EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015389 (Gene tree)
Gene ID: 110303645
Gene Symbol: Ddx50
Alias: 4933429B04Rik|8430408E17Rik|GU2|RH-II/Gubeta
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 31546 bases
Position: chr10:57124785-57156330
Accession: 110303645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0023134	GUCT	PF08152.12	6.1e-28	1	1
MGP_CAROLIEiJ_P0023134	ResIII	PF04851.15	5.4e-10	1	1
MGP_CAROLIEiJ_P0023134	DEAD	PF00270.29	1.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0023134	-	2527	XM_021174807	MGP_CAROLIEiJ_P0023134	734 (aa)	XP_021030466	UPI000A31721F

Gene Model

Click here to download MGP_CAROLIEiJ_G0015389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0015389	Ddx50	54	31.266	MGP_CAROLIEiJ_G0028986	Ddx47	94	30.175
MGP_CAROLIEiJ_G0015389	Ddx50	54	33.021	MGP_CAROLIEiJ_G0014529	Ddx18	57	34.097
MGP_CAROLIEiJ_G0015389	Ddx50	50	32.620	MGP_CAROLIEiJ_G0017495	-	87	32.533
MGP_CAROLIEiJ_G0015389	Ddx50	50	33.962	MGP_CAROLIEiJ_G0020017	Ddx17	55	33.962
MGP_CAROLIEiJ_G0015389	Ddx50	87	64.198	MGP_CAROLIEiJ_G0015388	Ddx21	77	64.887
MGP_CAROLIEiJ_G0015389	Ddx50	56	34.272	MGP_CAROLIEiJ_G0024700	Ddx27	52	34.129

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015389	Ddx50	92	95.133	ENSG00000107625	DDX50	92	94.395	Homo_sapiens
MGP_CAROLIEiJ_G0015389	Ddx50	93	94.143	ENSAMEG00000017992	DDX50	92	93.373	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015389	Ddx50	92	75.832	ENSANAG00000017785	-	91	75.109	Aotus_nancymaae
MGP_CAROLIEiJ_G0015389	Ddx50	100	94.980	ENSBTAG00000033413	DDX50	92	93.953	Bos_taurus
MGP_CAROLIEiJ_G0015389	Ddx50	92	96.006	ENSCJAG00000018844	DDX50	99	97.082	Callithrix_jacchus
MGP_CAROLIEiJ_G0015389	Ddx50	93	94.583	ENSCAFG00000013776	DDX50	99	93.814	Canis_familiaris
MGP_CAROLIEiJ_G0015389	Ddx50	93	94.583	ENSCAFG00020025977	DDX50	92	93.814	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015389	Ddx50	100	94.708	ENSCHIG00000000285	DDX50	92	93.658	Capra_hircus
MGP_CAROLIEiJ_G0015389	Ddx50	92	94.690	ENSTSYG00000004192	DDX50	99	97.059	Carlito_syrichta
MGP_CAROLIEiJ_G0015389	Ddx50	91	74.889	ENSCAPG00000007230	-	87	77.042	Cavia_aperea
MGP_CAROLIEiJ_G0015389	Ddx50	91	94.651	ENSCPOG00000002131	-	92	94.535	Cavia_porcellus
MGP_CAROLIEiJ_G0015389	Ddx50	82	91.398	ENSCCAG00000030543	DDX50	90	91.398	Cebus_capucinus
MGP_CAROLIEiJ_G0015389	Ddx50	91	95.815	ENSCATG00000032463	DDX50	93	95.815	Cercocebus_atys
MGP_CAROLIEiJ_G0015389	Ddx50	99	64.459	ENSCATG00000039259	-	89	65.345	Cercocebus_atys
MGP_CAROLIEiJ_G0015389	Ddx50	98	70.180	ENSCATG00000035153	-	89	88.401	Cercocebus_atys
MGP_CAROLIEiJ_G0015389	Ddx50	50	86.179	ENSCLAG00000001553	-	79	87.742	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015389	Ddx50	97	68.592	ENSCLAG00000001938	-	91	68.971	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015389	Ddx50	100	95.652	ENSCLAG00000012957	-	100	95.652	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015389	Ddx50	92	95.280	ENSCSAG00000007703	DDX50	92	94.543	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015389	Ddx50	88	92.296	ENSCHOG00000000233	DDX50	97	91.680	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0015389	Ddx50	96	66.106	ENSCANG00000028077	-	91	65.543	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015389	Ddx50	86	70.662	ENSCANG00000018820	-	85	71.583	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015389	Ddx50	99	77.657	ENSCANG00000036450	-	100	77.657	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015389	Ddx50	100	96.875	ENSCGRG00001020223	Ddx50	100	96.875	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015389	Ddx50	100	96.603	ENSCGRG00000015884	Ddx50	100	96.603	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015389	Ddx50	87	87.944	ENSDNOG00000001675	DDX50	100	87.944	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015389	Ddx50	92	94.985	ENSDORG00000007310	Ddx50	92	94.395	Dipodomys_ordii
