EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015391 (Gene tree)
Gene ID: 110302968
Gene Symbol: Ccar1
Alias: 2610511G16Rik|9430036H15Rik|Carp1
Full Name: cell division cycle and apoptosis regulator 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 48981 bases
Position: chr10:57242272-57291252
Accession: 110302968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0023138	S1-like	PF14444.6	7.2e-32	1	1
MGP_CAROLIEiJ_P0023138	SAP	PF02037.27	8.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0023138	-	4498	XM_021173826	MGP_CAROLIEiJ_P0023138	1146 (aa)	XP_021029485	UPI000A31979D

Gene Model

Click here to download MGP_CAROLIEiJ_G0015391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015391's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.435	ENSG00000060339	CCAR1	100	96.491	Homo_sapiens
MGP_CAROLIEiJ_G0015391	Ccar1	70	39.556	ENSG00000158941	CCAR2	80	43.913	Homo_sapiens
MGP_CAROLIEiJ_G0015391	Ccar1	98	63.565	ENSAPOG00000019427	ccar1	99	62.258	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.613	ENSAMEG00000018003	CCAR1	100	94.613	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015391	Ccar1	98	63.028	ENSAOCG00000004413	ccar1	98	85.714	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0015391	Ccar1	98	64.609	ENSAPEG00000013204	ccar1	100	65.826	Amphiprion_percula
MGP_CAROLIEiJ_G0015391	Ccar1	99	66.867	ENSATEG00000001698	ccar1	99	65.550	Anabas_testudineus
MGP_CAROLIEiJ_G0015391	Ccar1	99	83.217	ENSAPLG00000013870	CCAR1	69	88.818	Anas_platyrhynchos
MGP_CAROLIEiJ_G0015391	Ccar1	100	86.285	ENSACAG00000009927	CCAR1	100	86.198	Anolis_carolinensis
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.435	ENSANAG00000023002	CCAR1	100	94.435	Aotus_nancymaae
MGP_CAROLIEiJ_G0015391	Ccar1	98	64.567	ENSACLG00000011175	ccar1	99	64.829	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015391	Ccar1	98	68.662	ENSAMXG00000001383	ccar1	98	67.340	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015391	Ccar1	100	93.386	ENSBTAG00000033457	CCAR1	100	93.386	Bos_taurus
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.087	ENSCJAG00000018912	CCAR1	100	94.174	Callithrix_jacchus
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.783	ENSCAFG00000013761	CCAR1	100	94.783	Canis_familiaris
MGP_CAROLIEiJ_G0015391	Ccar1	100	93.913	ENSCAFG00020026013	CCAR1	100	93.913	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.343	ENSCHIG00000000354	CCAR1	100	94.343	Capra_hircus
MGP_CAROLIEiJ_G0015391	Ccar1	100	93.304	ENSTSYG00000010684	CCAR1	100	93.304	Carlito_syrichta
MGP_CAROLIEiJ_G0015391	Ccar1	78	94.595	ENSCAPG00000016932	CCAR1	99	88.750	Cavia_aperea
MGP_CAROLIEiJ_G0015391	Ccar1	100	93.652	ENSCPOG00000004124	CCAR1	100	93.652	Cavia_porcellus
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.435	ENSCCAG00000020659	CCAR1	100	94.435	Cebus_capucinus
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.261	ENSCATG00000042598	CCAR1	100	94.261	Cercocebus_atys
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.087	ENSCLAG00000011807	CCAR1	100	94.087	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.609	ENSCSAG00000007643	CCAR1	100	94.609	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015391	Ccar1	89	97.227	ENSCHOG00000002868	CCAR1	89	97.227	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0015391	Ccar1	100	88.609	ENSCPBG00000019635	CCAR1	100	88.405	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015391	Ccar1	100	97.304	ENSCGRG00001019471	Ccar1	100	97.304	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015391	Ccar1	100	97.217	ENSCGRG00000017538	Ccar1	98	97.217	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015391	Ccar1	98	67.132	ENSCSEG00000006707	ccar1	99	66.261	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0015391	Ccar1	98	65.202	ENSCVAG00000014095	ccar1	99	64.547	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015391	Ccar1	99	64.971	ENSDARG00000074759	ccar1	99	64.583	Danio_rerio
