EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0014978 (Gene tree)
Gene ID: 110285057
Gene Symbol: Parp1
Alias: 5830444G22Rik|Adprp|Adprt1|PARP|parp-1|sPARP-1
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 32529 bases
Position: chr1:170437183-170469711
Accession: 110285057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0021609	PARP	PF00644.20	2.4e-72	1	1
MGP_CAROLIEiJ_P0021614	PARP	PF00644.20	1.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0021612	-	862	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0021613	-	750	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0021610	-	356	-	MGP_CAROLIEiJ_P0021610	67 (aa)	-	UPI00053BD62F
MGP_CAROLIEiJ_T0021611	-	549	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0021614	-	477	-	MGP_CAROLIEiJ_P0021614	98 (aa)	-	-
MGP_CAROLIEiJ_T0021609	-	3872	XM_021151105	MGP_CAROLIEiJ_P0021609	1014 (aa)	XP_021006764	UPI000A31577D
MGP_CAROLIEiJ_T0021608	-	391	-	MGP_CAROLIEiJ_P0021608	68 (aa)	-	UPI00053BD7CE

Gene Model

Click here to download MGP_CAROLIEiJ_G0014978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0014978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0014978	Parp1	51	33.026	MGP_CAROLIEiJ_G0032625	Parp3	100	33.764

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0014978	Parp1	100	93.878	ENSG00000143799	PARP1	100	92.315	Homo_sapiens
MGP_CAROLIEiJ_G0014978	Parp1	100	76.531	ENSAPOG00000006414	parp1	100	70.254	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0014978	Parp1	100	95.918	ENSAMEG00000014451	PARP1	100	90.122	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0014978	Parp1	100	76.531	ENSACIG00000005651	parp1	100	69.284	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0014978	Parp1	100	75.510	ENSAOCG00000021005	parp1	100	70.323	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0014978	Parp1	100	75.510	ENSAPEG00000004784	parp1	100	70.127	Amphiprion_percula
MGP_CAROLIEiJ_G0014978	Parp1	100	76.531	ENSATEG00000010457	parp1	99	69.360	Anabas_testudineus
MGP_CAROLIEiJ_G0014978	Parp1	100	85.714	ENSAPLG00000014039	PARP1	100	78.912	Anas_platyrhynchos
MGP_CAROLIEiJ_G0014978	Parp1	100	85.714	ENSACAG00000006189	PARP1	100	76.059	Anolis_carolinensis
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSANAG00000032699	PARP1	100	92.118	Aotus_nancymaae
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSACLG00000015489	parp1	100	71.034	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0014978	Parp1	100	75.510	ENSAMXG00000006465	parp1	100	68.416	Astyanax_mexicanus
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSBTAG00000000837	PARP1	100	88.605	Bos_taurus
MGP_CAROLIEiJ_G0014978	Parp1	100	40.000	WBGene00004049	parp-1	100	46.360	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0014978	Parp1	100	97.959	ENSCJAG00000012831	PARP1	100	92.020	Callithrix_jacchus
MGP_CAROLIEiJ_G0014978	Parp1	100	97.959	ENSCAFG00000016089	PARP1	100	91.470	Canis_familiaris
MGP_CAROLIEiJ_G0014978	Parp1	100	97.959	ENSCAFG00020001660	PARP1	100	91.429	Canis_lupus_dingo
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSCHIG00000018072	PARP1	100	88.703	Capra_hircus
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSTSYG00000003699	PARP1	100	91.196	Carlito_syrichta
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSCAPG00000011113	-	99	75.904	Cavia_aperea
MGP_CAROLIEiJ_G0014978	Parp1	100	97.959	ENSCPOG00000015643	-	100	91.921	Cavia_porcellus
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSCCAG00000033484	PARP1	100	92.020	Cebus_capucinus
MGP_CAROLIEiJ_G0014978	Parp1	100	94.898	ENSCATG00000038981	PARP1	100	92.512	Cercocebus_atys
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSCLAG00000006637	PARP1	100	91.232	Chinchilla_lanigera
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSCHOG00000003539	PARP1	66	96.875	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0014978	Parp1	100	86.735	ENSCPBG00000011958	PARP1	100	78.269	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0014978	Parp1	100	62.745	ENSCING00000019384	-	100	59.831	Ciona_intestinalis
