EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015030 (Gene tree)
Gene ID: 110291275
Gene Symbol: Gpatch2
Alias: 5830433G22Rik|5830436K05Rik|Gpatc2
Full Name: G-patch domain containing 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 146466 bases
Position: chr1:177059250-177205715
Accession: 110291275
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0021837	G-patch	PF01585.23	2.8e-16	1	1
MGP_CAROLIEiJ_P0021842	G-patch	PF01585.23	2.9e-16	1	1
MGP_CAROLIEiJ_P0021836	G-patch	PF01585.23	3.1e-16	1	1
MGP_CAROLIEiJ_P0021841	G-patch	PF01585.23	3.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0021836	-	4558	-	MGP_CAROLIEiJ_P0021836	527 (aa)	XP_021013981	UPI000A317A0F
MGP_CAROLIEiJ_T0021837	-	4712	-	MGP_CAROLIEiJ_P0021837	490 (aa)	-	-
MGP_CAROLIEiJ_T0021834	-	2407	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0021835	-	2865	-	MGP_CAROLIEiJ_P0021835	389 (aa)	-	-
MGP_CAROLIEiJ_T0021838	-	1963	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0021839	-	1641	XM_021158378	MGP_CAROLIEiJ_P0021839	375 (aa)	XP_021014037	UPI000A3147A0
MGP_CAROLIEiJ_T0021842	-	3846	-	MGP_CAROLIEiJ_P0021842	504 (aa)	XP_021014004	UPI000A31810B
MGP_CAROLIEiJ_T0021841	-	1584	-	MGP_CAROLIEiJ_P0021841	527 (aa)	XP_021013981	UPI000A317A0F
MGP_CAROLIEiJ_T0021840	-	1375	-	MGP_CAROLIEiJ_P0021840	300 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0015030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015030	Gpatch2	100	84.921	ENSG00000092978	GPATCH2	100	84.470	Homo_sapiens
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.516	ENSAMEG00000000532	GPATCH2	100	85.038	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015030	Gpatch2	96	51.048	ENSACIG00000017628	si:ch73-21k16.4	99	52.571	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0015030	Gpatch2	96	49.412	ENSAOCG00000020838	si:ch73-21k16.4	99	51.566	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0015030	Gpatch2	97	52.407	ENSAPEG00000007324	si:ch73-21k16.4	99	52.198	Amphiprion_percula
MGP_CAROLIEiJ_G0015030	Gpatch2	83	73.786	ENSATEG00000003701	si:ch73-21k16.4	99	73.786	Anabas_testudineus
MGP_CAROLIEiJ_G0015030	Gpatch2	96	73.511	ENSAPLG00000005559	GPATCH2	99	73.535	Anas_platyrhynchos
MGP_CAROLIEiJ_G0015030	Gpatch2	96	71.458	ENSACAG00000014945	GPATCH2	94	70.866	Anolis_carolinensis
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.714	ENSANAG00000032851	GPATCH2	100	85.227	Aotus_nancymaae
MGP_CAROLIEiJ_G0015030	Gpatch2	97	51.184	ENSACLG00000008706	si:ch73-21k16.4	99	52.641	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015030	Gpatch2	96	56.238	ENSAMXG00000001662	si:ch73-21k16.4	97	57.752	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.347	ENSBTAG00000001574	GPATCH2	100	84.877	Bos_taurus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.714	ENSCJAG00000047537	GPATCH2	91	85.227	Callithrix_jacchus
MGP_CAROLIEiJ_G0015030	Gpatch2	99	86.056	ENSCAFG00000010781	GPATCH2	99	85.551	Canis_familiaris
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.347	ENSCHIG00000018042	GPATCH2	100	84.877	Capra_hircus
MGP_CAROLIEiJ_G0015030	Gpatch2	99	83.865	ENSCAPG00000007843	GPATCH2	99	84.024	Cavia_aperea
MGP_CAROLIEiJ_G0015030	Gpatch2	99	84.064	ENSCPOG00000003966	GPATCH2	99	83.650	Cavia_porcellus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.913	ENSCCAG00000010195	GPATCH2	100	85.417	Cebus_capucinus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	82.540	ENSCATG00000038238	GPATCH2	100	82.197	Cercocebus_atys
