EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015104 (Gene tree)
Gene ID: 110303877
Gene Symbol: Zc3h12d
Alias: D730019B10Rik|TFL
Full Name: zinc finger CCCH-type containing 12D
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 31711 bases
Position: chr10:4406461-4438171
Accession: 110303877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0022236	RNase_Zc3h12a	PF11977.8	3.1e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0022236	-	4145	-	MGP_CAROLIEiJ_P0022236	533 (aa)	XP_021030760	UPI000A317EDB

Gene Model

Click here to download MGP_CAROLIEiJ_G0015104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0015104	Zc3h12d	62	57.692	MGP_CAROLIEiJ_G0026462	Zc3h12a	56	57.692
MGP_CAROLIEiJ_G0015104	Zc3h12d	56	60.535	MGP_CAROLIEiJ_G0033247	-	81	55.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	64.168	ENSG00000178199	ZC3H12D	98	91.346	Homo_sapiens
MGP_CAROLIEiJ_G0015104	Zc3h12d	50	85.338	ENSAMEG00000018283	-	100	85.338	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015104	Zc3h12d	59	70.159	ENSAPLG00000008379	ZC3H12D	97	70.159	Anas_platyrhynchos
MGP_CAROLIEiJ_G0015104	Zc3h12d	59	64.444	ENSACAG00000006984	ZC3H12D	96	64.444	Anolis_carolinensis
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	64.663	ENSANAG00000020234	ZC3H12D	100	65.863	Aotus_nancymaae
MGP_CAROLIEiJ_G0015104	Zc3h12d	99	60.862	ENSBTAG00000007388	ZC3H12D	99	60.862	Bos_taurus
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	64.781	ENSCJAG00000019606	ZC3H12D	89	78.146	Callithrix_jacchus
MGP_CAROLIEiJ_G0015104	Zc3h12d	50	83.895	ENSCAFG00000000375	ZC3H12D	69	83.895	Canis_familiaris
MGP_CAROLIEiJ_G0015104	Zc3h12d	99	60.503	ENSCHIG00000025964	ZC3H12D	99	60.503	Capra_hircus
MGP_CAROLIEiJ_G0015104	Zc3h12d	92	58.669	ENSCAPG00000014473	ZC3H12D	97	58.669	Cavia_aperea
MGP_CAROLIEiJ_G0015104	Zc3h12d	92	64.919	ENSCPOG00000014608	ZC3H12D	97	64.919	Cavia_porcellus
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	63.388	ENSCCAG00000013595	ZC3H12D	87	76.821	Cebus_capucinus
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	64.234	ENSCATG00000038224	ZC3H12D	89	77.483	Cercocebus_atys
MGP_CAROLIEiJ_G0015104	Zc3h12d	94	65.070	ENSCLAG00000002831	ZC3H12D	97	65.269	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015104	Zc3h12d	99	62.727	ENSCSAG00000017217	ZC3H12D	99	62.909	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	63.139	ENSCANG00000028774	ZC3H12D	89	77.483	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	81.041	ENSCGRG00001019159	Zc3h12d	100	81.041	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	81.041	ENSCGRG00000006178	Zc3h12d	100	81.041	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015104	Zc3h12d	57	82.958	ENSDORG00000027483	-	99	82.958	Dipodomys_ordii
MGP_CAROLIEiJ_G0015104	Zc3h12d	84	65.319	ENSEASG00005008940	ZC3H12D	79	81.897	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	62.143	ENSECAG00000017135	ZC3H12D	98	63.036	Equus_caballus
MGP_CAROLIEiJ_G0015104	Zc3h12d	85	74.172	ENSEEUG00000000087	-	84	74.172	Erinaceus_europaeus
MGP_CAROLIEiJ_G0015104	Zc3h12d	99	63.486	ENSFCAG00000011290	ZC3H12D	94	75.484	Felis_catus
MGP_CAROLIEiJ_G0015104	Zc3h12d	59	70.513	ENSFALG00000013127	ZC3H12D	99	70.513	Ficedula_albicollis
MGP_CAROLIEiJ_G0015104	Zc3h12d	54	85.417	ENSFDAG00000000874	ZC3H12D	74	85.417	Fukomys_damarensis
MGP_CAROLIEiJ_G0015104	Zc3h12d	97	46.477	ENSGALG00000038782	ZC3H12D	94	46.477	Gallus_gallus
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	64.351	ENSGGOG00000005511	ZC3H12D	89	78.146	Gorilla_gorilla
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	72.846	ENSSTOG00000013975	ZC3H12D	100	72.846	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015104	Zc3h12d	56	65.657	ENSLACG00000016816	ZC3H12D	94	65.657	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015104	Zc3h12d	58	81.350	ENSLAFG00000021535	-	97	81.350	Loxodonta_africana
