EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015538 (Gene tree)
Gene ID: 110303032
Gene Symbol: Polrmt
Alias: 1110018N15Rik
Full Name: RNA polymerase mitochondrial
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 10410 bases
Position: chr10:73714936-73725345
Accession: 110303032
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0023733	RNA_pol	PF00940.19	1.2e-166	1	1
MGP_CAROLIEiJ_P0023734	RNA_pol	PF00940.19	1.3e-166	1	1
MGP_CAROLIEiJ_P0023730	RNA_pol	PF00940.19	4.6e-134	1	2
MGP_CAROLIEiJ_P0023730	RNA_pol	PF00940.19	4.6e-134	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0023739	-	1219	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0023738	-	652	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0023729	-	4292	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0023733	-	3535	-	MGP_CAROLIEiJ_P0023733	1133 (aa)	-	-
MGP_CAROLIEiJ_T0023732	-	374	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0023731	-	3935	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0023730	-	1287	-	MGP_CAROLIEiJ_P0023730	392 (aa)	-	-
MGP_CAROLIEiJ_T0023737	-	3750	-	MGP_CAROLIEiJ_P0023737	903 (aa)	-	-
MGP_CAROLIEiJ_T0023736	-	703	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0023735	-	394	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0023734	-	3755	XM_021173926	MGP_CAROLIEiJ_P0023734	1207 (aa)	XP_021029585	UPI000A31A8DE
MGP_CAROLIEiJ_T0023740	-	602	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0023741	-	411	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0015538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015538	Polrmt	100	78.744	ENSG00000099821	POLRMT	94	78.744	Homo_sapiens
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.125	ENSAPOG00000003942	polrmt	74	63.175	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0015538	Polrmt	100	78.560	ENSAMEG00000002745	POLRMT	94	78.560	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.432	ENSACIG00000016078	polrmt	97	62.540	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.587	ENSAOCG00000020208	polrmt	94	57.103	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.818	ENSAPEG00000007949	polrmt	92	56.825	Amphiprion_percula
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.125	ENSATEG00000024025	polrmt	91	62.701	Anabas_testudineus
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.609	ENSAPLG00000003051	POLRMT	99	65.335	Anas_platyrhynchos
MGP_CAROLIEiJ_G0015538	Polrmt	99	75.684	ENSANAG00000032916	POLRMT	94	75.684	Aotus_nancymaae
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.529	ENSACLG00000003766	polrmt	76	63.291	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015538	Polrmt	99	61.905	ENSAMXG00000018258	polrmt	95	61.905	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015538	Polrmt	100	78.378	ENSBTAG00000015051	POLRMT	96	78.378	Bos_taurus
MGP_CAROLIEiJ_G0015538	Polrmt	100	41.043	WBGene00013680	rpom-1	53	41.760	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0015538	Polrmt	99	74.396	ENSCJAG00000012913	POLRMT	94	74.396	Callithrix_jacchus
MGP_CAROLIEiJ_G0015538	Polrmt	100	78.710	ENSCAFG00000019711	POLRMT	94	78.710	Canis_familiaris
MGP_CAROLIEiJ_G0015538	Polrmt	100	78.710	ENSCAFG00020016843	POLRMT	94	78.710	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015538	Polrmt	100	78.617	ENSCHIG00000013267	POLRMT	94	78.617	Capra_hircus
MGP_CAROLIEiJ_G0015538	Polrmt	94	71.759	ENSCAPG00000016900	POLRMT	100	71.605	Cavia_aperea
MGP_CAROLIEiJ_G0015538	Polrmt	100	72.742	ENSCPOG00000023061	POLRMT	96	72.742	Cavia_porcellus
MGP_CAROLIEiJ_G0015538	Polrmt	100	74.718	ENSCCAG00000025014	POLRMT	94	74.718	Cebus_capucinus
MGP_CAROLIEiJ_G0015538	Polrmt	100	78.422	ENSCATG00000040393	POLRMT	94	78.422	Cercocebus_atys
MGP_CAROLIEiJ_G0015538	Polrmt	100	70.208	ENSCLAG00000007473	POLRMT	76	76.129	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015538	Polrmt	100	78.261	ENSCSAG00000012942	POLRMT	94	78.261	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.989	ENSCPBG00000009869	POLRMT	95	66.559	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015538	Polrmt	62	49.194	ENSCING00000024450	-	100	50.000	Ciona_intestinalis
MGP_CAROLIEiJ_G0015538	Polrmt	100	47.344	ENSCSAVG00000000440	-	99	44.132	Ciona_savignyi