MGP_CAROLIEiJ_G0015030	Gpatch2	99	84.064	ENSCLAG00000009274	GPATCH2	99	83.650	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015030	Gpatch2	96	73.511	ENSCPBG00000013037	GPATCH2	99	72.978	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.516	ENSCANG00000031261	GPATCH2	100	85.038	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	90.873	ENSCGRG00001024577	Gpatch2	100	90.650	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015030	Gpatch2	100	90.873	ENSCGRG00000015039	Gpatch2	100	91.102	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015030	Gpatch2	96	52.682	ENSCSEG00000002545	si:ch73-21k16.4	98	53.759	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0015030	Gpatch2	96	52.008	ENSCVAG00000006306	si:ch73-21k16.4	98	53.846	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015030	Gpatch2	96	55.375	ENSDARG00000101260	GPATCH2	97	55.728	Danio_rerio
MGP_CAROLIEiJ_G0015030	Gpatch2	57	87.413	ENSDNOG00000000826	GPATCH2	100	87.413	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015030	Gpatch2	99	85.657	ENSDORG00000030155	Gpatch2	99	85.799	Dipodomys_ordii
MGP_CAROLIEiJ_G0015030	Gpatch2	100	79.563	ENSETEG00000012316	GPATCH2	100	79.167	Echinops_telfairi
MGP_CAROLIEiJ_G0015030	Gpatch2	79	42.615	ENSEBUG00000014275	si:ch73-21k16.4	99	41.948	Eptatretus_burgeri
MGP_CAROLIEiJ_G0015030	Gpatch2	100	86.508	ENSEASG00005003507	GPATCH2	100	85.985	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	86.508	ENSECAG00000013263	GPATCH2	100	85.985	Equus_caballus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	78.978	ENSEEUG00000008748	GPATCH2	99	79.688	Erinaceus_europaeus
MGP_CAROLIEiJ_G0015030	Gpatch2	97	55.618	ENSELUG00000004934	si:ch73-21k16.4	99	55.618	Esox_lucius
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.913	ENSFCAG00000007129	GPATCH2	99	85.417	Felis_catus
MGP_CAROLIEiJ_G0015030	Gpatch2	96	73.156	ENSFALG00000012223	GPATCH2	99	72.638	Ficedula_albicollis
MGP_CAROLIEiJ_G0015030	Gpatch2	99	83.267	ENSFDAG00000011026	GPATCH2	99	83.267	Fukomys_damarensis
MGP_CAROLIEiJ_G0015030	Gpatch2	78	59.140	ENSFHEG00000008699	si:ch73-21k16.4	89	59.140	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0015030	Gpatch2	80	54.762	ENSGMOG00000001595	si:ch73-21k16.4	81	60.000	Gadus_morhua
MGP_CAROLIEiJ_G0015030	Gpatch2	96	73.101	ENSGALG00000009627	GPATCH2	99	72.584	Gallus_gallus
MGP_CAROLIEiJ_G0015030	Gpatch2	96	52.390	ENSGAFG00000005041	si:ch73-21k16.4	97	53.947	Gambusia_affinis
MGP_CAROLIEiJ_G0015030	Gpatch2	97	54.442	ENSGACG00000013427	si:ch73-21k16.4	100	55.766	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0015030	Gpatch2	96	74.538	ENSGAGG00000013122	GPATCH2	99	73.964	Gopherus_agassizii
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.317	ENSGGOG00000009440	GPATCH2	100	84.848	Gorilla_gorilla
MGP_CAROLIEiJ_G0015030	Gpatch2	97	51.184	ENSHBUG00000014399	si:ch73-21k16.4	99	52.641	Haplochromis_burtoni
MGP_CAROLIEiJ_G0015030	Gpatch2	99	83.665	ENSHGLG00000019513	GPATCH2	99	83.080	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015030	Gpatch2	99	83.665	ENSHGLG00100003689	GPATCH2	99	83.080	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015030	Gpatch2	96	54.451	ENSHCOG00000011331	si:ch73-21k16.4	99	54.451	Hippocampus_comes
MGP_CAROLIEiJ_G0015030	Gpatch2	96	45.567	ENSIPUG00000012840	si:ch73-21k16.4	99	46.901	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	87.103	ENSSTOG00000024959	GPATCH2	100	86.553	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	82.051	ENSJJAG00000019244	Gpatch2	98	81.382	Jaculus_jaculus
MGP_CAROLIEiJ_G0015030	Gpatch2	97	51.743	ENSLBEG00000008187	si:ch73-21k16.4	99	53.028	Labrus_bergylta
MGP_CAROLIEiJ_G0015030	Gpatch2	96	71.663	ENSLACG00000013951	GPATCH2	99	70.646	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015030	Gpatch2	97	62.305	ENSLOCG00000016058	si:ch73-21k16.4	99	61.914	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0015030	Gpatch2	99	84.692	ENSLAFG00000003787	GPATCH2	100	84.843	Loxodonta_africana
