EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0014874 (Gene tree)
Gene ID: 110299590
Gene Symbol: Alyref2
Alias: C130042O11Rik|Refbp2
Full Name: aly/REF export factor 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 1315 bases
Position: chr1:161760332-161761646
Accession: 110299590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0021222	RRM_1	PF00076.22	4.1e-11	1	1
MGP_CAROLIEiJ_P0021222	FYTT	PF07078.11	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0021222	-	1315	-	MGP_CAROLIEiJ_P0021222	223 (aa)	XP_021024966	UPI000A314CE4

Gene Model

Click here to download MGP_CAROLIEiJ_G0014874's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0014874's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.588	MGP_CAROLIEiJ_G0017529	Alyref	100	74.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.817	ENSG00000183684	ALYREF	97	73.930	Homo_sapiens
MGP_CAROLIEiJ_G0014874	Alyref2	100	56.777	ENSAPOG00000018455	ALYREF	100	60.806	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0014874	Alyref2	87	73.039	ENSAMEG00000017463	ALYREF	83	75.000	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0014874	Alyref2	87	78.571	ENSACAG00000010526	ALYREF	100	67.188	Anolis_carolinensis
MGP_CAROLIEiJ_G0014874	Alyref2	88	77.000	ENSANAG00000022638	-	80	75.000	Aotus_nancymaae
MGP_CAROLIEiJ_G0014874	Alyref2	100	71.749	ENSANAG00000028229	-	77	74.888	Aotus_nancymaae
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.817	ENSBTAG00000008498	ALYREF	100	74.319	Bos_taurus
MGP_CAROLIEiJ_G0014874	Alyref2	100	69.261	ENSCJAG00000039942	ALYREF	97	73.930	Callithrix_jacchus
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.039	ENSCAFG00000005877	ALYREF	100	73.541	Canis_familiaris
MGP_CAROLIEiJ_G0014874	Alyref2	100	73.684	ENSCAFG00020009815	ALYREF	100	78.509	Canis_lupus_dingo
MGP_CAROLIEiJ_G0014874	Alyref2	98	85.268	ENSCHIG00000017396	ALYREF	91	87.054	Capra_hircus
MGP_CAROLIEiJ_G0014874	Alyref2	91	77.941	ENSTSYG00000002272	ALYREF	84	77.941	Carlito_syrichta
MGP_CAROLIEiJ_G0014874	Alyref2	59	74.436	ENSCAPG00000014727	-	100	79.137	Cavia_aperea
MGP_CAROLIEiJ_G0014874	Alyref2	100	85.965	ENSCPOG00000013710	ALYREF	100	86.404	Cavia_porcellus
MGP_CAROLIEiJ_G0014874	Alyref2	100	74.439	ENSCCAG00000030237	-	100	78.027	Cebus_capucinus
MGP_CAROLIEiJ_G0014874	Alyref2	100	71.984	ENSCCAG00000020578	-	97	73.930	Cebus_capucinus
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.428	ENSCATG00000033169	ALYREF	97	73.541	Cercocebus_atys
MGP_CAROLIEiJ_G0014874	Alyref2	100	79.372	ENSCLAG00000015026	ALYREF	100	82.143	Chinchilla_lanigera
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.428	ENSCSAG00000002216	ALYREF	97	73.541	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0014874	Alyref2	82	80.000	ENSCANG00000034056	ALYREF	98	77.895	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0014874	Alyref2	100	79.295	ENSCGRG00001018191	-	100	82.969	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0014874	Alyref2	83	75.532	ENSCGRG00000015871	-	100	73.301	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0014874	Alyref2	70	55.249	ENSCSEG00000015438	-	98	56.906	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0014874	Alyref2	78	78.090	ENSDNOG00000002563	ALYREF	95	70.667	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0014874	Alyref2	79	78.212	ENSDORG00000025849	-	73	80.447	Dipodomys_ordii
