EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015342 (Gene tree)
Gene ID: 110302908
Gene Symbol: P4ha1
Alias: P4ha
Full Name: prolyl 4-hydroxylase subunit alpha 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 52557 bases
Position: chr10:53817349-53869905
Accession: 110302908
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0022947	2OG-FeII_Oxy	PF03171.20	3.1e-08	1	1
MGP_CAROLIEiJ_P0022948	2OG-FeII_Oxy	PF03171.20	4.1e-08	1	1
MGP_CAROLIEiJ_P0022946	2OG-FeII_Oxy	PF03171.20	4.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0022948	-	2900	-	MGP_CAROLIEiJ_P0022948	534 (aa)	-	UPI000A316F18
MGP_CAROLIEiJ_T0022947	-	2369	-	MGP_CAROLIEiJ_P0022947	454 (aa)	XP_021029374	UPI000A318A4E
MGP_CAROLIEiJ_T0022946	-	3994	XM_021173713	MGP_CAROLIEiJ_P0022946	534 (aa)	XP_021029372	UPI000A315637

Gene Model

Click here to download MGP_CAROLIEiJ_G0015342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015342's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0015342	P4ha1	99	62.477	MGP_CAROLIEiJ_G0016353	P4ha2	99	62.477

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015342	P4ha1	100	95.318	ENSG00000122884	P4HA1	100	95.318	Homo_sapiens
MGP_CAROLIEiJ_G0015342	P4ha1	96	77.622	ENSAPOG00000005170	p4ha1b	99	74.081	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0015342	P4ha1	100	94.569	ENSAMEG00000017009	P4HA1	100	94.569	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015342	P4ha1	96	78.261	ENSACIG00000007255	p4ha1b	99	73.996	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0015342	P4ha1	96	78.322	ENSAOCG00000001647	p4ha1b	98	74.539	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0015342	P4ha1	96	78.322	ENSAPEG00000005243	p4ha1b	98	74.539	Amphiprion_percula
MGP_CAROLIEiJ_G0015342	P4ha1	95	72.388	ENSAPEG00000010402	-	96	64.912	Amphiprion_percula
MGP_CAROLIEiJ_G0015342	P4ha1	96	79.720	ENSATEG00000009272	p4ha1b	98	75.696	Anabas_testudineus
MGP_CAROLIEiJ_G0015342	P4ha1	97	86.180	ENSAPLG00000009284	P4HA1	100	86.180	Anas_platyrhynchos
MGP_CAROLIEiJ_G0015342	P4ha1	100	84.201	ENSACAG00000000564	P4HA1	99	84.201	Anolis_carolinensis
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.256	ENSANAG00000024545	P4HA1	100	97.333	Aotus_nancymaae
MGP_CAROLIEiJ_G0015342	P4ha1	96	79.710	ENSACLG00000021556	p4ha1b	99	72.727	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015342	P4ha1	100	75.490	ENSAMXG00000011123	p4ha1b	100	73.148	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.000	ENSBTAG00000032996	P4HA1	100	94.569	Bos_taurus
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.035	ENSCJAG00000007429	P4HA1	100	96.035	Callithrix_jacchus
MGP_CAROLIEiJ_G0015342	P4ha1	100	97.000	ENSCAFG00000014573	P4HA1	100	94.569	Canis_familiaris
MGP_CAROLIEiJ_G0015342	P4ha1	99	97.000	ENSCAFG00020023993	P4HA1	100	92.830	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.333	ENSCHIG00000013957	P4HA1	100	94.195	Capra_hircus
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.000	ENSTSYG00000004004	P4HA1	100	95.492	Carlito_syrichta
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.333	ENSCPOG00000015701	P4HA1	100	95.374	Cavia_porcellus
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.035	ENSCATG00000029618	P4HA1	100	97.000	Cercocebus_atys