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.714	ENSMFAG00000000617	GPATCH2	100	85.227	Macaca_fascicularis
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.714	ENSMMUG00000014946	GPATCH2	100	85.227	Macaca_mulatta
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.714	ENSMNEG00000034969	GPATCH2	100	85.227	Macaca_nemestrina
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.714	ENSMLEG00000032285	GPATCH2	100	85.227	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015030	Gpatch2	97	51.913	ENSMAMG00000015684	si:ch73-21k16.4	99	53.636	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015030	Gpatch2	97	51.184	ENSMZEG00005015040	si:ch73-21k16.4	99	52.641	Maylandia_zebra
MGP_CAROLIEiJ_G0015030	Gpatch2	64	70.588	ENSMGAG00000009428	GPATCH2	99	70.588	Meleagris_gallopavo
MGP_CAROLIEiJ_G0015030	Gpatch2	100	90.204	ENSMAUG00000004851	Gpatch2	100	90.204	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015030	Gpatch2	99	86.853	ENSMICG00000037090	GPATCH2	99	86.312	Microcebus_murinus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	90.476	ENSMOCG00000020821	Gpatch2	100	90.000	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015030	Gpatch2	97	52.863	ENSMMOG00000015329	si:ch73-21k16.4	99	54.198	Mola_mola
MGP_CAROLIEiJ_G0015030	Gpatch2	96	77.823	ENSMODG00000004195	GPATCH2	96	75.238	Monodelphis_domestica
MGP_CAROLIEiJ_G0015030	Gpatch2	96	52.063	ENSMALG00000016801	si:ch73-21k16.4	99	51.866	Monopterus_albus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	97.154	ENSMUSG00000039210	Gpatch2	100	97.154	Mus_musculus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	94.694	MGP_PahariEiJ_G0028262	Gpatch2	100	94.694	Mus_pahari
MGP_CAROLIEiJ_G0015030	Gpatch2	100	97.154	MGP_SPRETEiJ_G0015830	Gpatch2	100	97.154	Mus_spretus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	86.111	ENSMPUG00000004269	GPATCH2	100	85.417	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015030	Gpatch2	100	84.127	ENSNGAG00000002207	Gpatch2	100	82.591	Nannospalax_galili
MGP_CAROLIEiJ_G0015030	Gpatch2	97	47.794	ENSNBRG00000020932	si:ch73-21k16.4	99	50.383	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.119	ENSNLEG00000014201	GPATCH2	100	84.659	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015030	Gpatch2	99	69.583	ENSMEUG00000012239	GPATCH2	99	69.822	Notamacropus_eugenii
MGP_CAROLIEiJ_G0015030	Gpatch2	99	81.474	ENSOPRG00000010126	GPATCH2	99	81.369	Ochotona_princeps
MGP_CAROLIEiJ_G0015030	Gpatch2	99	82.072	ENSODEG00000014927	GPATCH2	99	81.749	Octodon_degus
MGP_CAROLIEiJ_G0015030	Gpatch2	97	52.908	ENSONIG00000000570	si:ch73-21k16.4	100	54.409	Oreochromis_niloticus
MGP_CAROLIEiJ_G0015030	Gpatch2	95	78.431	ENSOANG00000008549	GPATCH2	100	71.800	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0015030	Gpatch2	99	85.259	ENSOCUG00000014512	GPATCH2	99	84.791	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0015030	Gpatch2	96	50.763	ENSORLG00000016810	si:ch73-21k16.4	98	52.622	Oryzias_latipes
MGP_CAROLIEiJ_G0015030	Gpatch2	96	50.669	ENSORLG00020003127	si:ch73-21k16.4	98	52.533	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0015030	Gpatch2	96	50.382	ENSORLG00015022304	si:ch73-21k16.4	98	52.247	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015030	Gpatch2	96	51.149	ENSOMEG00000017809	si:ch73-21k16.4	99	52.682	Oryzias_melastigma
MGP_CAROLIEiJ_G0015030	Gpatch2	99	87.052	ENSOGAG00000004485	GPATCH2	99	86.502	Otolemur_garnettii
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.347	ENSOARG00000011440	GPATCH2	100	84.877	Ovis_aries
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.119	ENSPPAG00000038887	GPATCH2	100	84.659	Pan_paniscus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	86.310	ENSPPRG00000013363	GPATCH2	99	85.795	Panthera_pardus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.119	ENSPTRG00000001986	GPATCH2	100	84.659	Pan_troglodytes