MGP_CAROLIEiJ_G0015389	Ddx50	90	96.903	ENSETEG00000014069	DDX50	90	96.903	Echinops_telfairi
MGP_CAROLIEiJ_G0015389	Ddx50	93	94.282	ENSEASG00005015595	DDX50	92	93.363	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015389	Ddx50	93	94.282	ENSECAG00000023044	DDX50	92	93.363	Equus_caballus
MGP_CAROLIEiJ_G0015389	Ddx50	86	95.833	ENSEEUG00000005782	DDX50	79	97.297	Erinaceus_europaeus
MGP_CAROLIEiJ_G0015389	Ddx50	92	94.845	ENSFCAG00000012678	DDX50	92	94.109	Felis_catus
MGP_CAROLIEiJ_G0015389	Ddx50	92	88.348	ENSFDAG00000016109	-	91	87.463	Fukomys_damarensis
MGP_CAROLIEiJ_G0015389	Ddx50	51	81.217	ENSGGOG00000041063	-	82	83.386	Gorilla_gorilla
MGP_CAROLIEiJ_G0015389	Ddx50	52	70.312	ENSGGOG00000022568	-	91	78.154	Gorilla_gorilla
MGP_CAROLIEiJ_G0015389	Ddx50	92	95.133	ENSGGOG00000010100	DDX50	99	97.594	Gorilla_gorilla
MGP_CAROLIEiJ_G0015389	Ddx50	92	93.658	ENSHGLG00000013466	DDX50	92	92.920	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015389	Ddx50	92	93.658	ENSHGLG00100017191	DDX50	92	92.920	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015389	Ddx50	82	86.170	ENSHGLG00100006568	-	92	86.170	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015389	Ddx50	100	93.631	ENSSTOG00000021852	-	92	92.636	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015389	Ddx50	100	93.886	ENSJJAG00000023928	-	92	92.910	Jaculus_jaculus
MGP_CAROLIEiJ_G0015389	Ddx50	100	72.568	ENSJJAG00000019626	-	91	72.508	Jaculus_jaculus
MGP_CAROLIEiJ_G0015389	Ddx50	92	95.133	ENSLAFG00000006186	DDX50	92	94.543	Loxodonta_africana
MGP_CAROLIEiJ_G0015389	Ddx50	98	70.278	ENSMFAG00000045339	-	89	87.774	Macaca_fascicularis
MGP_CAROLIEiJ_G0015389	Ddx50	92	95.280	ENSMFAG00000044067	DDX50	92	94.543	Macaca_fascicularis
MGP_CAROLIEiJ_G0015389	Ddx50	80	67.288	ENSMMUG00000045343	-	90	59.735	Macaca_mulatta
MGP_CAROLIEiJ_G0015389	Ddx50	92	95.710	ENSMMUG00000001006	DDX50	100	96.131	Macaca_mulatta
MGP_CAROLIEiJ_G0015389	Ddx50	98	70.994	ENSMNEG00000045530	-	89	88.715	Macaca_nemestrina
MGP_CAROLIEiJ_G0015389	Ddx50	92	88.348	ENSMNEG00000031664	DDX50	92	87.611	Macaca_nemestrina
MGP_CAROLIEiJ_G0015389	Ddx50	86	83.411	ENSMLEG00000041988	-	89	86.822	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015389	Ddx50	92	93.363	ENSMLEG00000037313	DDX50	92	92.625	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015389	Ddx50	56	94.903	ENSMAUG00000022192	Ddx50	100	94.660	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015389	Ddx50	100	88.315	ENSMICG00000017539	DDX50	100	88.315	Microcebus_murinus
MGP_CAROLIEiJ_G0015389	Ddx50	92	96.171	ENSMOCG00000001676	Ddx50	92	96.024	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015389	Ddx50	92	79.649	ENSMODG00000010741	DDX50	92	79.825	Monodelphis_domestica
MGP_CAROLIEiJ_G0015389	Ddx50	100	99.455	ENSMUSG00000020076	Ddx50	100	99.455	Mus_musculus
MGP_CAROLIEiJ_G0015389	Ddx50	100	99.046	MGP_PahariEiJ_G0030805	Ddx50	100	99.046	Mus_pahari
MGP_CAROLIEiJ_G0015389	Ddx50	100	99.455	MGP_SPRETEiJ_G0016200	Ddx50	100	99.455	Mus_spretus
MGP_CAROLIEiJ_G0015389	Ddx50	88	94.281	ENSMPUG00000004589	DDX50	99	94.281	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015389	Ddx50	92	92.625	ENSMLUG00000017590	DDX50	92	91.888	Myotis_lucifugus
MGP_CAROLIEiJ_G0015389	Ddx50	100	96.332	ENSNGAG00000004283	Ddx50	100	96.332	Nannospalax_galili
MGP_CAROLIEiJ_G0015389	Ddx50	88	66.871	ENSNLEG00000035506	-	88	77.570	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015389	Ddx50	92	95.133	ENSNLEG00000011631	DDX50	92	94.395	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015389	Ddx50	92	92.910	ENSOPRG00000001619	DDX50	92	93.058	Ochotona_princeps