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.667	ENSCLAG00000017260	P4HA1	100	96.667	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015342	P4ha1	100	95.131	ENSCSAG00000008626	P4HA1	100	95.131	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015342	P4ha1	99	87.086	ENSCPBG00000007933	P4HA1	99	85.794	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.035	ENSCANG00000033147	P4HA1	100	97.000	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015342	P4ha1	100	97.000	ENSCGRG00001007006	P4ha1	100	95.815	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015342	P4ha1	100	97.000	ENSCGRG00000009371	P4ha1	100	95.815	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015342	P4ha1	100	73.856	ENSCSEG00000004939	p4ha1b	99	73.856	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0015342	P4ha1	100	72.222	ENSCVAG00000016433	p4ha1b	100	71.846	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015342	P4ha1	97	75.479	ENSDARG00000071082	p4ha1b	100	76.316	Danio_rerio
MGP_CAROLIEiJ_G0015342	P4ha1	84	54.878	ENSDARG00000017038	zgc:152670	95	54.701	Danio_rerio
MGP_CAROLIEiJ_G0015342	P4ha1	99	93.960	ENSDNOG00000013665	P4HA1	94	92.105	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015342	P4ha1	100	97.000	ENSDORG00000003405	P4ha1	100	95.154	Dipodomys_ordii
MGP_CAROLIEiJ_G0015342	P4ha1	98	62.617	ENSEBUG00000005379	p4ha1b	98	60.795	Eptatretus_burgeri
MGP_CAROLIEiJ_G0015342	P4ha1	100	95.815	ENSEASG00005016606	P4HA1	100	97.000	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015342	P4ha1	99	93.311	ENSECAG00000012496	P4HA1	99	95.669	Equus_caballus
MGP_CAROLIEiJ_G0015342	P4ha1	99	89.610	ENSEEUG00000005542	P4HA1	85	89.610	Erinaceus_europaeus
MGP_CAROLIEiJ_G0015342	P4ha1	99	72.037	ENSELUG00000005913	p4ha1b	99	73.450	Esox_lucius
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.333	ENSFCAG00000018673	P4HA1	100	94.569	Felis_catus
MGP_CAROLIEiJ_G0015342	P4ha1	99	87.748	ENSFALG00000012773	P4HA1	99	85.047	Ficedula_albicollis
MGP_CAROLIEiJ_G0015342	P4ha1	100	95.333	ENSFDAG00000007094	P4HA1	100	85.847	Fukomys_damarensis
MGP_CAROLIEiJ_G0015342	P4ha1	96	76.224	ENSFHEG00000022856	p4ha1b	98	74.128	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0015342	P4ha1	94	71.711	ENSGMOG00000018948	p4ha1b	99	70.349	Gadus_morhua
MGP_CAROLIEiJ_G0015342	P4ha1	99	88.411	ENSGALG00000004325	P4HA1	100	85.234	Gallus_gallus
MGP_CAROLIEiJ_G0015342	P4ha1	97	75.429	ENSGAFG00000019818	p4ha1b	98	74.492	Gambusia_affinis
MGP_CAROLIEiJ_G0015342	P4ha1	97	73.055	ENSGACG00000010233	p4ha1b	99	72.037	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.035	ENSGGOG00000015551	P4HA1	100	97.000	Gorilla_gorilla
MGP_CAROLIEiJ_G0015342	P4ha1	96	79.710	ENSHBUG00000015524	p4ha1b	98	73.148	Haplochromis_burtoni
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.667	ENSHGLG00000011764	P4HA1	100	96.667	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015342	P4ha1	94	75.000	ENSHCOG00000017152	p4ha1b	99	74.319	Hippocampus_comes
MGP_CAROLIEiJ_G0015342	P4ha1	97	75.483	ENSIPUG00000015157	P4HA1	100	74.157	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.667	ENSSTOG00000027062	P4HA1	100	95.815	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015342	P4ha1	100	95.374	ENSJJAG00000004232	P4ha1	100	95.374	Jaculus_jaculus
MGP_CAROLIEiJ_G0015342	P4ha1	96	76.224	ENSKMAG00000001588	p4ha1b	99	73.897	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0015342	P4ha1	97	74.187	ENSLBEG00000018911	p4ha1b	98	73.098	Labrus_bergylta
MGP_CAROLIEiJ_G0015342	P4ha1	98	81.992	ENSLACG00000010202	P4HA1	99	80.524	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015342	P4ha1	99	78.431	ENSLOCG00000008546	p4ha1b	98	77.715	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0015342	P4ha1	100	92.509	ENSLAFG00000002652	P4HA1	100	92.509	Loxodonta_africana
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.035	ENSMFAG00000030507	P4HA1	100	97.000	Macaca_fascicularis
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.035	ENSMMUG00000011274	P4HA1	100	97.000	Macaca_mulatta