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.516	ENSPANG00000020943	GPATCH2	100	85.038	Papio_anubis
MGP_CAROLIEiJ_G0015030	Gpatch2	96	59.714	ENSPKIG00000004245	si:ch73-21k16.4	97	59.519	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015030	Gpatch2	96	73.511	ENSPSIG00000005373	GPATCH2	99	72.978	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015030	Gpatch2	97	48.983	ENSPMGG00000000611	si:ch73-21k16.4	99	50.575	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	91.667	ENSPEMG00000018364	Gpatch2	100	91.737	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0015030	Gpatch2	99	77.734	ENSPCIG00000027888	GPATCH2	99	76.850	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015030	Gpatch2	97	52.015	ENSPFOG00000008062	si:ch73-21k16.4	99	53.480	Poecilia_formosa
MGP_CAROLIEiJ_G0015030	Gpatch2	97	52.015	ENSPLAG00000022219	si:ch73-21k16.4	99	53.480	Poecilia_latipinna
MGP_CAROLIEiJ_G0015030	Gpatch2	97	52.015	ENSPMEG00000010687	si:ch73-21k16.4	99	53.537	Poecilia_mexicana
MGP_CAROLIEiJ_G0015030	Gpatch2	97	50.182	ENSPREG00000011915	si:ch73-21k16.4	99	51.825	Poecilia_reticulata
MGP_CAROLIEiJ_G0015030	Gpatch2	100	79.365	ENSPPYG00000000216	GPATCH2	100	79.167	Pongo_abelii
MGP_CAROLIEiJ_G0015030	Gpatch2	97	69.057	ENSPCAG00000013998	GPATCH2	100	69.371	Procavia_capensis
MGP_CAROLIEiJ_G0015030	Gpatch2	99	83.826	ENSPVAG00000010649	GPATCH2	99	83.427	Pteropus_vampyrus
MGP_CAROLIEiJ_G0015030	Gpatch2	97	51.184	ENSPNYG00000014144	si:ch73-21k16.4	99	52.641	Pundamilia_nyererei
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.516	ENSRROG00000012833	GPATCH2	100	85.038	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015030	Gpatch2	99	84.861	ENSSBOG00000028891	GPATCH2	99	84.411	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015030	Gpatch2	93	78.118	ENSSHAG00000015123	GPATCH2	97	78.118	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015030	Gpatch2	96	59.674	ENSSFOG00015000674	gpatch2	97	59.163	Scleropages_formosus
MGP_CAROLIEiJ_G0015030	Gpatch2	97	53.125	ENSSMAG00000009585	si:ch73-21k16.4	99	54.412	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015030	Gpatch2	97	51.460	ENSSDUG00000011998	si:ch73-21k16.4	99	53.005	Seriola_dumerili
MGP_CAROLIEiJ_G0015030	Gpatch2	97	51.642	ENSSLDG00000025385	si:ch73-21k16.4	99	53.188	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015030	Gpatch2	99	82.470	ENSSARG00000013063	GPATCH2	99	82.643	Sorex_araneus
MGP_CAROLIEiJ_G0015030	Gpatch2	97	51.648	ENSSPAG00000023569	si:ch73-21k16.4	99	53.114	Stegastes_partitus
MGP_CAROLIEiJ_G0015030	Gpatch2	99	85.288	ENSSSCG00000027207	GPATCH2	99	84.820	Sus_scrofa
MGP_CAROLIEiJ_G0015030	Gpatch2	97	53.734	ENSTRUG00000015569	si:ch73-21k16.4	99	53.285	Takifugu_rubripes
MGP_CAROLIEiJ_G0015030	Gpatch2	96	54.776	ENSTNIG00000016304	si:ch73-21k16.4	98	54.563	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0015030	Gpatch2	60	100.000	ENSTBEG00000012337	-	62	100.000	Tupaia_belangeri
MGP_CAROLIEiJ_G0015030	Gpatch2	83	86.364	ENSTTRG00000003739	GPATCH2	83	86.364	Tursiops_truncatus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	86.111	ENSUMAG00000020588	GPATCH2	100	86.111	Ursus_maritimus
MGP_CAROLIEiJ_G0015030	Gpatch2	100	83.168	ENSVPAG00000005192	GPATCH2	100	82.798	Vicugna_pacos
MGP_CAROLIEiJ_G0015030	Gpatch2	100	85.714	ENSVVUG00000012998	GPATCH2	100	85.227	Vulpes_vulpes
MGP_CAROLIEiJ_G0015030	Gpatch2	97	68.902	ENSXETG00000021194	gpatch2	95	68.938	Xenopus_tropicalis
MGP_CAROLIEiJ_G0015030	Gpatch2	96	50.097	ENSXCOG00000007145	si:ch73-21k16.4	97	51.992	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0015030	Gpatch2	97	51.832	ENSXMAG00000004679	si:ch73-21k16.4	99	52.747	Xiphophorus_maculatus