MGP_CAROLIEiJ_G0014874	Alyref2	78	80.682	ENSETEG00000016596	ALYREF	100	80.114	Echinops_telfairi
MGP_CAROLIEiJ_G0014874	Alyref2	98	75.000	ENSEASG00005005824	ALYREF	90	79.911	Equus_asinus_asinus
MGP_CAROLIEiJ_G0014874	Alyref2	98	75.000	ENSECAG00000018754	ALYREF	90	79.911	Equus_caballus
MGP_CAROLIEiJ_G0014874	Alyref2	63	71.930	ENSEEUG00000010164	ALYREF	100	76.608	Erinaceus_europaeus
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.817	ENSFCAG00000022549	ALYREF	98	74.319	Felis_catus
MGP_CAROLIEiJ_G0014874	Alyref2	88	80.102	ENSFDAG00000001213	ALYREF	91	81.122	Fukomys_damarensis
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.588	ENSGALG00000007237	ALYREF	100	71.373	Gallus_gallus
MGP_CAROLIEiJ_G0014874	Alyref2	100	60.000	ENSGACG00000013328	ALYREF	100	61.154	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0014874	Alyref2	100	69.767	ENSGAGG00000008536	ALYREF	100	70.543	Gopherus_agassizii
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.817	ENSGGOG00000013935	ALYREF	99	73.643	Gorilla_gorilla
MGP_CAROLIEiJ_G0014874	Alyref2	100	81.858	ENSHGLG00000008293	ALYREF	100	85.022	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0014874	Alyref2	93	66.222	ENSHGLG00100006949	ALYREF	95	68.610	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0014874	Alyref2	100	60.448	ENSHCOG00000015046	ALYREF	100	59.176	Hippocampus_comes
MGP_CAROLIEiJ_G0014874	Alyref2	100	71.373	ENSJJAG00000004134	-	100	72.549	Jaculus_jaculus
MGP_CAROLIEiJ_G0014874	Alyref2	100	64.093	ENSLACG00000005694	ALYREF	100	67.954	Latimeria_chalumnae
MGP_CAROLIEiJ_G0014874	Alyref2	83	79.144	ENSLAFG00000003083	ALYREF	100	81.818	Loxodonta_africana
MGP_CAROLIEiJ_G0014874	Alyref2	100	69.600	ENSMFAG00000001394	ALYREF	97	73.307	Macaca_fascicularis
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.428	ENSMMUG00000012884	ALYREF	97	73.541	Macaca_mulatta
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.428	ENSMNEG00000043666	ALYREF	97	73.541	Macaca_nemestrina
MGP_CAROLIEiJ_G0014874	Alyref2	87	79.275	ENSMLEG00000043353	ALYREF	87	78.610	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0014874	Alyref2	100	79.372	ENSMAUG00000020552	-	100	79.372	Mesocricetus_auratus
MGP_CAROLIEiJ_G0014874	Alyref2	100	69.922	ENSMICG00000017403	ALYREF	97	73.047	Microcebus_murinus
MGP_CAROLIEiJ_G0014874	Alyref2	100	80.717	ENSMOCG00000016792	-	100	82.960	Microtus_ochrogaster
MGP_CAROLIEiJ_G0014874	Alyref2	99	70.428	ENSMODG00000003030	ALYREF	84	72.763	Monodelphis_domestica
MGP_CAROLIEiJ_G0014874	Alyref2	100	61.993	ENSMALG00000019408	ALYREF	100	60.741	Monopterus_albus
