EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0014713 (Gene tree)
Gene ID: 110299705
Gene Symbol: Rnasel
Alias: 2-5A-dependent RNAase|E230029I04Rik
Full Name: ribonuclease L
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 16213 bases
Position: chr1:144487535-144503747
Accession: 110299705
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0020431	Ribonuc_2-5A	PF06479.12	1.5e-27	1	1
MGP_CAROLIEiJ_P0020427	Ribonuc_2-5A	PF06479.12	1.3e-26	1	1
MGP_CAROLIEiJ_P0020428	Ribonuc_2-5A	PF06479.12	6.6e-16	1	1
MGP_CAROLIEiJ_P0020429	Ribonuc_2-5A	PF06479.12	6.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0020428	-	2538	-	MGP_CAROLIEiJ_P0020428	671 (aa)	-	-
MGP_CAROLIEiJ_T0020429	-	2448	-	MGP_CAROLIEiJ_P0020429	671 (aa)	-	-
MGP_CAROLIEiJ_T0020431	-	2524	-	MGP_CAROLIEiJ_P0020431	224 (aa)	-	-
MGP_CAROLIEiJ_T0020430	-	4113	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0020432	-	318	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0020427	-	2907	-	MGP_CAROLIEiJ_P0020427	727 (aa)	XP_021025136	UPI000A31A1DD

Gene Model

Click here to download MGP_CAROLIEiJ_G0014713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0014713's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0014713	Rnasel	50	34.400	MGP_CAROLIEiJ_G0030977	Tnks	58	34.400

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0014713	Rnasel	97	68.636	ENSG00000135828	RNASEL	98	65.247	Homo_sapiens
MGP_CAROLIEiJ_G0014713	Rnasel	99	62.312	ENSAMEG00000007756	RNASEL	97	62.181	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0014713	Rnasel	96	41.463	ENSAPLG00000009854	RNASEL	99	40.993	Anas_platyrhynchos
MGP_CAROLIEiJ_G0014713	Rnasel	96	42.066	ENSACAG00000004961	RNASEL	98	42.222	Anolis_carolinensis
MGP_CAROLIEiJ_G0014713	Rnasel	98	65.060	ENSANAG00000036044	RNASEL	95	65.057	Aotus_nancymaae
MGP_CAROLIEiJ_G0014713	Rnasel	99	60.902	ENSBTAG00000009091	RNASEL	97	61.135	Bos_taurus
MGP_CAROLIEiJ_G0014713	Rnasel	99	66.418	ENSCJAG00000004725	RNASEL	98	65.479	Callithrix_jacchus
MGP_CAROLIEiJ_G0014713	Rnasel	99	61.955	ENSCAFG00000013121	RNASEL	97	61.986	Canis_familiaris
MGP_CAROLIEiJ_G0014713	Rnasel	99	61.955	ENSCAFG00020014858	RNASEL	98	61.955	Canis_lupus_dingo
MGP_CAROLIEiJ_G0014713	Rnasel	99	60.805	ENSCHIG00000021530	RNASEL	97	61.181	Capra_hircus
MGP_CAROLIEiJ_G0014713	Rnasel	99	61.813	ENSTSYG00000000281	RNASEL	96	62.272	Carlito_syrichta
MGP_CAROLIEiJ_G0014713	Rnasel	89	69.849	ENSCAPG00000002653	-	96	69.849	Cavia_aperea
MGP_CAROLIEiJ_G0014713	Rnasel	89	69.849	ENSCPOG00000025198	-	93	64.856	Cavia_porcellus
MGP_CAROLIEiJ_G0014713	Rnasel	99	65.067	ENSCCAG00000032500	RNASEL	97	64.315	Cebus_capucinus
MGP_CAROLIEiJ_G0014713	Rnasel	97	69.124	ENSCATG00000038808	RNASEL	98	64.325	Cercocebus_atys
MGP_CAROLIEiJ_G0014713	Rnasel	99	61.493	ENSCLAG00000011944	RNASEL	96	62.079	Chinchilla_lanigera