MGP_CAROLIEiJ_G0015342	P4ha1	99	92.871	ENSMNEG00000011433	P4HA1	98	94.912	Macaca_nemestrina
MGP_CAROLIEiJ_G0015342	P4ha1	96	89.824	ENSMLEG00000043338	P4HA1	100	98.361	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015342	P4ha1	96	77.622	ENSMAMG00000015854	p4ha1b	99	74.026	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015342	P4ha1	96	79.710	ENSMZEG00005027421	p4ha1b	98	72.963	Maylandia_zebra
MGP_CAROLIEiJ_G0015342	P4ha1	99	85.102	ENSMGAG00000005554	P4HA1	100	86.705	Meleagris_gallopavo
MGP_CAROLIEiJ_G0015342	P4ha1	100	78.505	ENSMAUG00000011056	P4ha1	97	89.333	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.035	ENSMICG00000031365	P4HA1	100	97.000	Microcebus_murinus
MGP_CAROLIEiJ_G0015342	P4ha1	100	97.667	ENSMOCG00000017531	P4ha1	100	96.916	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015342	P4ha1	96	77.622	ENSMMOG00000008022	p4ha1b	99	74.026	Mola_mola
MGP_CAROLIEiJ_G0015342	P4ha1	100	91.419	ENSMODG00000000121	P4HA1	99	88.641	Monodelphis_domestica
MGP_CAROLIEiJ_G0015342	P4ha1	96	76.224	ENSMALG00000019674	p4ha1b	98	73.704	Monopterus_albus
MGP_CAROLIEiJ_G0015342	P4ha1	100	99.559	ENSMUSG00000019916	P4ha1	100	99.559	Mus_musculus
MGP_CAROLIEiJ_G0015342	P4ha1	100	99.119	MGP_PahariEiJ_G0030758	P4ha1	100	99.119	Mus_pahari
MGP_CAROLIEiJ_G0015342	P4ha1	100	99.559	MGP_SPRETEiJ_G0016153	P4ha1	100	99.559	Mus_spretus
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.667	ENSMPUG00000003940	P4HA1	100	94.757	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015342	P4ha1	100	94.195	ENSMLUG00000006548	P4HA1	100	94.195	Myotis_lucifugus
MGP_CAROLIEiJ_G0015342	P4ha1	100	98.333	ENSNGAG00000014487	P4ha1	100	98.333	Nannospalax_galili
MGP_CAROLIEiJ_G0015342	P4ha1	96	79.710	ENSNBRG00000014791	p4ha1b	99	74.248	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0015342	P4ha1	100	89.485	ENSNLEG00000035416	P4HA1	99	95.436	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015342	P4ha1	89	90.714	ENSMEUG00000010326	P4HA1	95	80.943	Notamacropus_eugenii
MGP_CAROLIEiJ_G0015342	P4ha1	100	89.000	ENSOPRG00000000990	P4HA1	100	83.521	Ochotona_princeps
MGP_CAROLIEiJ_G0015342	P4ha1	100	95.154	ENSODEG00000015164	P4HA1	100	95.154	Octodon_degus
MGP_CAROLIEiJ_G0015342	P4ha1	96	79.710	ENSONIG00000000737	p4ha1b	88	73.162	Oreochromis_niloticus
MGP_CAROLIEiJ_G0015342	P4ha1	80	91.608	ENSOANG00000001125	-	100	91.608	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0015342	P4ha1	100	93.820	ENSOCUG00000009739	P4HA1	100	93.820	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0015342	P4ha1	96	76.923	ENSORLG00000005147	p4ha1b	100	75.194	Oryzias_latipes
MGP_CAROLIEiJ_G0015342	P4ha1	96	76.923	ENSORLG00020010911	p4ha1b	98	73.801	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0015342	P4ha1	87	79.167	ENSORLG00015016175	p4ha1b	98	74.741	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015342	P4ha1	96	77.622	ENSOMEG00000009962	p4ha1b	99	74.492	Oryzias_melastigma
MGP_CAROLIEiJ_G0015342	P4ha1	100	93.657	ENSOGAG00000003483	P4HA1	100	93.657	Otolemur_garnettii
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.333	ENSOARG00000007348	P4HA1	100	94.195	Ovis_aries
MGP_CAROLIEiJ_G0015342	P4ha1	100	88.170	ENSPPAG00000030135	P4HA1	100	98.361	Pan_paniscus
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.333	ENSPPRG00000002655	P4HA1	100	94.569	Panthera_pardus
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.333	ENSPTIG00000007711	P4HA1	100	94.569	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0015342	P4ha1	100	93.833	ENSPTRG00000002619	P4HA1	100	93.833	Pan_troglodytes
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.035	ENSPANG00000022355	P4HA1	100	97.000	Papio_anubis