MGP_CAROLIEiJ_G0014978	Parp1	100	61.765	ENSCSAVG00000004652	-	98	63.462	Ciona_savignyi
MGP_CAROLIEiJ_G0014978	Parp1	100	95.918	ENSCANG00000041340	PARP1	100	92.000	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0014978	Parp1	100	100.000	ENSCGRG00001020559	Parp1	100	96.548	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0014978	Parp1	100	100.000	ENSCGRG00000004864	Parp1	100	96.407	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0014978	Parp1	100	74.490	ENSCSEG00000020665	parp1	99	76.923	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSCVAG00000021372	parp1	99	69.200	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0014978	Parp1	100	74.490	ENSDARG00000019529	parp1	100	69.178	Danio_rerio
MGP_CAROLIEiJ_G0014978	Parp1	100	92.857	ENSDNOG00000012059	PARP1	100	89.506	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0014978	Parp1	100	93.878	ENSDORG00000005234	Parp1	100	88.718	Dipodomys_ordii
MGP_CAROLIEiJ_G0014978	Parp1	100	57.576	FBgn0010247	Parp	99	41.569	Drosophila_melanogaster
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSETEG00000013254	PARP1	88	97.656	Echinops_telfairi
MGP_CAROLIEiJ_G0014978	Parp1	100	67.347	ENSEBUG00000005820	parp1	100	57.673	Eptatretus_burgeri
MGP_CAROLIEiJ_G0014978	Parp1	100	94.898	ENSEASG00005013275	PARP1	99	91.583	Equus_asinus_asinus
MGP_CAROLIEiJ_G0014978	Parp1	100	94.898	ENSECAG00000019207	PARP1	100	91.823	Equus_caballus
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSEEUG00000012253	PARP1	100	87.230	Erinaceus_europaeus
MGP_CAROLIEiJ_G0014978	Parp1	100	79.592	ENSELUG00000017336	parp1	100	69.655	Esox_lucius
MGP_CAROLIEiJ_G0014978	Parp1	100	95.918	ENSFCAG00000005777	PARP1	100	91.030	Felis_catus
MGP_CAROLIEiJ_G0014978	Parp1	100	84.694	ENSFALG00000011578	PARP1	100	77.175	Ficedula_albicollis
MGP_CAROLIEiJ_G0014978	Parp1	100	95.918	ENSFDAG00000017662	PARP1	100	90.256	Fukomys_damarensis
MGP_CAROLIEiJ_G0014978	Parp1	100	77.551	ENSFHEG00000001117	parp1	99	70.108	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0014978	Parp1	100	72.449	ENSGMOG00000014929	parp1	99	69.163	Gadus_morhua
MGP_CAROLIEiJ_G0014978	Parp1	100	86.735	ENSGALG00000009228	PARP1	100	78.094	Gallus_gallus
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSGAFG00000010450	parp1	100	69.863	Gambusia_affinis
MGP_CAROLIEiJ_G0014978	Parp1	100	74.490	ENSGACG00000011280	parp1	100	68.945	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0014978	Parp1	100	88.776	ENSGAGG00000010066	PARP1	100	77.461	Gopherus_agassizii
MGP_CAROLIEiJ_G0014978	Parp1	100	93.878	ENSGGOG00000006308	PARP1	100	91.921	Gorilla_gorilla
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSHBUG00000010490	parp1	100	70.911	Haplochromis_burtoni
MGP_CAROLIEiJ_G0014978	Parp1	100	94.898	ENSHGLG00000003992	PARP1	93	89.344	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0014978	Parp1	100	94.898	ENSHGLG00100016965	PARP1	93	89.344	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0014978	Parp1	100	74.490	ENSHCOG00000011619	parp1	100	68.324	Hippocampus_comes
MGP_CAROLIEiJ_G0014978	Parp1	100	76.531	ENSIPUG00000020250	parp1	100	68.380	Ictalurus_punctatus
MGP_CAROLIEiJ_G0014978	Parp1	100	98.980	ENSSTOG00000016000	PARP1	100	92.414	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0014978	Parp1	100	98.980	ENSJJAG00000023497	Parp1	100	92.906	Jaculus_jaculus
MGP_CAROLIEiJ_G0014978	Parp1	100	76.531	ENSKMAG00000011627	parp1	100	69.961	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0014978	Parp1	100	76.531	ENSLBEG00000013376	parp1	100	69.804	Labrus_bergylta
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSLACG00000002735	PARP1	100	59.078	Latimeria_chalumnae
MGP_CAROLIEiJ_G0014978	Parp1	100	76.531	ENSLOCG00000015798	parp1	100	71.709	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSLAFG00000007830	PARP1	100	88.615	Loxodonta_africana