MGP_CAROLIEiJ_G0014713	Rnasel	96	68.981	ENSCSAG00000012514	RNASEL	98	64.876	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0014713	Rnasel	88	44.700	ENSCPBG00000015771	-	91	44.700	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0014713	Rnasel	99	44.461	ENSCPBG00000015776	-	98	44.290	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0014713	Rnasel	99	64.925	ENSCANG00000041251	RNASEL	98	65.634	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0014713	Rnasel	99	70.151	ENSCGRG00001008939	Rnasel	99	70.151	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0014713	Rnasel	99	70.151	ENSCGRG00000009259	Rnasel	99	70.151	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0014713	Rnasel	99	60.837	ENSDNOG00000017705	RNASEL	98	60.894	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0014713	Rnasel	89	68.966	ENSDORG00000005886	Rnasel	97	61.773	Dipodomys_ordii
MGP_CAROLIEiJ_G0014713	Rnasel	88	60.920	ENSETEG00000008370	RNASEL	86	59.843	Echinops_telfairi
MGP_CAROLIEiJ_G0014713	Rnasel	99	63.284	ENSEASG00005006600	RNASEL	99	63.077	Equus_asinus_asinus
MGP_CAROLIEiJ_G0014713	Rnasel	99	62.985	ENSECAG00000015188	RNASEL	99	62.885	Equus_caballus
MGP_CAROLIEiJ_G0014713	Rnasel	97	51.903	ENSEEUG00000011471	RNASEL	98	51.903	Erinaceus_europaeus
MGP_CAROLIEiJ_G0014713	Rnasel	99	63.063	ENSFCAG00000024554	RNASEL	97	62.890	Felis_catus
MGP_CAROLIEiJ_G0014713	Rnasel	98	39.761	ENSFALG00000008002	RNASEL	98	39.271	Ficedula_albicollis
MGP_CAROLIEiJ_G0014713	Rnasel	82	62.745	ENSFDAG00000016599	RNASEL	95	62.745	Fukomys_damarensis
MGP_CAROLIEiJ_G0014713	Rnasel	94	41.966	ENSGALG00000042986	RNASEL	97	41.449	Gallus_gallus
MGP_CAROLIEiJ_G0014713	Rnasel	96	69.725	ENSGGOG00000023414	RNASEL	98	65.110	Gorilla_gorilla
MGP_CAROLIEiJ_G0014713	Rnasel	99	61.848	ENSHGLG00100009841	RNASEL	99	61.848	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0014713	Rnasel	98	64.211	ENSSTOG00000007352	RNASEL	98	63.686	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0014713	Rnasel	95	73.239	ENSJJAG00000013606	Rnasel	97	54.746	Jaculus_jaculus
MGP_CAROLIEiJ_G0014713	Rnasel	94	41.014	ENSLACG00000000804	RNASEL	97	40.831	Latimeria_chalumnae
MGP_CAROLIEiJ_G0014713	Rnasel	99	58.333	ENSLAFG00000022307	RNASEL	96	58.840	Loxodonta_africana
MGP_CAROLIEiJ_G0014713	Rnasel	97	69.124	ENSMFAG00000044965	RNASEL	98	65.427	Macaca_fascicularis
MGP_CAROLIEiJ_G0014713	Rnasel	96	68.981	ENSMNEG00000032732	RNASEL	98	65.014	Macaca_nemestrina
MGP_CAROLIEiJ_G0014713	Rnasel	97	69.124	ENSMLEG00000037368	RNASEL	98	64.876	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0014713	Rnasel	98	40.686	ENSMGAG00000003316	RNASEL	98	40.140	Meleagris_gallopavo
MGP_CAROLIEiJ_G0014713	Rnasel	99	69.494	ENSMAUG00000020643	Rnasel	99	69.379	Mesocricetus_auratus
MGP_CAROLIEiJ_G0014713	Rnasel	99	63.718	ENSMICG00000026907	RNASEL	95	63.932	Microcebus_murinus
MGP_CAROLIEiJ_G0014713	Rnasel	95	73.239	ENSMOCG00000009828	Rnasel	99	69.199	Microtus_ochrogaster
MGP_CAROLIEiJ_G0014713	Rnasel	96	53.538	ENSMODG00000006829	RNASEL	92	53.957	Monodelphis_domestica
MGP_CAROLIEiJ_G0014713	Rnasel	99	92.825	ENSMUSG00000066800	Rnasel	99	92.846	Mus_musculus
MGP_CAROLIEiJ_G0014713	Rnasel	99	87.556	MGP_PahariEiJ_G0027949	Rnasel	99	87.363	Mus_pahari
