EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015302 (Gene tree)
Gene ID: 110302964
Gene Symbol: Ascc3
Alias: ASC1p200|B630009I04Rik|Helic1
Full Name: activating signal cointegrator 1 complex subunit 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 268770 bases
Position: chr10:45642571-45911340
Accession: 110302964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0022843	ResIII	PF04851.15	2.7e-26	1	2
MGP_CAROLIEiJ_P0022843	ResIII	PF04851.15	2.7e-26	2	2
MGP_CAROLIEiJ_P0022843	DEAD	PF00270.29	5.9e-53	1	2
MGP_CAROLIEiJ_P0022843	DEAD	PF00270.29	5.9e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0022843	-	7485	XM_021173819	MGP_CAROLIEiJ_P0022843	2202 (aa)	XP_021029478	UPI000A3199DE

Gene Model

Click here to download MGP_CAROLIEiJ_G0015302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015302's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0015302	Ascc3	81	44.034	MGP_CAROLIEiJ_G0024250	Snrnp200	86	41.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.598	ENSG00000112249	ASCC3	99	92.598	Homo_sapiens
MGP_CAROLIEiJ_G0015302	Ascc3	100	90.509	ENSAMEG00000014749	ASCC3	99	90.509	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015302	Ascc3	98	70.406	ENSACIG00000004551	ascc3	99	70.360	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0015302	Ascc3	100	72.933	ENSAOCG00000005106	ascc3	99	73.299	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0015302	Ascc3	96	73.886	ENSAPEG00000006181	ascc3	99	73.886	Amphiprion_percula
MGP_CAROLIEiJ_G0015302	Ascc3	100	71.937	ENSATEG00000024950	ascc3	99	71.937	Anabas_testudineus
MGP_CAROLIEiJ_G0015302	Ascc3	88	84.194	ENSAPLG00000012589	-	99	84.194	Anas_platyrhynchos
MGP_CAROLIEiJ_G0015302	Ascc3	100	80.362	ENSACAG00000010080	ASCC3	99	80.362	Anolis_carolinensis
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.325	ENSANAG00000021476	ASCC3	99	92.325	Aotus_nancymaae
MGP_CAROLIEiJ_G0015302	Ascc3	86	76.801	ENSACLG00000006736	ascc3	97	76.801	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015302	Ascc3	99	70.487	ENSAMXG00000001395	ascc3	99	70.578	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015302	Ascc3	100	89.918	ENSBTAG00000020482	ASCC3	99	89.918	Bos_taurus
MGP_CAROLIEiJ_G0015302	Ascc3	88	47.184	WBGene00013189	Y54E2A.4	99	45.461	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.098	ENSCJAG00000001507	ASCC3	100	93.409	Callithrix_jacchus
MGP_CAROLIEiJ_G0015302	Ascc3	100	90.418	ENSCAFG00000003554	ASCC3	99	90.418	Canis_familiaris
MGP_CAROLIEiJ_G0015302	Ascc3	100	90.418	ENSCAFG00020016899	ASCC3	99	90.418	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015302	Ascc3	100	90.009	ENSCHIG00000023605	ASCC3	99	90.009	Capra_hircus
MGP_CAROLIEiJ_G0015302	Ascc3	89	93.463	ENSTSYG00000006324	ASCC3	100	93.463	Carlito_syrichta
MGP_CAROLIEiJ_G0015302	Ascc3	92	88.466	ENSCAPG00000010888	ASCC3	99	88.466	Cavia_aperea
MGP_CAROLIEiJ_G0015302	Ascc3	100	91.602	ENSCPOG00000013989	ASCC3	100	91.602	Cavia_porcellus
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.507	ENSCCAG00000024230	ASCC3	99	92.507	Cebus_capucinus
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.916	ENSCATG00000011281	ASCC3	99	92.916	Cercocebus_atys
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.825	ENSCLAG00000009794	ASCC3	99	92.825	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.870	ENSCSAG00000014674	ASCC3	99	92.870	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015302	Ascc3	93	84.551	ENSCHOG00000002063	ASCC3	85	84.551	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0015302	Ascc3	100	82.212	ENSCPBG00000003881	ASCC3	99	82.167	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015302	Ascc3	82	59.802	ENSCSAVG00000007670	-	100	68.545	Ciona_savignyi
