EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0014962 (Gene tree)
Gene ID: 110297467
Gene Symbol: Hnrnpu
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 13401 bases
Position: chr1:168194356-168207756
Accession: 110297467
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0021514	SAP	PF02037.27	2.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0021518	-	690	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0021515	-	707	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0021514	-	7617	-	MGP_CAROLIEiJ_P0021514	799 (aa)	XP_021021894	UPI000A316878
MGP_CAROLIEiJ_T0021517	-	868	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0021516	-	802	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0014962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0014962's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0014962	Hnrnpu	55	59.091	MGP_CAROLIEiJ_G0029381	Hnrnpul1	61	52.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.283	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0014962	Hnrnpu	75	56.672	ENSAPOG00000017400	hnrnpub	81	59.133	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	92.092	ENSAMEG00000009145	HNRNPU	100	92.701	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0014962	Hnrnpu	99	50.305	ENSACIG00000012138	hnrnpub	88	80.851	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0014962	Hnrnpu	99	51.744	ENSAOCG00000015843	hnrnpub	81	59.133	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0014962	Hnrnpu	99	51.744	ENSAPEG00000014679	hnrnpub	81	59.133	Amphiprion_percula
MGP_CAROLIEiJ_G0014962	Hnrnpu	69	61.593	ENSATEG00000016178	hnrnpub	72	59.504	Anabas_testudineus
MGP_CAROLIEiJ_G0014962	Hnrnpu	80	83.558	ENSACAG00000004511	HNRNPU	72	89.517	Anolis_carolinensis
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.259	ENSANAG00000033895	-	100	96.259	Aotus_nancymaae
MGP_CAROLIEiJ_G0014962	Hnrnpu	81	78.723	ENSACLG00000008165	hnrnpub	86	78.723	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0014962	Hnrnpu	98	96.456	ENSBTAG00000007606	HNRNPU	98	96.456	Bos_taurus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	93.947	ENSCJAG00000016914	HNRNPU	100	93.947	Callithrix_jacchus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.530	ENSCAFG00020000918	HNRNPU	100	96.530	Canis_lupus_dingo
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.530	ENSCHIG00000004900	HNRNPU	100	96.530	Capra_hircus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	94.532	ENSCPOG00000011887	HNRNPU	100	94.532	Cavia_porcellus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.259	ENSCCAG00000037859	-	100	96.259	Cebus_capucinus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.384	ENSCATG00000035273	HNRNPU	100	96.384	Cercocebus_atys
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	94.775	ENSCLAG00000007100	HNRNPU	100	94.775	Chinchilla_lanigera
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	95.911	ENSCSAG00000009219	HNRNPU	100	95.911	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0014962	Hnrnpu	81	93.333	ENSCHOG00000001387	HNRNPU	79	93.333	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	77.712	ENSCPBG00000009415	HNRNPU	98	79.950	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	92.768	ENSCANG00000022780	HNRNPU	100	93.267	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	98.750	ENSCGRG00001020525	Hnrnpu	100	98.750	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0014962	Hnrnpu	70	65.625	ENSCSEG00000010804	hnrnpub	86	78.261	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0014962	Hnrnpu	82	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0014962	Hnrnpu	75	61.715	ENSDARG00000004735	hnrnpub	81	59.299	Danio_rerio
MGP_CAROLIEiJ_G0014962	Hnrnpu	81	64.706	ENSDARG00000015206	hnrnpua	89	64.706	Danio_rerio
MGP_CAROLIEiJ_G0014962	Hnrnpu	82	99.160	ENSDNOG00000000215	HNRNPU	91	99.160	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	92.777	ENSDORG00000015491	Hnrnpu	100	92.653	Dipodomys_ordii
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	91.563	ENSETEG00000014565	HNRNPU	100	91.563	Echinops_telfairi