MGP_CAROLIEiJ_G0014978	Parp1	100	95.918	ENSMFAG00000002526	PARP1	100	92.414	Macaca_fascicularis
MGP_CAROLIEiJ_G0014978	Parp1	100	95.918	ENSMMUG00000021820	PARP1	100	92.512	Macaca_mulatta
MGP_CAROLIEiJ_G0014978	Parp1	100	95.918	ENSMNEG00000034074	PARP1	100	92.611	Macaca_nemestrina
MGP_CAROLIEiJ_G0014978	Parp1	100	90.177	ENSMLEG00000012344	PARP1	100	90.472	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSMAMG00000020652	parp1	100	70.501	Mastacembelus_armatus
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSMZEG00005016907	parp1	100	71.107	Maylandia_zebra
MGP_CAROLIEiJ_G0014978	Parp1	100	86.735	ENSMGAG00000007760	PARP1	100	77.857	Meleagris_gallopavo
MGP_CAROLIEiJ_G0014978	Parp1	100	100.000	ENSMAUG00000008306	Parp1	100	96.548	Mesocricetus_auratus
MGP_CAROLIEiJ_G0014978	Parp1	100	88.473	ENSMICG00000017076	PARP1	100	88.768	Microcebus_murinus
MGP_CAROLIEiJ_G0014978	Parp1	100	97.959	ENSMOCG00000014315	Parp1	100	95.661	Microtus_ochrogaster
MGP_CAROLIEiJ_G0014978	Parp1	100	76.531	ENSMMOG00000015966	parp1	100	69.412	Mola_mola
MGP_CAROLIEiJ_G0014978	Parp1	100	92.857	ENSMODG00000006076	PARP1	100	82.711	Monodelphis_domestica
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSMALG00000004057	parp1	100	67.805	Monopterus_albus
MGP_CAROLIEiJ_G0014978	Parp1	100	100.000	ENSMUSG00000026496	Parp1	100	99.507	Mus_musculus
MGP_CAROLIEiJ_G0014978	Parp1	100	100.000	MGP_PahariEiJ_G0028209	-	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0014978	Parp1	100	100.000	MGP_SPRETEiJ_G0015777	Parp1	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0014978	Parp1	100	90.816	ENSMPUG00000004585	PARP1	100	90.148	Mustela_putorius_furo
MGP_CAROLIEiJ_G0014978	Parp1	90	74.726	ENSMLUG00000012285	PARP1	100	74.945	Myotis_lucifugus
MGP_CAROLIEiJ_G0014978	Parp1	100	100.000	ENSNGAG00000003885	Parp1	100	94.477	Nannospalax_galili
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSNBRG00000017434	parp1	100	71.034	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSNLEG00000013905	PARP1	100	94.180	Nomascus_leucogenys
MGP_CAROLIEiJ_G0014978	Parp1	100	92.857	ENSMEUG00000007720	PARP1	87	91.940	Notamacropus_eugenii
MGP_CAROLIEiJ_G0014978	Parp1	100	97.959	ENSOPRG00000011722	PARP1	100	91.330	Ochotona_princeps
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSODEG00000007424	PARP1	100	87.980	Octodon_degus
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSONIG00000013486	parp1	100	70.911	Oreochromis_niloticus
MGP_CAROLIEiJ_G0014978	Parp1	100	94.898	ENSOANG00000001488	PARP1	100	82.311	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSOCUG00000017820	PARP1	100	91.634	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSORLG00000013691	parp1	100	69.193	Oryzias_latipes
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSORLG00020001074	parp1	99	68.976	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSORLG00015007090	parp1	100	69.388	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0014978	Parp1	69	70.588	ENSOMEG00000007822	parp1	96	70.380	Oryzias_melastigma
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSOGAG00000016206	PARP1	100	90.246	Otolemur_garnettii
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSOARG00000000811	PARP1	100	88.900	Ovis_aries
MGP_CAROLIEiJ_G0014978	Parp1	100	92.857	ENSPPAG00000040862	PARP1	100	91.823	Pan_paniscus
MGP_CAROLIEiJ_G0014978	Parp1	100	95.918	ENSPPRG00000003528	PARP1	100	91.077	Panthera_pardus
MGP_CAROLIEiJ_G0014978	Parp1	91	96.629	ENSPTIG00000009102	PARP1	98	77.263	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0014978	Parp1	100	92.857	ENSPTRG00000002049	PARP1	100	91.823	Pan_troglodytes
MGP_CAROLIEiJ_G0014978	Parp1	100	95.918	ENSPANG00000011198	PARP1	100	92.717	Papio_anubis
