EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015372 (Gene tree)
Gene ID: 110303624
Gene Symbol: Sar1a
Alias: 1600019H17Rik|Sara1
Full Name: secretion associated Ras related GTPase 1A
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 13347 bases
Position: chr10:56185829-56199175
Accession: 110303624
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0023062	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0023062	-	2608	XM_021174778	MGP_CAROLIEiJ_P0023062	198 (aa)	XP_021030437	UPI000002180D

Gene Model

Click here to download MGP_CAROLIEiJ_G0015372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015372's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0015372	Sar1a	59	38.843	MGP_CAROLIEiJ_G0017227	Arl4d	60	38.843
MGP_CAROLIEiJ_G0015372	Sar1a	72	31.469	MGP_CAROLIEiJ_G0022597	Arl2	78	31.469
MGP_CAROLIEiJ_G0015372	Sar1a	64	33.333	MGP_CAROLIEiJ_G0014402	Arl4c	69	33.333
MGP_CAROLIEiJ_G0015372	Sar1a	55	31.818	MGP_CAROLIEiJ_G0018537	Arl10	53	31.818
MGP_CAROLIEiJ_G0015372	Sar1a	89	31.844	MGP_CAROLIEiJ_G0025066	Arl14	88	31.844
MGP_CAROLIEiJ_G0015372	Sar1a	87	33.526	MGP_CAROLIEiJ_G0019382	Arl11	91	33.526
MGP_CAROLIEiJ_G0015372	Sar1a	100	90.909	MGP_CAROLIEiJ_G0016318	Sar1b	100	90.909
MGP_CAROLIEiJ_G0015372	Sar1a	67	30.075	MGP_CAROLIEiJ_G0028705	Arl8b	72	30.075
MGP_CAROLIEiJ_G0015372	Sar1a	73	34.868	MGP_CAROLIEiJ_G0017715	Arl4a	76	34.868