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.825	ENSCANG00000004215	ASCC3	99	92.825	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015302	Ascc3	100	94.687	ENSCGRG00001000918	Ascc3	100	94.687	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015302	Ascc3	100	94.823	ENSCGRG00000012933	Ascc3	100	94.823	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015302	Ascc3	99	72.265	ENSCSEG00000012811	ascc3	99	71.984	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0015302	Ascc3	100	70.636	ENSCVAG00000013014	ascc3	99	70.681	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015302	Ascc3	92	72.348	ENSDARG00000086678	ascc3	100	85.859	Danio_rerio
MGP_CAROLIEiJ_G0015302	Ascc3	80	95.407	ENSDNOG00000010279	ASCC3	99	95.407	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015302	Ascc3	100	93.006	ENSDORG00000008572	Ascc3	99	93.006	Dipodomys_ordii
MGP_CAROLIEiJ_G0015302	Ascc3	90	53.550	FBgn0038344	obe	91	53.550	Drosophila_melanogaster
MGP_CAROLIEiJ_G0015302	Ascc3	82	98.046	ENSETEG00000010694	-	72	98.046	Echinops_telfairi
MGP_CAROLIEiJ_G0015302	Ascc3	54	79.079	ENSEBUG00000007355	-	99	79.079	Eptatretus_burgeri
MGP_CAROLIEiJ_G0015302	Ascc3	100	90.327	ENSEASG00005006324	ASCC3	99	90.327	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015302	Ascc3	100	90.372	ENSECAG00000012013	ASCC3	99	90.372	Equus_caballus
MGP_CAROLIEiJ_G0015302	Ascc3	87	81.747	ENSEEUG00000009748	ASCC3	99	81.747	Erinaceus_europaeus
MGP_CAROLIEiJ_G0015302	Ascc3	99	76.826	ENSELUG00000023441	ascc3	99	76.826	Esox_lucius
MGP_CAROLIEiJ_G0015302	Ascc3	100	91.008	ENSFCAG00000031266	ASCC3	99	91.008	Felis_catus
MGP_CAROLIEiJ_G0015302	Ascc3	99	81.793	ENSFALG00000005260	ASCC3	99	81.793	Ficedula_albicollis
MGP_CAROLIEiJ_G0015302	Ascc3	100	91.826	ENSFDAG00000011358	ASCC3	99	91.826	Fukomys_damarensis
MGP_CAROLIEiJ_G0015302	Ascc3	99	72.079	ENSFHEG00000019247	ascc3	99	78.881	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0015302	Ascc3	98	70.377	ENSGMOG00000018158	ascc3	99	70.239	Gadus_morhua
MGP_CAROLIEiJ_G0015302	Ascc3	100	81.456	ENSGALG00000015465	ASCC3	99	81.456	Gallus_gallus
MGP_CAROLIEiJ_G0015302	Ascc3	99	71.701	ENSGACG00000014141	ascc3	99	71.746	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0015302	Ascc3	89	84.657	ENSGAGG00000020794	ASCC3	99	84.657	Gopherus_agassizii
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.552	ENSGGOG00000002790	ASCC3	99	92.552	Gorilla_gorilla
MGP_CAROLIEiJ_G0015302	Ascc3	89	72.821	ENSHBUG00000015110	ascc3	98	72.885	Haplochromis_burtoni
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.280	ENSHGLG00000002093	ASCC3	99	92.280	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015302	Ascc3	100	90.177	ENSHGLG00100005896	ASCC3	100	90.177	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015302	Ascc3	99	71.915	ENSHCOG00000021142	ascc3	100	71.915	Hippocampus_comes
MGP_CAROLIEiJ_G0015302	Ascc3	99	72.953	ENSIPUG00000013863	ascc3	99	72.999	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015302	Ascc3	100	90.917	ENSSTOG00000006645	ASCC3	100	90.917	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015302	Ascc3	100	91.553	ENSJJAG00000022570	Ascc3	99	91.553	Jaculus_jaculus
MGP_CAROLIEiJ_G0015302	Ascc3	100	72.514	ENSKMAG00000003953	ascc3	99	72.559	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0015302	Ascc3	85	76.993	ENSLBEG00000009623	ascc3	99	77.100	Labrus_bergylta
MGP_CAROLIEiJ_G0015302	Ascc3	75	81.553	ENSLACG00000015253	ascc3	100	81.553	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015302	Ascc3	100	76.770	ENSLOCG00000016550	ascc3	99	76.770	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0015302	Ascc3	89	78.579	ENSLAFG00000011363	ASCC3	100	78.579	Loxodonta_africana