MGP_CAROLIEiJ_G0014874	Alyref2	100	55.594	ENSMUSG00000096640	Gm4312	62	67.416	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.588	ENSMUSG00000025134	Alyref	100	74.118	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	100	66.529	ENSMUSG00000086727	4931428L18Rik	100	61.826	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	100	63.985	ENSMUSG00000097550	Gm21304	100	57.471	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	87	66.190	ENSMUSG00000112856	Gm4305	62	68.539	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	100	63.019	ENSMUSG00000090854	Gm4340	100	56.604	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	87	66.190	ENSMUSG00000096744	Gm4307	62	68.539	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	100	63.985	ENSMUSG00000094144	Gm21312	100	57.471	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	100	63.985	ENSMUSG00000097878	Gm8764	98	69.231	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	100	65.289	ENSMUSG00000117091	AC153137.1	100	61.411	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	100	55.594	ENSMUSG00000094314	Gm4301	62	67.416	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	100	63.985	ENSMUSG00000091779	Gm21293	100	61.654	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	100	63.985	ENSMUSG00000097427	Gm6763	98	69.231	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	100	63.985	ENSMUSG00000095022	Gm20765	100	57.471	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	87	66.190	ENSMUSG00000112931	Gm4303	62	68.539	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	87	66.351	ENSMUSG00000091101	Gm4302	61	68.539	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	100	95.516	ENSMUSG00000060244	Alyref2	100	95.516	Mus_musculus
MGP_CAROLIEiJ_G0014874	Alyref2	81	69.681	MGP_PahariEiJ_G0027255	-	79	69.663	Mus_pahari
MGP_CAROLIEiJ_G0014874	Alyref2	81	69.681	MGP_PahariEiJ_G0027254	-	81	69.663	Mus_pahari
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.588	MGP_PahariEiJ_G0018655	-	100	74.118	Mus_pahari
MGP_CAROLIEiJ_G0014874	Alyref2	71	75.000	MGP_PahariEiJ_G0018656	-	99	78.191	Mus_pahari
MGP_CAROLIEiJ_G0014874	Alyref2	78	54.425	MGP_SPRETEiJ_G0016590	-	54	68.852	Mus_spretus
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.588	MGP_SPRETEiJ_G0018373	Alyref	100	74.118	Mus_spretus
MGP_CAROLIEiJ_G0014874	Alyref2	100	95.067	MGP_SPRETEiJ_G0015679	Alyref2	100	95.067	Mus_spretus
MGP_CAROLIEiJ_G0014874	Alyref2	99	60.166	ENSMLUG00000030407	-	78	60.000	Myotis_lucifugus
MGP_CAROLIEiJ_G0014874	Alyref2	83	74.731	ENSMLUG00000009555	-	68	77.419	Myotis_lucifugus
MGP_CAROLIEiJ_G0014874	Alyref2	99	54.023	ENSMLUG00000002626	-	99	53.725	Myotis_lucifugus
MGP_CAROLIEiJ_G0014874	Alyref2	99	58.298	ENSMLUG00000024447	-	77	59.389	Myotis_lucifugus
MGP_CAROLIEiJ_G0014874	Alyref2	99	59.664	ENSMLUG00000026271	-	80	59.483	Myotis_lucifugus
MGP_CAROLIEiJ_G0014874	Alyref2	99	59.751	ENSMLUG00000027352	-	79	62.069	Myotis_lucifugus
MGP_CAROLIEiJ_G0014874	Alyref2	99	61.826	ENSMLUG00000025677	-	78	59.574	Myotis_lucifugus
MGP_CAROLIEiJ_G0014874	Alyref2	99	52.227	ENSMLUG00000024471	-	82	54.772	Myotis_lucifugus
MGP_CAROLIEiJ_G0014874	Alyref2	99	63.900	ENSMLUG00000027516	-	80	64.681	Myotis_lucifugus
MGP_CAROLIEiJ_G0014874	Alyref2	99	59.494	ENSMLUG00000024976	-	80	59.483	Myotis_lucifugus
MGP_CAROLIEiJ_G0014874	Alyref2	99	55.602	ENSMLUG00000022869	-	82	56.170	Myotis_lucifugus
MGP_CAROLIEiJ_G0014874	Alyref2	100	43.333	ENSMLUG00000023213	-	67	52.542	Myotis_lucifugus
MGP_CAROLIEiJ_G0014874	Alyref2	98	51.852	ENSMLUG00000015043	-	98	55.696	Myotis_lucifugus