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.406	ENSEASG00005003017	HNRNPU	100	96.406	Equus_asinus_asinus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.283	ENSECAG00000007955	HNRNPU	100	96.283	Equus_caballus
MGP_CAROLIEiJ_G0014962	Hnrnpu	99	50.925	ENSELUG00000011966	hnrnpua	79	58.902	Esox_lucius
MGP_CAROLIEiJ_G0014962	Hnrnpu	76	56.860	ENSELUG00000010733	hnrnpub	82	56.675	Esox_lucius
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.278	ENSFCAG00000002156	HNRNPU	99	96.278	Felis_catus
MGP_CAROLIEiJ_G0014962	Hnrnpu	83	98.822	ENSFDAG00000006026	HNRNPU	100	98.822	Fukomys_damarensis
MGP_CAROLIEiJ_G0014962	Hnrnpu	75	54.082	ENSFHEG00000022639	hnrnpub	62	60.259	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0014962	Hnrnpu	75	58.400	ENSGMOG00000001755	hnrnpub	99	52.920	Gadus_morhua
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	78.420	ENSGALG00000010671	HNRNPU	100	77.621	Gallus_gallus
MGP_CAROLIEiJ_G0014962	Hnrnpu	59	64.043	ENSGAFG00000009369	hnrnpub	79	56.317	Gambusia_affinis
MGP_CAROLIEiJ_G0014962	Hnrnpu	83	56.894	ENSGACG00000004679	hnrnpub	99	50.592	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.259	ENSGGOG00000004061	HNRNPU	100	96.259	Gorilla_gorilla
MGP_CAROLIEiJ_G0014962	Hnrnpu	81	78.723	ENSHBUG00000012290	hnrnpub	86	78.723	Haplochromis_burtoni
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.642	ENSHGLG00000010594	-	100	96.642	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0014962	Hnrnpu	82	99.160	ENSHGLG00100015093	HNRNPU	100	99.160	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0014962	Hnrnpu	75	51.965	ENSHCOG00000020091	hnrnpub	78	51.940	Hippocampus_comes
MGP_CAROLIEiJ_G0014962	Hnrnpu	73	83.721	ENSIPUG00000007749	hnrnpu	92	68.421	Ictalurus_punctatus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	94.282	ENSJJAG00000011371	Hnrnpu	100	94.282	Jaculus_jaculus
MGP_CAROLIEiJ_G0014962	Hnrnpu	76	54.665	ENSKMAG00000004532	hnrnpub	80	55.038	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0014962	Hnrnpu	75	56.399	ENSLBEG00000022520	hnrnpub	80	57.035	Labrus_bergylta
MGP_CAROLIEiJ_G0014962	Hnrnpu	99	61.916	ENSLACG00000017463	HNRNPU	99	62.236	Latimeria_chalumnae
MGP_CAROLIEiJ_G0014962	Hnrnpu	83	64.638	ENSLOCG00000016652	hnrnpua	99	58.768	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.005	ENSLAFG00000021377	HNRNPU	100	96.005	Loxodonta_africana
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.384	ENSMFAG00000037308	HNRNPU	100	96.384	Macaca_fascicularis
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.509	ENSMMUG00000021098	HNRNPU	100	96.509	Macaca_mulatta
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.384	ENSMNEG00000043645	HNRNPU	100	96.384	Macaca_nemestrina
MGP_CAROLIEiJ_G0014962	Hnrnpu	81	78.723	ENSMZEG00005003185	hnrnpub	86	78.723	Maylandia_zebra
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	99.000	ENSMAUG00000008842	Hnrnpu	100	99.000	Mesocricetus_auratus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.629	ENSMICG00000004616	HNRNPU	100	96.629	Microcebus_murinus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	98.750	ENSMOCG00000015623	Hnrnpu	100	98.750	Microtus_ochrogaster
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	87.662	ENSMODG00000006515	HNRNPU	100	87.309	Monodelphis_domestica
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	99.875	ENSMUSG00000039630	Hnrnpu	100	99.875	Mus_musculus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	99.001	MGP_PahariEiJ_G0028193	Hnrnpu	100	99.001	Mus_pahari
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	99.875	MGP_SPRETEiJ_G0015761	Hnrnpu	100	99.875	Mus_spretus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	87.856	ENSMLUG00000000475	HNRNPU	100	88.366	Myotis_lucifugus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	97.628	ENSNGAG00000019075	Hnrnpu	100	97.628	Nannospalax_galili
MGP_CAROLIEiJ_G0014962	Hnrnpu	81	78.723	ENSNBRG00000017855	hnrnpub	86	78.723	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0014962	Hnrnpu	99	85.145	ENSMEUG00000000541	HNRNPU	100	84.903	Notamacropus_eugenii
MGP_CAROLIEiJ_G0014962	Hnrnpu	69	95.588	ENSODEG00000014458	-	100	95.588	Octodon_degus
MGP_CAROLIEiJ_G0014962	Hnrnpu	81	78.723	ENSONIG00000001260	hnrnpub	89	78.723	Oreochromis_niloticus