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.734	ENSMFAG00000002081	ASCC3	99	92.734	Macaca_fascicularis
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.779	ENSMMUG00000022287	ASCC3	99	92.779	Macaca_mulatta
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.688	ENSMNEG00000032760	ASCC3	99	92.688	Macaca_nemestrina
MGP_CAROLIEiJ_G0015302	Ascc3	100	91.625	ENSMLEG00000035241	ASCC3	99	91.625	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015302	Ascc3	100	72.604	ENSMAMG00000005917	ascc3	99	72.604	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015302	Ascc3	75	80.712	ENSMZEG00005002710	ascc3	73	80.777	Maylandia_zebra
MGP_CAROLIEiJ_G0015302	Ascc3	100	80.389	ENSMGAG00000013551	ASCC3	99	80.389	Meleagris_gallopavo
MGP_CAROLIEiJ_G0015302	Ascc3	100	94.823	ENSMAUG00000018304	Ascc3	100	94.823	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015302	Ascc3	100	93.279	ENSMICG00000008861	ASCC3	99	93.279	Microcebus_murinus
MGP_CAROLIEiJ_G0015302	Ascc3	100	95.005	ENSMOCG00000004549	Ascc3	99	95.005	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015302	Ascc3	96	69.362	ENSMMOG00000003198	ascc3	99	69.343	Mola_mola
MGP_CAROLIEiJ_G0015302	Ascc3	100	85.009	ENSMODG00000018082	ASCC3	99	85.009	Monodelphis_domestica
MGP_CAROLIEiJ_G0015302	Ascc3	96	70.174	ENSMALG00000015536	ascc3	99	70.174	Monopterus_albus
MGP_CAROLIEiJ_G0015302	Ascc3	100	98.955	ENSMUSG00000038774	Ascc3	100	98.955	Mus_musculus
MGP_CAROLIEiJ_G0015302	Ascc3	100	99.092	MGP_SPRETEiJ_G0016111	Ascc3	100	99.092	Mus_spretus
MGP_CAROLIEiJ_G0015302	Ascc3	100	90.599	ENSMPUG00000001675	ASCC3	99	90.599	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015302	Ascc3	100	89.964	ENSMLUG00000002886	ASCC3	99	89.964	Myotis_lucifugus
MGP_CAROLIEiJ_G0015302	Ascc3	100	93.642	ENSNGAG00000000702	Ascc3	99	93.642	Nannospalax_galili
MGP_CAROLIEiJ_G0015302	Ascc3	84	66.480	ENSNBRG00000022083	ascc3	92	66.480	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.552	ENSNLEG00000013890	ASCC3	99	92.552	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015302	Ascc3	99	96.491	ENSMEUG00000003061	ASCC3	85	96.491	Notamacropus_eugenii
MGP_CAROLIEiJ_G0015302	Ascc3	88	98.667	ENSOPRG00000010249	-	79	98.667	Ochotona_princeps
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.371	ENSODEG00000000069	ASCC3	99	92.371	Octodon_degus
MGP_CAROLIEiJ_G0015302	Ascc3	100	71.790	ENSONIG00000016540	ascc3	99	71.835	Oreochromis_niloticus
MGP_CAROLIEiJ_G0015302	Ascc3	99	83.454	ENSOANG00000008944	ASCC3	99	83.454	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0015302	Ascc3	99	92.588	ENSOCUG00000002766	ASCC3	100	92.588	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0015302	Ascc3	94	73.003	ENSORLG00000004221	ascc3	99	73.051	Oryzias_latipes
MGP_CAROLIEiJ_G0015302	Ascc3	86	77.566	ENSORLG00020022595	ascc3	97	77.566	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0015302	Ascc3	94	73.003	ENSORLG00015009231	ascc3	99	73.051	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015302	Ascc3	99	71.312	ENSOMEG00000019630	ascc3	100	71.312	Oryzias_melastigma
MGP_CAROLIEiJ_G0015302	Ascc3	89	91.312	ENSOGAG00000009875	ASCC3	100	91.312	Otolemur_garnettii
MGP_CAROLIEiJ_G0015302	Ascc3	100	90.100	ENSOARG00000011627	ASCC3	99	90.100	Ovis_aries
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.643	ENSPPAG00000030772	ASCC3	99	92.643	Pan_paniscus
MGP_CAROLIEiJ_G0015302	Ascc3	100	91.008	ENSPPRG00000011358	ASCC3	99	91.008	Panthera_pardus
MGP_CAROLIEiJ_G0015302	Ascc3	100	90.736	ENSPTIG00000006331	ASCC3	99	90.736	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.598	ENSPTRG00000018448	ASCC3	99	92.598	Pan_troglodytes