MGP_CAROLIEiJ_G0015389	Ddx50	100	95.109	ENSODEG00000014597	-	100	95.109	Octodon_degus
MGP_CAROLIEiJ_G0015389	Ddx50	93	67.001	ENSOANG00000004776	DDX50	80	69.291	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0015389	Ddx50	100	90.489	ENSOCUG00000002879	DDX50	95	93.796	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0015389	Ddx50	92	94.838	ENSOGAG00000001844	DDX50	92	94.100	Otolemur_garnettii
MGP_CAROLIEiJ_G0015389	Ddx50	100	94.708	ENSOARG00000005264	DDX50	92	93.658	Ovis_aries
MGP_CAROLIEiJ_G0015389	Ddx50	92	94.985	ENSPPAG00000040723	DDX50	92	94.248	Pan_paniscus
MGP_CAROLIEiJ_G0015389	Ddx50	52	70.263	ENSPPAG00000026788	-	90	78.193	Pan_paniscus
MGP_CAROLIEiJ_G0015389	Ddx50	92	94.845	ENSPPRG00000015826	DDX50	93	95.802	Panthera_pardus
MGP_CAROLIEiJ_G0015389	Ddx50	92	94.845	ENSPTIG00000008454	DDX50	93	95.802	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0015389	Ddx50	92	94.985	ENSPTRG00000002562	DDX50	92	94.248	Pan_troglodytes
MGP_CAROLIEiJ_G0015389	Ddx50	52	70.263	ENSPTRG00000044913	-	99	71.053	Pan_troglodytes
MGP_CAROLIEiJ_G0015389	Ddx50	92	87.463	ENSPANG00000022143	-	92	86.726	Papio_anubis
MGP_CAROLIEiJ_G0015389	Ddx50	92	94.978	ENSPEMG00000020899	-	92	94.978	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0015389	Ddx50	98	75.620	ENSPCIG00000016036	DDX50	94	79.148	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015389	Ddx50	83	95.922	ENSPPYG00000002390	DDX50	91	95.106	Pongo_abelii
MGP_CAROLIEiJ_G0015389	Ddx50	84	79.837	ENSPCAG00000009692	DDX50	100	79.837	Procavia_capensis
MGP_CAROLIEiJ_G0015389	Ddx50	79	84.333	ENSPCOG00000012574	DDX50	87	84.333	Propithecus_coquereli
MGP_CAROLIEiJ_G0015389	Ddx50	86	90.083	ENSPVAG00000009519	DDX50	78	90.358	Pteropus_vampyrus
MGP_CAROLIEiJ_G0015389	Ddx50	100	98.501	ENSRNOG00000000396	Ddx50	100	98.501	Rattus_norvegicus
MGP_CAROLIEiJ_G0015389	Ddx50	99	66.393	ENSRBIG00000036573	-	92	65.774	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015389	Ddx50	99	64.228	ENSRBIG00000039673	-	90	63.382	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015389	Ddx50	87	93.468	ENSRBIG00000042841	-	98	95.704	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015389	Ddx50	52	68.668	ENSRROG00000031940	-	87	73.538	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015389	Ddx50	99	63.537	ENSRROG00000022853	-	91	62.667	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015389	Ddx50	92	95.562	ENSRROG00000032158	DDX50	100	95.988	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015389	Ddx50	92	83.776	ENSSBOG00000014441	DDX50	99	84.286	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015389	Ddx50	75	71.043	ENSSHAG00000005334	-	80	67.423	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015389	Ddx50	88	80.305	ENSSHAG00000005690	DDX50	91	80.243	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015389	Ddx50	100	77.582	ENSSARG00000013553	DDX50	88	84.317	Sorex_araneus
MGP_CAROLIEiJ_G0015389	Ddx50	100	93.623	ENSSSCG00000010246	DDX50	92	92.920	Sus_scrofa
MGP_CAROLIEiJ_G0015389	Ddx50	96	73.239	ENSTBEG00000001085	DDX50	92	72.083	Tupaia_belangeri
MGP_CAROLIEiJ_G0015389	Ddx50	100	87.924	ENSTTRG00000012408	DDX50	99	87.924	Tursiops_truncatus
MGP_CAROLIEiJ_G0015389	Ddx50	93	94.436	ENSUAMG00000010976	DDX50	99	97.611	Ursus_americanus
MGP_CAROLIEiJ_G0015389	Ddx50	93	94.436	ENSUMAG00000007726	DDX50	92	93.667	Ursus_maritimus
MGP_CAROLIEiJ_G0015389	Ddx50	92	93.805	ENSVPAG00000000626	DDX50	92	93.215	Vicugna_pacos
MGP_CAROLIEiJ_G0015389	Ddx50	82	89.055	ENSVVUG00000020366	DDX50	98	97.326	Vulpes_vulpes