUG00000011756	APOBEC4	99	63.587	Mustela_putorius_furo
MGP_CAROLIEiJ_G0014701	Apobec4	93	64.507	ENSMLUG00000002458	APOBEC4	100	62.873	Myotis_lucifugus
MGP_CAROLIEiJ_G0014701	Apobec4	94	60.000	ENSNGAG00000017599	Apobec4	100	59.889	Nannospalax_galili
MGP_CAROLIEiJ_G0014701	Apobec4	94	63.611	ENSNLEG00000035610	APOBEC4	100	62.602	Nomascus_leucogenys
MGP_CAROLIEiJ_G0014701	Apobec4	86	63.975	ENSODEG00000009778	APOBEC4	96	63.415	Octodon_degus
MGP_CAROLIEiJ_G0014701	Apobec4	91	50.997	ENSOANG00000001000	APOBEC4	100	49.457	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0014701	Apobec4	94	64.444	ENSOGAG00000003118	APOBEC4	99	63.587	Otolemur_garnettii
MGP_CAROLIEiJ_G0014701	Apobec4	93	62.817	ENSOARG00000005287	APOBEC4	99	61.580	Ovis_aries
MGP_CAROLIEiJ_G0014701	Apobec4	94	62.500	ENSPPAG00000038272	APOBEC4	100	61.944	Pan_paniscus
MGP_CAROLIEiJ_G0014701	Apobec4	94	63.611	ENSPPRG00000014706	APOBEC4	100	62.602	Panthera_pardus
MGP_CAROLIEiJ_G0014701	Apobec4	94	63.611	ENSPTIG00000005518	APOBEC4	100	62.602	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0014701	Apobec4	94	62.222	ENSPTRG00000047181	APOBEC4	100	61.685	Pan_troglodytes
MGP_CAROLIEiJ_G0014701	Apobec4	93	73.699	ENSPEMG00000019164	Apobec4	100	72.981	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0014701	Apobec4	57	33.475	ENSPMAG00000006156	APOBEC4	64	33.475	Petromyzon_marinus
MGP_CAROLIEiJ_G0014701	Apobec4	91	56.268	ENSPCIG00000003817	APOBEC4	96	54.930	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0014701	Apobec4	94	62.778	ENSPPYG00000000424	APOBEC4	100	61.789	Pongo_abelii
MGP_CAROLIEiJ_G0014701	Apobec4	94	48.889	ENSPCAG00000015174	APOBEC4	100	48.780	Procavia_capensis
MGP_CAROLIEiJ_G0014701	Apobec4	94	65.000	ENSPVAG00000001100	APOBEC4	100	64.402	Pteropus_vampyrus
MGP_CAROLIEiJ_G0014701	Apobec4	100	78.133	ENSRNOG00000028089	Apobec4	97	78.133	Rattus_norvegicus
MGP_CAROLIEiJ_G0014701	Apobec4	91	53.561	ENSSHAG00000013804	APOBEC4	100	51.491	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0014701	Apobec4	94	46.995	ENSSPUG00000010884	APOBEC4	97	46.995	Sphenodon_punctatus
MGP_CAROLIEiJ_G0014701	Apobec4	96	62.125	ENSSSCG00000015561	APOBEC4	100	62.125	Sus_scrofa
MGP_CAROLIEiJ_G0014701	Apobec4	94	61.944	ENSTBEG00000006476	APOBEC4	100	61.308	Tupaia_belangeri
MGP_CAROLIEiJ_G0014701	Apobec4	94	64.067	ENSTTRG00000014784	APOBEC4	99	63.488	Tursiops_truncatus
MGP_CAROLIEiJ_G0014701	Apobec4	92	65.439	ENSUAMG00000005088	APOBEC4	100	63.859	Ursus_americanus
MGP_CAROLIEiJ_G0014701	Apobec4	92	65.439	ENSUMAG00000016285	APOBEC4	100	63.859	Ursus_maritimus
MGP_CAROLIEiJ_G0014701	Apobec4	94	63.333	ENSVVUG00000009054	APOBEC4	100	62.331	Vulpes_vulpes
MGP_CAROLIEiJ_G0014701	Apobec4	99	40.106	ENSXETG00000017441	apobec4	99	40.106	Xenopus_tropicalis