MGP_CAROLIEiJ_G0015342	P4ha1	99	76.030	ENSPKIG00000000438	p4ha1b	99	76.030	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015342	P4ha1	99	87.748	ENSPSIG00000016298	P4HA1	100	86.142	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015342	P4ha1	95	80.597	ENSPMGG00000007593	p4ha1b	99	74.248	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.035	ENSPEMG00000006561	P4ha1	100	96.035	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0015342	P4ha1	100	91.419	ENSPCIG00000018768	P4HA1	100	89.199	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015342	P4ha1	96	76.923	ENSPFOG00000018574	p4ha1b	98	73.937	Poecilia_formosa
MGP_CAROLIEiJ_G0015342	P4ha1	96	76.923	ENSPLAG00000012628	p4ha1b	99	75.054	Poecilia_latipinna
MGP_CAROLIEiJ_G0015342	P4ha1	96	76.224	ENSPMEG00000024082	p4ha1b	98	73.752	Poecilia_mexicana
MGP_CAROLIEiJ_G0015342	P4ha1	96	76.923	ENSPREG00000010003	p4ha1b	98	74.677	Poecilia_reticulata
MGP_CAROLIEiJ_G0015342	P4ha1	100	95.318	ENSPPYG00000002348	P4HA1	100	95.318	Pongo_abelii
MGP_CAROLIEiJ_G0015342	P4ha1	95	85.236	ENSPCOG00000017553	P4HA1	100	97.951	Propithecus_coquereli
MGP_CAROLIEiJ_G0015342	P4ha1	99	85.333	ENSPVAG00000012989	P4HA1	99	84.528	Pteropus_vampyrus
MGP_CAROLIEiJ_G0015342	P4ha1	96	79.710	ENSPNYG00000002443	p4ha1b	98	73.063	Pundamilia_nyererei
MGP_CAROLIEiJ_G0015342	P4ha1	100	73.112	ENSPNAG00000023149	p4ha1b	99	73.567	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0015342	P4ha1	100	99.667	ENSRNOG00000050655	P4ha1	100	98.127	Rattus_norvegicus
MGP_CAROLIEiJ_G0015342	P4ha1	100	91.824	ENSRBIG00000035304	P4HA1	100	82.772	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.035	ENSRROG00000044078	P4HA1	100	97.000	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015342	P4ha1	71	88.860	ENSSHAG00000008056	P4HA1	100	87.565	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015342	P4ha1	94	81.102	ENSSFOG00015009176	p4ha1b	100	75.882	Scleropages_formosus
MGP_CAROLIEiJ_G0015342	P4ha1	100	73.616	ENSSMAG00000019199	p4ha1b	99	73.198	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015342	P4ha1	96	76.923	ENSSDUG00000016587	p4ha1b	98	73.937	Seriola_dumerili
MGP_CAROLIEiJ_G0015342	P4ha1	96	76.224	ENSSLDG00000016261	p4ha1b	98	73.937	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015342	P4ha1	100	90.075	ENSSARG00000003275	P4HA1	100	90.075	Sorex_araneus
MGP_CAROLIEiJ_G0015342	P4ha1	99	85.393	ENSSPUG00000002624	P4HA1	99	85.393	Sphenodon_punctatus
MGP_CAROLIEiJ_G0015342	P4ha1	83	82.895	ENSSPAG00000011193	p4ha1b	100	73.561	Stegastes_partitus
MGP_CAROLIEiJ_G0015342	P4ha1	100	95.667	ENSSSCG00000010292	P4HA1	100	94.195	Sus_scrofa
MGP_CAROLIEiJ_G0015342	P4ha1	99	87.086	ENSTGUG00000004364	-	99	84.673	Taeniopygia_guttata
MGP_CAROLIEiJ_G0015342	P4ha1	99	73.077	ENSTRUG00000004081	p4ha1b	99	73.578	Takifugu_rubripes
MGP_CAROLIEiJ_G0015342	P4ha1	99	74.000	ENSTNIG00000017021	p4ha1b	99	73.271	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0015342	P4ha1	100	92.884	ENSTTRG00000009782	P4HA1	100	92.697	Tursiops_truncatus
MGP_CAROLIEiJ_G0015342	P4ha1	54	98.361	ENSUAMG00000011694	-	100	98.361	Ursus_americanus
MGP_CAROLIEiJ_G0015342	P4ha1	100	94.944	ENSUMAG00000009024	P4HA1	100	94.944	Ursus_maritimus
MGP_CAROLIEiJ_G0015342	P4ha1	100	96.333	ENSVPAG00000007253	P4HA1	100	84.831	Vicugna_pacos
MGP_CAROLIEiJ_G0015342	P4ha1	100	97.000	ENSVVUG00000022660	P4HA1	100	94.569	Vulpes_vulpes
MGP_CAROLIEiJ_G0015342	P4ha1	99	80.795	ENSXETG00000006154	p4ha1	99	77.196	Xenopus_tropicalis
MGP_CAROLIEiJ_G0015342	P4ha1	96	78.261	ENSXCOG00000010262	p4ha1b	99	73.752	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0015342	P4ha1	96	76.224	ENSXMAG00000003889	p4ha1b	98	74.026	Xiphophorus_maculatus