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.825	ENSPANG00000006307	ASCC3	99	92.825	Papio_anubis
MGP_CAROLIEiJ_G0015302	Ascc3	100	73.387	ENSPKIG00000013639	ascc3	100	73.445	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015302	Ascc3	78	84.898	ENSPSIG00000002620	-	96	84.898	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015302	Ascc3	100	95.686	ENSPEMG00000015319	Ascc3	100	95.686	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0015302	Ascc3	68	78.753	ENSPMAG00000002163	-	100	78.753	Petromyzon_marinus
MGP_CAROLIEiJ_G0015302	Ascc3	100	85.417	ENSPCIG00000017288	ASCC3	99	85.701	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015302	Ascc3	88	74.781	ENSPFOG00000001462	ascc3	98	74.832	Poecilia_formosa
MGP_CAROLIEiJ_G0015302	Ascc3	99	72.587	ENSPREG00000017616	ascc3	99	72.633	Poecilia_reticulata
MGP_CAROLIEiJ_G0015302	Ascc3	100	91.281	ENSPPYG00000016869	ASCC3	99	91.281	Pongo_abelii
MGP_CAROLIEiJ_G0015302	Ascc3	100	79.201	ENSPCAG00000008834	ASCC3	99	79.201	Procavia_capensis
MGP_CAROLIEiJ_G0015302	Ascc3	100	83.243	ENSPVAG00000012827	ASCC3	99	83.243	Pteropus_vampyrus
MGP_CAROLIEiJ_G0015302	Ascc3	86	76.748	ENSPNYG00000018913	ascc3	97	76.748	Pundamilia_nyererei
MGP_CAROLIEiJ_G0015302	Ascc3	86	78.655	ENSPNAG00000016413	ascc3	97	78.655	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0015302	Ascc3	99	96.956	ENSRNOG00000037604	Ascc3	100	96.956	Rattus_norvegicus
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.825	ENSRROG00000045402	ASCC3	99	92.825	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015302	Ascc3	82	44.826	YGR271W	-	90	44.826	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0015302	Ascc3	100	92.507	ENSSBOG00000025142	ASCC3	99	92.507	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015302	Ascc3	100	84.912	ENSSHAG00000016496	ASCC3	99	84.912	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015302	Ascc3	99	73.318	ENSSFOG00015010273	ascc3	99	73.556	Scleropages_formosus
MGP_CAROLIEiJ_G0015302	Ascc3	100	71.906	ENSSMAG00000012927	ascc3	99	71.951	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015302	Ascc3	99	72.373	ENSSDUG00000010897	ascc3	99	72.373	Seriola_dumerili
MGP_CAROLIEiJ_G0015302	Ascc3	99	72.315	ENSSLDG00000021782	ascc3	99	72.315	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015302	Ascc3	100	86.119	ENSSARG00000001858	ASCC3	92	86.119	Sorex_araneus
MGP_CAROLIEiJ_G0015302	Ascc3	100	81.863	ENSSPUG00000001842	ASCC3	99	81.863	Sphenodon_punctatus
MGP_CAROLIEiJ_G0015302	Ascc3	99	72.637	ENSSPAG00000007677	ascc3	99	72.637	Stegastes_partitus
MGP_CAROLIEiJ_G0015302	Ascc3	100	90.236	ENSSSCG00000004358	ASCC3	99	91.118	Sus_scrofa
MGP_CAROLIEiJ_G0015302	Ascc3	90	83.804	ENSTGUG00000012262	ASCC3	99	83.804	Taeniopygia_guttata
MGP_CAROLIEiJ_G0015302	Ascc3	98	66.927	ENSTNIG00000005079	ascc3	100	66.989	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0015302	Ascc3	91	97.015	ENSTBEG00000015236	ASCC3	86	97.015	Tupaia_belangeri
MGP_CAROLIEiJ_G0015302	Ascc3	100	90.071	ENSTTRG00000008255	ASCC3	96	90.071	Tursiops_truncatus
MGP_CAROLIEiJ_G0015302	Ascc3	68	95.709	ENSUAMG00000023340	-	99	94.434	Ursus_americanus
MGP_CAROLIEiJ_G0015302	Ascc3	100	89.600	ENSUMAG00000021200	ASCC3	99	89.600	Ursus_maritimus
MGP_CAROLIEiJ_G0015302	Ascc3	100	86.110	ENSVPAG00000001408	ASCC3	99	86.110	Vicugna_pacos
MGP_CAROLIEiJ_G0015302	Ascc3	100	90.690	ENSVVUG00000015397	ASCC3	99	91.811	Vulpes_vulpes
MGP_CAROLIEiJ_G0015302	Ascc3	79	80.335	ENSXETG00000032212	-	99	80.335	Xenopus_tropicalis
MGP_CAROLIEiJ_G0015302	Ascc3	99	72.127	ENSXMAG00000000071	ascc3	100	72.172	Xiphophorus_maculatus