MGP_CAROLIEiJ_G0014713	Rnasel	99	91.779	MGP_SPRETEiJ_G0015520	Rnasel	99	91.854	Mus_spretus
MGP_CAROLIEiJ_G0014713	Rnasel	99	61.642	ENSMPUG00000011522	RNASEL	97	61.549	Mustela_putorius_furo
MGP_CAROLIEiJ_G0014713	Rnasel	99	61.756	ENSMLUG00000010098	RNASEL	96	62.272	Myotis_lucifugus
MGP_CAROLIEiJ_G0014713	Rnasel	97	68.636	ENSNLEG00000018010	RNASEL	98	65.110	Nomascus_leucogenys
MGP_CAROLIEiJ_G0014713	Rnasel	99	61.550	ENSODEG00000002238	RNASEL	96	62.166	Octodon_degus
MGP_CAROLIEiJ_G0014713	Rnasel	97	52.656	ENSOANG00000000982	RNASEL	99	52.436	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0014713	Rnasel	99	53.423	ENSOCUG00000015922	RNASEL	96	53.759	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0014713	Rnasel	98	62.952	ENSOGAG00000002612	RNASEL	97	62.083	Otolemur_garnettii
MGP_CAROLIEiJ_G0014713	Rnasel	99	61.053	ENSOARG00000018978	RNASEL	98	60.443	Ovis_aries
MGP_CAROLIEiJ_G0014713	Rnasel	96	69.725	ENSPPAG00000029542	RNASEL	98	65.247	Pan_paniscus
MGP_CAROLIEiJ_G0014713	Rnasel	99	62.913	ENSPPRG00000003895	RNASEL	97	62.748	Panthera_pardus
MGP_CAROLIEiJ_G0014713	Rnasel	99	62.012	ENSPTIG00000017036	RNASEL	97	61.898	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0014713	Rnasel	96	69.725	ENSPTRG00000001755	RNASEL	98	65.385	Pan_troglodytes
MGP_CAROLIEiJ_G0014713	Rnasel	97	68.664	ENSPANG00000016769	RNASEL	98	64.050	Papio_anubis
MGP_CAROLIEiJ_G0014713	Rnasel	98	46.439	ENSPSIG00000007735	-	98	46.027	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0014713	Rnasel	99	42.625	ENSPSIG00000008045	-	98	42.458	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0014713	Rnasel	99	73.661	ENSPEMG00000012855	Rnasel	99	73.425	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0014713	Rnasel	96	52.859	ENSPCIG00000018112	RNASEL	95	52.685	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0014713	Rnasel	96	68.807	ENSPPYG00000000435	RNASEL	98	65.247	Pongo_abelii
MGP_CAROLIEiJ_G0014713	Rnasel	87	67.692	ENSPCAG00000015612	-	56	62.918	Procavia_capensis
MGP_CAROLIEiJ_G0014713	Rnasel	99	63.229	ENSPCOG00000013879	RNASEL	96	63.188	Propithecus_coquereli
MGP_CAROLIEiJ_G0014713	Rnasel	99	61.791	ENSPVAG00000010445	RNASEL	97	61.898	Pteropus_vampyrus
MGP_CAROLIEiJ_G0014713	Rnasel	99	81.982	ENSRNOG00000027017	Rnasel	99	78.552	Rattus_norvegicus
MGP_CAROLIEiJ_G0014713	Rnasel	96	68.981	ENSRBIG00000044741	RNASEL	98	65.152	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0014713	Rnasel	96	68.981	ENSRROG00000035978	RNASEL	98	65.014	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0014713	Rnasel	98	65.113	ENSSBOG00000034574	RNASEL	98	63.798	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0014713	Rnasel	99	60.264	ENSSSCG00000015549	RNASEL	96	60.388	Sus_scrofa
MGP_CAROLIEiJ_G0014713	Rnasel	81	76.744	ENSTBEG00000004013	RNASEL	79	71.951	Tupaia_belangeri
MGP_CAROLIEiJ_G0014713	Rnasel	94	63.981	ENSTTRG00000007635	RNASEL	97	58.114	Tursiops_truncatus
MGP_CAROLIEiJ_G0014713	Rnasel	99	62.913	ENSUMAG00000016510	RNASEL	97	62.748	Ursus_maritimus
MGP_CAROLIEiJ_G0014713	Rnasel	99	62.556	ENSVVUG00000008895	RNASEL	97	62.556	Vulpes_vulpes