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.000	ENSDNOG00000007499	CCAR1	100	94.000	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015391	Ccar1	89	85.677	ENSETEG00000013025	CCAR1	89	85.417	Echinops_telfairi
MGP_CAROLIEiJ_G0015391	Ccar1	73	61.759	ENSEBUG00000014935	ccar1	75	66.816	Eptatretus_burgeri
MGP_CAROLIEiJ_G0015391	Ccar1	100	85.553	ENSEASG00005015474	CCAR1	95	91.731	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.783	ENSECAG00000016291	CCAR1	100	94.783	Equus_caballus
MGP_CAROLIEiJ_G0015391	Ccar1	91	91.300	ENSEEUG00000013822	CCAR1	90	100.000	Erinaceus_europaeus
MGP_CAROLIEiJ_G0015391	Ccar1	64	31.878	ENSELUG00000004179	ccar2	57	38.356	Esox_lucius
MGP_CAROLIEiJ_G0015391	Ccar1	88	74.014	ENSELUG00000022633	ccar1	99	61.780	Esox_lucius
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.783	ENSFCAG00000012676	CCAR1	100	94.783	Felis_catus
MGP_CAROLIEiJ_G0015391	Ccar1	98	86.854	ENSFALG00000013015	CCAR1	99	87.467	Ficedula_albicollis
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.174	ENSFDAG00000007880	CCAR1	100	94.174	Fukomys_damarensis
MGP_CAROLIEiJ_G0015391	Ccar1	98	63.565	ENSFHEG00000002061	ccar1	98	62.510	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0015391	Ccar1	98	62.108	ENSGMOG00000006757	ccar1	100	61.505	Gadus_morhua
MGP_CAROLIEiJ_G0015391	Ccar1	98	63.412	ENSGAFG00000009459	ccar1	99	63.380	Gambusia_affinis
MGP_CAROLIEiJ_G0015391	Ccar1	99	65.266	ENSGACG00000007905	ccar1	69	72.581	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0015391	Ccar1	100	88.435	ENSGAGG00000022022	CCAR1	100	88.230	Gopherus_agassizii
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.348	ENSGGOG00000002776	CCAR1	100	94.348	Gorilla_gorilla
MGP_CAROLIEiJ_G0015391	Ccar1	98	64.965	ENSHBUG00000022896	ccar1	99	65.317	Haplochromis_burtoni
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.087	ENSHGLG00000012835	CCAR1	100	94.087	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015391	Ccar1	100	92.870	ENSHGLG00100017513	CCAR1	100	92.870	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015391	Ccar1	98	61.713	ENSHCOG00000004083	ccar1	68	69.863	Hippocampus_comes
MGP_CAROLIEiJ_G0015391	Ccar1	98	65.789	ENSIPUG00000005123	ccar1	99	64.298	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015391	Ccar1	63	47.945	ENSIPUG00000006666	ccar2	70	48.611	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.348	ENSSTOG00000001539	CCAR1	100	94.348	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015391	Ccar1	100	92.341	ENSJJAG00000024055	Ccar1	100	92.515	Jaculus_jaculus
MGP_CAROLIEiJ_G0015391	Ccar1	98	63.126	ENSKMAG00000004397	ccar1	99	60.985	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0015391	Ccar1	76	46.916	ENSLACG00000011333	CCAR2	69	43.579	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015391	Ccar1	100	76.850	ENSLACG00000015608	CCAR1	100	77.644	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015391	Ccar1	75	39.865	ENSLOCG00000015653	-	59	41.463	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0015391	Ccar1	99	65.539	ENSLOCG00000009307	ccar1	88	68.790	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0015391	Ccar1	100	95.118	ENSLAFG00000006177	CCAR1	100	95.118	Loxodonta_africana
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.696	ENSMFAG00000035410	CCAR1	100	94.696	Macaca_fascicularis
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.696	ENSMMUG00000016652	CCAR1	100	94.696	Macaca_mulatta
MGP_CAROLIEiJ_G0015391	Ccar1	100	93.826	ENSMNEG00000009193	CCAR1	100	93.826	Macaca_nemestrina