MGP_CAROLIEiJ_G0014874	Alyref2	88	52.857	ENSMLUG00000028343	-	97	53.431	Myotis_lucifugus
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.817	ENSNLEG00000010313	ALYREF	97	73.930	Nomascus_leucogenys
MGP_CAROLIEiJ_G0014874	Alyref2	91	58.095	ENSMEUG00000002210	ALYREF	92	60.664	Notamacropus_eugenii
MGP_CAROLIEiJ_G0014874	Alyref2	59	78.947	ENSOPRG00000005551	-	52	77.444	Ochotona_princeps
MGP_CAROLIEiJ_G0014874	Alyref2	100	69.615	ENSODEG00000008359	ALYREF	100	73.077	Octodon_degus
MGP_CAROLIEiJ_G0014874	Alyref2	100	60.223	ENSORLG00000012331	ALYREF	100	60.223	Oryzias_latipes
MGP_CAROLIEiJ_G0014874	Alyref2	79	77.528	ENSOGAG00000012409	ALYREF	85	73.892	Otolemur_garnettii
MGP_CAROLIEiJ_G0014874	Alyref2	78	78.652	ENSOARG00000017932	ALYREF	83	70.136	Ovis_aries
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.817	ENSPPRG00000010829	ALYREF	98	74.319	Panthera_pardus
MGP_CAROLIEiJ_G0014874	Alyref2	55	89.344	ENSPTIG00000006399	ALYREF	68	89.344	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.817	ENSPTRG00000009774	ALYREF	97	73.930	Pan_troglodytes
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.428	ENSPANG00000019265	ALYREF	97	73.541	Papio_anubis
MGP_CAROLIEiJ_G0014874	Alyref2	57	74.242	ENSPSIG00000017541	ALYREF	97	75.000	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.428	ENSPPYG00000008749	ALYREF	97	73.930	Pongo_abelii
MGP_CAROLIEiJ_G0014874	Alyref2	100	69.922	ENSPCOG00000020874	ALYREF	97	73.047	Propithecus_coquereli
MGP_CAROLIEiJ_G0014874	Alyref2	100	62.992	ENSPVAG00000017866	ALYREF	100	65.234	Pteropus_vampyrus
MGP_CAROLIEiJ_G0014874	Alyref2	64	71.676	ENSRNOG00000036687	Alyref	91	76.744	Rattus_norvegicus
MGP_CAROLIEiJ_G0014874	Alyref2	80	76.243	ENSRBIG00000039651	ALYREF	74	77.901	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0014874	Alyref2	91	75.238	ENSRROG00000045364	ALYREF	81	79.612	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0014874	Alyref2	83	75.789	ENSSHAG00000010459	ALYREF	98	77.895	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0014874	Alyref2	100	50.566	ENSSDUG00000003992	-	98	50.575	Seriola_dumerili
MGP_CAROLIEiJ_G0014874	Alyref2	100	50.382	ENSSLDG00000005386	-	98	50.775	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0014874	Alyref2	100	68.217	ENSSPUG00000004600	ALYREF	100	70.543	Sphenodon_punctatus
MGP_CAROLIEiJ_G0014874	Alyref2	100	58.394	ENSSPAG00000011178	ALYREF	96	59.630	Stegastes_partitus
MGP_CAROLIEiJ_G0014874	Alyref2	100	71.484	ENSSSCG00000032655	ALYREF	100	74.219	Sus_scrofa
MGP_CAROLIEiJ_G0014874	Alyref2	57	75.573	ENSTGUG00000003513	ALYREF	97	75.573	Taeniopygia_guttata
MGP_CAROLIEiJ_G0014874	Alyref2	100	60.300	ENSTRUG00000008828	ALYREF	100	60.526	Takifugu_rubripes
MGP_CAROLIEiJ_G0014874	Alyref2	78	78.090	ENSTBEG00000005834	ALYREF	100	80.337	Tupaia_belangeri
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.039	ENSTTRG00000012275	ALYREF	100	73.541	Tursiops_truncatus
MGP_CAROLIEiJ_G0014874	Alyref2	78	69.143	ENSUAMG00000016931	ALYREF	65	65.896	Ursus_americanus
MGP_CAROLIEiJ_G0014874	Alyref2	78	69.143	ENSUMAG00000016384	ALYREF	65	73.143	Ursus_maritimus
MGP_CAROLIEiJ_G0014874	Alyref2	100	70.886	ENSXETG00000005391	alyref	100	71.308	Xenopus_tropicalis