MGP_CAROLIEiJ_G0014962	Hnrnpu	98	94.190	ENSOCUG00000014469	HNRNPU	93	94.190	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0014962	Hnrnpu	75	56.567	ENSORLG00020005363	hnrnpub	80	55.860	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0014962	Hnrnpu	75	56.418	ENSORLG00015001190	hnrnpub	80	55.708	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0014962	Hnrnpu	80	83.721	ENSOMEG00000014951	hnrnpub	86	83.721	Oryzias_melastigma
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.402	ENSOGAG00000014024	HNRNPU	100	96.402	Otolemur_garnettii
MGP_CAROLIEiJ_G0014962	Hnrnpu	83	98.492	ENSOARG00000004985	HNRNPU	91	98.490	Ovis_aries
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.758	ENSPPAG00000038652	HNRNPU	100	96.758	Pan_paniscus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	93.947	ENSPPRG00000002662	HNRNPU	100	93.947	Panthera_pardus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.758	ENSPTRG00000002182	HNRNPU	100	96.758	Pan_troglodytes
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.384	ENSPANG00000011643	HNRNPU	100	96.384	Papio_anubis
MGP_CAROLIEiJ_G0014962	Hnrnpu	75	64.363	ENSPKIG00000006885	hnrnpua	78	66.667	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0014962	Hnrnpu	99	57.725	ENSPKIG00000022332	hnrnpub	78	64.697	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	89.976	ENSPCIG00000008657	HNRNPU	98	91.092	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0014962	Hnrnpu	59	64.043	ENSPFOG00000002908	hnrnpub	80	56.402	Poecilia_formosa
MGP_CAROLIEiJ_G0014962	Hnrnpu	76	54.185	ENSPLAG00000004160	hnrnpub	80	56.575	Poecilia_latipinna
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	91.067	ENSPCOG00000003883	-	100	90.571	Propithecus_coquereli
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	95.019	ENSPCOG00000018655	-	100	94.894	Propithecus_coquereli
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	93.947	ENSPVAG00000002581	HNRNPU	100	93.947	Pteropus_vampyrus
MGP_CAROLIEiJ_G0014962	Hnrnpu	81	78.723	ENSPNYG00000021642	hnrnpub	86	78.723	Pundamilia_nyererei
MGP_CAROLIEiJ_G0014962	Hnrnpu	99	56.978	ENSPNAG00000001055	hnrnpub	79	64.353	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	99.250	ENSRNOG00000033790	Hnrnpu	100	99.250	Rattus_norvegicus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	95.761	ENSRBIG00000031519	HNRNPU	100	95.761	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.035	ENSRROG00000041642	HNRNPU	100	96.035	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0014962	Hnrnpu	99	57.343	ENSSFOG00015001124	hnrnpub	78	64.264	Scleropages_formosus
MGP_CAROLIEiJ_G0014962	Hnrnpu	94	60.367	ENSSFOG00015019004	hnrnpu	98	59.033	Scleropages_formosus
MGP_CAROLIEiJ_G0014962	Hnrnpu	69	61.593	ENSSMAG00000003607	hnrnpub	77	54.255	Scophthalmus_maximus
MGP_CAROLIEiJ_G0014962	Hnrnpu	75	55.198	ENSSDUG00000005912	hnrnpub	79	56.372	Seriola_dumerili
MGP_CAROLIEiJ_G0014962	Hnrnpu	75	55.051	ENSSLDG00000004899	hnrnpub	79	56.222	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	77.658	ENSSPUG00000011393	HNRNPU	100	78.486	Sphenodon_punctatus
MGP_CAROLIEiJ_G0014962	Hnrnpu	69	61.279	ENSSPAG00000011853	hnrnpub	99	50.281	Stegastes_partitus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.283	ENSSSCG00000010877	HNRNPU	100	96.283	Sus_scrofa
MGP_CAROLIEiJ_G0014962	Hnrnpu	71	61.034	ENSTRUG00000007759	hnrnpub	79	55.539	Takifugu_rubripes
MGP_CAROLIEiJ_G0014962	Hnrnpu	80	76.744	ENSTNIG00000009725	hnrnpub	90	76.744	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0014962	Hnrnpu	70	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	94.310	ENSUAMG00000021120	HNRNPU	100	94.310	Ursus_americanus
MGP_CAROLIEiJ_G0014962	Hnrnpu	99	84.944	ENSUMAG00000012322	HNRNPU	97	94.662	Ursus_maritimus
MGP_CAROLIEiJ_G0014962	Hnrnpu	80	92.481	ENSVPAG00000010520	HNRNPU	91	92.481	Vicugna_pacos
MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.530	ENSVVUG00000026524	HNRNPU	100	96.530	Vulpes_vulpes
MGP_CAROLIEiJ_G0014962	Hnrnpu	99	67.319	ENSXETG00000011386	hnrnpu	99	68.530	Xenopus_tropicalis
MGP_CAROLIEiJ_G0014962	Hnrnpu	76	53.382	ENSXMAG00000010356	hnrnpub	80	56.402	Xiphophorus_maculatus