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	64.051	ENSMFAG00000034693	ZC3H12D	89	76.821	Macaca_fascicularis
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	64.234	ENSMNEG00000004043	ZC3H12D	89	76.821	Macaca_nemestrina
MGP_CAROLIEiJ_G0015104	Zc3h12d	56	70.134	ENSMGAG00000012594	ZC3H12D	93	70.134	Meleagris_gallopavo
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	64.964	ENSMICG00000044838	ZC3H12D	100	65.146	Microcebus_murinus
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	80.935	ENSMOCG00000015590	Zc3h12d	100	80.935	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015104	Zc3h12d	56	78.405	ENSMODG00000016829	-	95	78.405	Monodelphis_domestica
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	94.559	ENSMUSG00000039981	Zc3h12d	100	94.559	Mus_musculus
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	91.932	MGP_PahariEiJ_G0023723	Zc3h12d	100	91.932	Mus_pahari
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	95.310	MGP_SPRETEiJ_G0015911	Zc3h12d	100	95.310	Mus_spretus
MGP_CAROLIEiJ_G0015104	Zc3h12d	51	82.117	ENSMPUG00000018072	-	99	82.117	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015104	Zc3h12d	58	82.581	ENSMLUG00000029238	ZC3H12D	99	82.581	Myotis_lucifugus
MGP_CAROLIEiJ_G0015104	Zc3h12d	91	64.549	ENSNGAG00000010502	Zc3h12d	96	64.549	Nannospalax_galili
MGP_CAROLIEiJ_G0015104	Zc3h12d	94	69.801	ENSNLEG00000015313	-	100	69.801	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015104	Zc3h12d	53	77.305	ENSMEUG00000004686	-	99	77.305	Notamacropus_eugenii
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	61.049	ENSOPRG00000014034	ZC3H12D	100	61.798	Ochotona_princeps
MGP_CAROLIEiJ_G0015104	Zc3h12d	89	66.038	ENSODEG00000002553	ZC3H12D	92	66.247	Octodon_degus
MGP_CAROLIEiJ_G0015104	Zc3h12d	50	86.466	ENSOCUG00000007690	-	85	86.466	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0015104	Zc3h12d	99	61.781	ENSOGAG00000031025	ZC3H12D	99	61.781	Otolemur_garnettii
MGP_CAROLIEiJ_G0015104	Zc3h12d	95	58.039	ENSOARG00000002626	ZC3H12D	99	58.039	Ovis_aries
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	64.534	ENSPPAG00000041304	ZC3H12D	89	78.146	Pan_paniscus
MGP_CAROLIEiJ_G0015104	Zc3h12d	99	61.453	ENSPPRG00000004536	ZC3H12D	94	74.839	Panthera_pardus
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	64.534	ENSPTRG00000050357	ZC3H12D	89	78.146	Pan_troglodytes
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	64.234	ENSPANG00000034987	ZC3H12D	89	77.483	Papio_anubis
MGP_CAROLIEiJ_G0015104	Zc3h12d	55	69.231	ENSPSIG00000016475	ZC3H12D	97	69.231	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	80.374	ENSPEMG00000010962	Zc3h12d	100	80.374	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	65.492	ENSPPYG00000017087	ZC3H12D	100	65.492	Pongo_abelii
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	55.288	ENSPCAG00000002991	ZC3H12D	100	55.288	Procavia_capensis
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	64.000	ENSPCOG00000017645	ZC3H12D	100	64.000	Propithecus_coquereli
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	86.116	ENSRNOG00000016041	Zc3h12d	100	86.116	Rattus_norvegicus
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	62.774	ENSRBIG00000012478	ZC3H12D	89	76.821	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	62.774	ENSRROG00000038053	ZC3H12D	89	76.821	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	63.985	ENSSBOG00000023337	ZC3H12D	89	77.483	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015104	Zc3h12d	97	53.480	ENSSHAG00000017000	ZC3H12D	99	53.775	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015104	Zc3h12d	100	60.478	ENSSSCG00000004109	ZC3H12D	98	60.478	Sus_scrofa
MGP_CAROLIEiJ_G0015104	Zc3h12d	59	68.889	ENSTGUG00000010664	ZC3H12D	99	68.889	Taeniopygia_guttata
MGP_CAROLIEiJ_G0015104	Zc3h12d	58	78.896	ENSTBEG00000000892	-	99	78.896	Tupaia_belangeri