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.696	ENSMLEG00000033748	CCAR1	100	94.696	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015391	Ccar1	98	63.108	ENSMAMG00000000309	ccar1	99	63.194	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015391	Ccar1	98	64.567	ENSMZEG00005027683	ccar1	99	64.829	Maylandia_zebra
MGP_CAROLIEiJ_G0015391	Ccar1	99	89.349	ENSMGAG00000004166	CCAR1	99	89.525	Meleagris_gallopavo
MGP_CAROLIEiJ_G0015391	Ccar1	100	88.783	ENSMICG00000007448	CCAR1	100	88.261	Microcebus_murinus
MGP_CAROLIEiJ_G0015391	Ccar1	100	96.783	ENSMOCG00000007793	Ccar1	100	96.783	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015391	Ccar1	98	65.351	ENSMMOG00000010483	ccar1	99	65.088	Mola_mola
MGP_CAROLIEiJ_G0015391	Ccar1	100	89.826	ENSMODG00000017358	CCAR1	100	89.826	Monodelphis_domestica
MGP_CAROLIEiJ_G0015391	Ccar1	99	62.992	ENSMALG00000018301	ccar1	99	62.963	Monopterus_albus
MGP_CAROLIEiJ_G0015391	Ccar1	100	99.389	ENSMUSG00000020074	Ccar1	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0015391	Ccar1	100	98.953	MGP_PahariEiJ_G0030807	Ccar1	100	98.953	Mus_pahari
MGP_CAROLIEiJ_G0015391	Ccar1	100	99.302	MGP_SPRETEiJ_G0016202	Ccar1	100	99.302	Mus_spretus
MGP_CAROLIEiJ_G0015391	Ccar1	100	92.528	ENSMPUG00000004618	CCAR1	100	92.528	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.087	ENSMLUG00000001270	CCAR1	100	94.087	Myotis_lucifugus
MGP_CAROLIEiJ_G0015391	Ccar1	100	95.043	ENSNGAG00000023517	Ccar1	100	95.043	Nannospalax_galili
MGP_CAROLIEiJ_G0015391	Ccar1	98	65.493	ENSNBRG00000020668	ccar1	99	66.169	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.522	ENSNLEG00000011679	CCAR1	100	94.522	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015391	Ccar1	71	100.000	ENSMEUG00000012076	-	80	100.000	Notamacropus_eugenii
MGP_CAROLIEiJ_G0015391	Ccar1	62	41.379	ENSMEUG00000002163	CCAR2	55	42.857	Notamacropus_eugenii
MGP_CAROLIEiJ_G0015391	Ccar1	77	98.214	ENSOPRG00000016682	CCAR1	77	98.214	Ochotona_princeps
MGP_CAROLIEiJ_G0015391	Ccar1	77	36.511	ENSODEG00000008466	CCAR2	54	40.288	Octodon_degus
MGP_CAROLIEiJ_G0015391	Ccar1	98	66.842	ENSONIG00000018419	ccar1	100	66.754	Oreochromis_niloticus
MGP_CAROLIEiJ_G0015391	Ccar1	56	94.118	ENSOANG00000015048	-	92	93.981	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0015391	Ccar1	98	62.936	ENSORLG00020004040	ccar1	99	68.593	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0015391	Ccar1	96	67.742	ENSORLG00015009157	ccar1	96	67.835	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015391	Ccar1	98	63.222	ENSOMEG00000003998	ccar1	98	63.573	Oryzias_melastigma
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.435	ENSOGAG00000013294	CCAR1	100	94.435	Otolemur_garnettii
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.256	ENSOARG00000005203	CCAR1	100	94.256	Ovis_aries
MGP_CAROLIEiJ_G0015391	Ccar1	100	87.164	ENSPPAG00000035962	CCAR1	96	96.875	Pan_paniscus
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.783	ENSPPRG00000022293	CCAR1	100	94.783	Panthera_pardus
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.783	ENSPTIG00000009648	CCAR1	100	94.783	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.522	ENSPTRG00000002560	CCAR1	100	94.522	Pan_troglodytes
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.696	ENSPANG00000022123	CCAR1	100	94.696	Papio_anubis
MGP_CAROLIEiJ_G0015391	Ccar1	99	65.880	ENSPKIG00000009310	ccar1	99	66.405	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015391	Ccar1	75	41.907	ENSPSIG00000017945	CCAR2	65	38.266	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015391	Ccar1	100	88.783	ENSPSIG00000005136	CCAR1	100	88.870	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015391	Ccar1	98	65.428	ENSPMGG00000010385	ccar1	70	72.593	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0015391	Ccar1	100	96.957	ENSPEMG00000015377	-	100	96.957	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0015391	Ccar1	69	62.022	ENSPMAG00000001814	ccar1	89	60.625	Petromyzon_marinus