MGP_CAROLIEiJ_G0014978	Parp1	100	77.551	ENSPKIG00000006039	parp1	100	70.167	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0014978	Parp1	100	87.755	ENSPSIG00000016374	PARP1	100	77.189	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0014978	Parp1	100	69.388	ENSPMGG00000008936	parp1	100	66.375	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0014978	Parp1	100	100.000	ENSPEMG00000020230	Parp1	100	96.351	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0014978	Parp1	100	92.857	ENSPCIG00000006436	PARP1	100	82.924	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSPFOG00000002342	parp1	99	69.783	Poecilia_formosa
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSPLAG00000000909	parp1	99	70.432	Poecilia_latipinna
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSPMEG00000013979	parp1	99	70.669	Poecilia_mexicana
MGP_CAROLIEiJ_G0014978	Parp1	100	79.592	ENSPREG00000001114	parp1	99	70.571	Poecilia_reticulata
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSPPYG00000000164	PARP1	100	92.497	Pongo_abelii
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSPCAG00000005558	-	65	95.062	Procavia_capensis
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSPCOG00000016918	PARP1	100	92.118	Propithecus_coquereli
MGP_CAROLIEiJ_G0014978	Parp1	100	94.898	ENSPVAG00000005543	PARP1	92	95.755	Pteropus_vampyrus
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSPNYG00000009702	parp1	100	71.034	Pundamilia_nyererei
MGP_CAROLIEiJ_G0014978	Parp1	100	77.551	ENSPNAG00000002787	parp1	100	69.612	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0014978	Parp1	100	97.959	ENSRNOG00000003084	Parp1	100	96.943	Rattus_norvegicus
MGP_CAROLIEiJ_G0014978	Parp1	100	95.918	ENSRBIG00000044893	PARP1	100	92.315	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0014978	Parp1	100	73.469	ENSRROG00000040615	-	100	67.883	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0014978	Parp1	100	95.918	ENSRROG00000029280	PARP1	100	92.315	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSSBOG00000010144	PARP1	100	92.020	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0014978	Parp1	100	93.878	ENSSHAG00000001991	PARP1	100	83.828	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0014978	Parp1	100	79.592	ENSSFOG00015020017	parp1	100	70.674	Scleropages_formosus
MGP_CAROLIEiJ_G0014978	Parp1	100	75.510	ENSSMAG00000013799	parp1	100	69.833	Scophthalmus_maximus
MGP_CAROLIEiJ_G0014978	Parp1	100	76.531	ENSSDUG00000016626	parp1	100	69.344	Seriola_dumerili
MGP_CAROLIEiJ_G0014978	Parp1	100	76.531	ENSSLDG00000006384	parp1	100	69.344	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0014978	Parp1	100	95.918	ENSSARG00000009436	-	59	94.444	Sorex_araneus
MGP_CAROLIEiJ_G0014978	Parp1	100	74.114	ENSSPUG00000007790	PARP1	100	74.409	Sphenodon_punctatus
MGP_CAROLIEiJ_G0014978	Parp1	100	68.106	ENSSPAG00000019074	parp1	100	69.979	Stegastes_partitus
MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	ENSSSCG00000023660	PARP1	100	90.542	Sus_scrofa
MGP_CAROLIEiJ_G0014978	Parp1	100	85.714	ENSTGUG00000004260	-	100	78.024	Taeniopygia_guttata
MGP_CAROLIEiJ_G0014978	Parp1	100	75.510	ENSTRUG00000014490	parp1	100	68.725	Takifugu_rubripes
MGP_CAROLIEiJ_G0014978	Parp1	100	75.510	ENSTNIG00000016384	parp1	100	68.555	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0014978	Parp1	100	97.959	ENSTBEG00000002364	PARP1	92	91.489	Tupaia_belangeri
MGP_CAROLIEiJ_G0014978	Parp1	100	95.918	ENSTTRG00000000188	PARP1	100	84.631	Tursiops_truncatus
MGP_CAROLIEiJ_G0014978	Parp1	100	95.918	ENSUAMG00000014388	PARP1	100	90.779	Ursus_americanus
MGP_CAROLIEiJ_G0014978	Parp1	93	93.407	ENSUMAG00000014555	PARP1	99	81.034	Ursus_maritimus
MGP_CAROLIEiJ_G0014978	Parp1	100	95.918	ENSVPAG00000011411	PARP1	84	96.863	Vicugna_pacos
MGP_CAROLIEiJ_G0014978	Parp1	100	97.959	ENSVVUG00000001655	PARP1	100	91.367	Vulpes_vulpes
MGP_CAROLIEiJ_G0014978	Parp1	100	73.469	ENSXETG00000022610	parp1	99	72.836	Xenopus_tropicalis
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSXCOG00000004611	parp1	100	73.508	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	ENSXMAG00000003632	parp1	99	69.685	Xiphophorus_maculatus