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSG00000079332	SAR1A	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSAMEG00000017868	SAR1A	100	99.495	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015372	Sar1a	100	100.000	ENSANAG00000030371	SAR1A	100	100.000	Aotus_nancymaae
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSBTAG00000016858	SAR1A	100	99.495	Bos_taurus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSCJAG00000042744	-	100	99.495	Callithrix_jacchus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSCAFG00020025897	SAR1A	100	99.495	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSCHIG00000018882	SAR1A	100	99.495	Capra_hircus
MGP_CAROLIEiJ_G0015372	Sar1a	100	100.000	ENSTSYG00000005955	-	100	100.000	Carlito_syrichta
MGP_CAROLIEiJ_G0015372	Sar1a	99	86.735	ENSTSYG00000033030	-	100	86.735	Carlito_syrichta
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSCPOG00000032583	SAR1A	100	99.495	Cavia_porcellus
MGP_CAROLIEiJ_G0015372	Sar1a	100	97.980	ENSCCAG00000019722	SAR1A	100	97.980	Cebus_capucinus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSCATG00000039017	SAR1A	100	99.495	Cercocebus_atys
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSCLAG00000012839	SAR1A	100	99.495	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSCSAG00000008263	SAR1A	100	99.495	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSCHOG00000000472	-	100	99.495	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0015372	Sar1a	100	97.475	ENSCPBG00000025882	SAR1A	100	97.475	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSCANG00000038841	SAR1A	100	99.495	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSCGRG00001016695	Sar1a	100	99.495	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSCGRG00000014890	Sar1a	100	99.495	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015372	Sar1a	100	100.000	ENSDNOG00000035765	-	100	100.000	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSDORG00000023465	-	100	99.495	Dipodomys_ordii
MGP_CAROLIEiJ_G0015372	Sar1a	86	87.647	ENSDORG00000029471	-	94	87.647	Dipodomys_ordii
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSEASG00005016046	SAR1A	100	99.495	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSECAG00000009730	SAR1A	100	99.495	Equus_caballus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSFCAG00000043085	SAR1A	100	99.495	Felis_catus
MGP_CAROLIEiJ_G0015372	Sar1a	100	97.475	ENSFALG00000012661	SAR1A	100	97.475	Ficedula_albicollis
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSFDAG00000010673	SAR1A	100	99.495	Fukomys_damarensis
MGP_CAROLIEiJ_G0015372	Sar1a	100	97.980	ENSGALG00000004431	SAR1A	100	97.980	Gallus_gallus
MGP_CAROLIEiJ_G0015372	Sar1a	100	96.970	ENSGAGG00000013705	SAR1A	100	96.970	Gopherus_agassizii
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSGGOG00000024879	SAR1A	100	99.495	Gorilla_gorilla
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSHGLG00000016765	SAR1A	100	99.495	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSHGLG00100017379	SAR1A	100	99.495	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015372	Sar1a	100	100.000	ENSSTOG00000012780	SAR1A	100	100.000	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015372	Sar1a	100	98.485	ENSJJAG00000016603	-	100	98.485	Jaculus_jaculus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSLAFG00000004046	SAR1A	100	99.495	Loxodonta_africana
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSMFAG00000039894	SAR1A	100	99.495	Macaca_fascicularis
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSMMUG00000006398	SAR1A	100	99.495	Macaca_mulatta
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSMNEG00000030362	SAR1A	100	99.495	Macaca_nemestrina
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSMLEG00000037528	SAR1A	100	99.495	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSMAUG00000005624	Sar1a	100	99.495	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015372	Sar1a	99	81.633	ENSMICG00000035294	-	95	82.902	Microcebus_murinus
MGP_CAROLIEiJ_G0015372	Sar1a	100	100.000	ENSMICG00000001638	-	100	100.000	Microcebus_murinus
MGP_CAROLIEiJ_G0015372	Sar1a	100	98.990	ENSMOCG00000018004	Sar1a	100	98.990	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015372	Sar1a	100	100.000	ENSMUSG00000020088	Sar1a	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0015372	Sar1a	100	100.000	MGP_PahariEiJ_G0030788	Sar1a	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0015372	Sar1a	100	100.000	MGP_SPRETEiJ_G0016183	Sar1a	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSMPUG00000004338	SAR1A	100	99.495	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015372	Sar1a	100	98.990	ENSMLUG00000006626	SAR1A	100	98.990	Myotis_lucifugus
MGP_CAROLIEiJ_G0015372	Sar1a	100	98.990	ENSNGAG00000010545	Sar1a	100	98.990	Nannospalax_galili
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSNLEG00000011243	SAR1A	100	99.495	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015372	Sar1a	96	99.476	ENSODEG00000014517	SAR1A	100	99.476	Octodon_degus
MGP_CAROLIEiJ_G0015372	Sar1a	100	96.465	ENSOANG00000012148	SAR1A	100	96.465	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0015372	Sar1a	100	100.000	ENSOCUG00000004547	SAR1A	100	100.000	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0015372	Sar1a	100	100.000	ENSOGAG00000005040	SAR1A	100	100.000	Otolemur_garnettii
MGP_CAROLIEiJ_G0015372	Sar1a	100	98.990	ENSOARG00000005884	SAR1A	100	98.990	Ovis_aries
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSPPAG00000031193	SAR1A	100	99.495	Pan_paniscus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSPPRG00000023919	-	100	99.495	Panthera_pardus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSPTIG00000015795	SAR1A	100	99.495	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSPTRG00000002584	SAR1A	100	99.495	Pan_troglodytes
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSPANG00000022249	SAR1A	100	99.495	Papio_anubis
MGP_CAROLIEiJ_G0015372	Sar1a	100	96.970	ENSPSIG00000014285	SAR1A	100	96.970	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015372	Sar1a	100	96.970	ENSPCIG00000015309	-	100	96.970	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSPPYG00000002374	SAR1A	100	99.495	Pongo_abelii
MGP_CAROLIEiJ_G0015372	Sar1a	100	100.000	ENSPCOG00000021042	SAR1A	100	100.000	Propithecus_coquereli
MGP_CAROLIEiJ_G0015372	Sar1a	100	100.000	ENSPVAG00000000098	SAR1A	100	100.000	Pteropus_vampyrus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSRBIG00000031590	SAR1A	100	99.495	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSRROG00000044164	SAR1A	100	99.495	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSSBOG00000036189	SAR1A	100	99.495	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015372	Sar1a	100	96.970	ENSSHAG00000008596	SAR1A	100	96.970	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015372	Sar1a	100	98.485	ENSSARG00000000951	SAR1A	100	98.485	Sorex_araneus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSSSCG00000010260	SAR1A	100	99.495	Sus_scrofa
MGP_CAROLIEiJ_G0015372	Sar1a	100	97.475	ENSTGUG00000004523	SAR1A	100	97.475	Taeniopygia_guttata
MGP_CAROLIEiJ_G0015372	Sar1a	100	100.000	ENSTBEG00000008657	SAR1A	100	100.000	Tupaia_belangeri
MGP_CAROLIEiJ_G0015372	Sar1a	100	98.990	ENSTTRG00000006648	SAR1A	100	98.990	Tursiops_truncatus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSUAMG00000003779	SAR1A	100	99.495	Ursus_americanus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSUMAG00000007921	SAR1A	100	99.495	Ursus_maritimus
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSVPAG00000002631	SAR1A	100	99.495	Vicugna_pacos
MGP_CAROLIEiJ_G0015372	Sar1a	100	99.495	ENSVVUG00000021609	SAR1A	100	99.495	Vulpes_vulpes
MGP_CAROLIEiJ_G0015372	Sar1a	100	96.970	ENSXETG00000026979	sar1a	100	96.970	Xenopus_tropicalis