MGP_CAROLIEiJ_G0015391	Ccar1	100	90.609	ENSPCIG00000016044	CCAR1	100	90.609	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015391	Ccar1	99	61.322	ENSPFOG00000003164	ccar1	98	62.713	Poecilia_formosa
MGP_CAROLIEiJ_G0015391	Ccar1	98	64.983	ENSPLAG00000000212	ccar1	99	65.712	Poecilia_latipinna
MGP_CAROLIEiJ_G0015391	Ccar1	98	65.432	ENSPMEG00000003026	ccar1	99	64.881	Poecilia_mexicana
MGP_CAROLIEiJ_G0015391	Ccar1	98	65.617	ENSPREG00000018399	ccar1	98	64.675	Poecilia_reticulata
MGP_CAROLIEiJ_G0015391	Ccar1	70	39.333	ENSPPYG00000018426	CCAR2	54	40.072	Pongo_abelii
MGP_CAROLIEiJ_G0015391	Ccar1	100	95.043	ENSPPYG00000002392	CCAR1	100	95.043	Pongo_abelii
MGP_CAROLIEiJ_G0015391	Ccar1	85	97.093	ENSPCAG00000010028	CCAR1	85	97.093	Procavia_capensis
MGP_CAROLIEiJ_G0015391	Ccar1	87	97.009	ENSPCOG00000020489	CCAR1	99	97.009	Propithecus_coquereli
MGP_CAROLIEiJ_G0015391	Ccar1	59	96.927	ENSPVAG00000017798	CCAR1	88	96.927	Pteropus_vampyrus
MGP_CAROLIEiJ_G0015391	Ccar1	98	64.965	ENSPNYG00000007300	ccar1	99	65.317	Pundamilia_nyererei
MGP_CAROLIEiJ_G0015391	Ccar1	98	67.841	ENSPNAG00000026936	ccar1	99	67.848	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0015391	Ccar1	100	98.519	ENSRNOG00000000397	Ccar1	100	98.519	Rattus_norvegicus
MGP_CAROLIEiJ_G0015391	Ccar1	84	94.306	ENSRBIG00000042226	CCAR1	99	94.306	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.609	ENSRROG00000039231	CCAR1	100	94.609	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015391	Ccar1	99	93.082	ENSSBOG00000030420	CCAR1	96	96.691	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015391	Ccar1	100	90.625	ENSSHAG00000007504	CCAR1	100	90.625	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015391	Ccar1	99	66.192	ENSSFOG00015002717	ccar1	99	65.635	Scleropages_formosus
MGP_CAROLIEiJ_G0015391	Ccar1	98	64.411	ENSSMAG00000002119	ccar1	98	62.258	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015391	Ccar1	99	61.334	ENSSDUG00000009187	ccar1	99	63.115	Seriola_dumerili
MGP_CAROLIEiJ_G0015391	Ccar1	99	65.060	ENSSLDG00000019960	ccar1	99	65.240	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015391	Ccar1	94	96.724	ENSSARG00000002783	CCAR1	94	96.724	Sorex_araneus
MGP_CAROLIEiJ_G0015391	Ccar1	91	88.676	ENSSPUG00000001288	-	100	88.676	Sphenodon_punctatus
MGP_CAROLIEiJ_G0015391	Ccar1	98	66.608	ENSSPAG00000021364	ccar1	99	66.900	Stegastes_partitus
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.435	ENSSSCG00000010243	CCAR1	100	94.435	Sus_scrofa
MGP_CAROLIEiJ_G0015391	Ccar1	100	87.663	ENSTGUG00000003765	-	100	88.097	Taeniopygia_guttata
MGP_CAROLIEiJ_G0015391	Ccar1	98	65.789	ENSTRUG00000013280	ccar1	98	65.817	Takifugu_rubripes
MGP_CAROLIEiJ_G0015391	Ccar1	98	63.748	ENSTNIG00000008667	ccar1	70	72.829	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0015391	Ccar1	66	100.000	ENSTBEG00000005800	-	66	100.000	Tupaia_belangeri
MGP_CAROLIEiJ_G0015391	Ccar1	92	94.256	ENSTTRG00000001567	CCAR1	92	94.256	Tursiops_truncatus
MGP_CAROLIEiJ_G0015391	Ccar1	100	93.739	ENSUAMG00000016493	CCAR1	100	93.739	Ursus_americanus
MGP_CAROLIEiJ_G0015391	Ccar1	100	93.739	ENSUMAG00000007561	CCAR1	100	93.739	Ursus_maritimus
MGP_CAROLIEiJ_G0015391	Ccar1	88	94.521	ENSVPAG00000011822	CCAR1	88	94.521	Vicugna_pacos
MGP_CAROLIEiJ_G0015391	Ccar1	100	94.783	ENSVVUG00000020327	CCAR1	100	94.783	Vulpes_vulpes
MGP_CAROLIEiJ_G0015391	Ccar1	100	71.268	ENSXETG00000008844	ccar1	100	70.751	Xenopus_tropicalis
MGP_CAROLIEiJ_G0015391	Ccar1	98	65.445	ENSXCOG00000012603	ccar1	99	65.214	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0015391	Ccar1	98	65.650	ENSXMAG00000002765	ccar1	99	65.418	Xiphophorus_maculatus