MGP_CAROLIEiJ_G0015538	Polrmt	100	77.939	ENSCANG00000038011	POLRMT	94	77.939	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015538	Polrmt	95	87.801	ENSCGRG00001021311	Polrmt	100	87.801	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015538	Polrmt	100	82.258	ENSCGRG00000011134	Polrmt	100	81.457	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.641	ENSCSEG00000002734	polrmt	94	62.641	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.432	ENSCVAG00000005949	polrmt	99	57.081	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.663	ENSDARG00000101220	polrmt	91	63.622	Danio_rerio
MGP_CAROLIEiJ_G0015538	Polrmt	99	75.347	ENSDORG00000014125	Polrmt	99	77.760	Dipodomys_ordii
MGP_CAROLIEiJ_G0015538	Polrmt	100	53.563	FBgn0261938	mtRNApol	72	56.140	Drosophila_melanogaster
MGP_CAROLIEiJ_G0015538	Polrmt	100	70.096	ENSETEG00000003476	POLRMT	94	70.096	Echinops_telfairi
MGP_CAROLIEiJ_G0015538	Polrmt	100	60.046	ENSEBUG00000013453	-	91	59.490	Eptatretus_burgeri
MGP_CAROLIEiJ_G0015538	Polrmt	100	80.417	ENSEASG00005021493	POLRMT	94	80.417	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015538	Polrmt	100	80.417	ENSECAG00000032711	POLRMT	94	80.417	Equus_caballus
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.098	ENSELUG00000019319	polrmt	76	53.016	Esox_lucius
MGP_CAROLIEiJ_G0015538	Polrmt	100	80.257	ENSFCAG00000018808	POLRMT	94	80.257	Felis_catus
MGP_CAROLIEiJ_G0015538	Polrmt	80	65.021	ENSFALG00000013910	POLRMT	99	65.021	Ficedula_albicollis
MGP_CAROLIEiJ_G0015538	Polrmt	100	75.523	ENSFDAG00000020312	POLRMT	100	58.340	Fukomys_damarensis
MGP_CAROLIEiJ_G0015538	Polrmt	99	61.343	ENSFHEG00000021239	polrmt	86	56.936	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0015538	Polrmt	100	56.452	ENSGMOG00000011829	polrmt	97	60.800	Gadus_morhua
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.442	ENSGALG00000001377	POLRMT	94	65.545	Gallus_gallus
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.299	ENSGAFG00000003953	polrmt	96	58.665	Gambusia_affinis
MGP_CAROLIEiJ_G0015538	Polrmt	100	58.065	ENSGACG00000012957	polrmt	92	60.737	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.785	ENSGAGG00000005522	POLRMT	96	65.287	Gopherus_agassizii
MGP_CAROLIEiJ_G0015538	Polrmt	81	81.988	ENSGGOG00000023264	-	95	81.988	Gorilla_gorilla
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.529	ENSHBUG00000010005	polrmt	74	63.449	Haplochromis_burtoni
MGP_CAROLIEiJ_G0015538	Polrmt	100	72.055	ENSHGLG00000019286	POLRMT	87	68.768	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015538	Polrmt	100	75.806	ENSHGLG00100005762	POLRMT	100	63.263	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015538	Polrmt	100	60.508	ENSHCOG00000001565	polrmt	94	65.188	Hippocampus_comes
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.839	ENSIPUG00000000789	polrmt	96	46.970	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015538	Polrmt	98	82.412	ENSSTOG00000003431	POLRMT	100	82.660	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015538	Polrmt	99	76.935	ENSJJAG00000012916	Polrmt	99	76.726	Jaculus_jaculus
MGP_CAROLIEiJ_G0015538	Polrmt	100	60.277	ENSKMAG00000004426	polrmt	92	60.794	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.894	ENSLBEG00000016529	polrmt	74	62.857	Labrus_bergylta
MGP_CAROLIEiJ_G0015538	Polrmt	99	61.432	ENSLACG00000011518	POLRMT	96	63.275	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015538	Polrmt	97	52.532	ENSLOCG00000005222	polrmt	93	52.532	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0015538	Polrmt	99	77.885	ENSLAFG00000001860	POLRMT	94	77.885	Loxodonta_africana
MGP_CAROLIEiJ_G0015538	Polrmt	100	78.744	ENSMFAG00000031466	POLRMT	94	78.744	Macaca_fascicularis
MGP_CAROLIEiJ_G0015538	Polrmt	100	78.422	ENSMNEG00000039129	POLRMT	94	78.422	Macaca_nemestrina
MGP_CAROLIEiJ_G0015538	Polrmt	82	85.366	ENSMLEG00000037404	POLRMT	99	78.992	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.187	ENSMAMG00000019284	polrmt	75	63.550	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.529	ENSMZEG00005009932	polrmt	76	63.291	Maylandia_zebra
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.894	ENSMGAG00000003243	POLRMT	96	65.008	Meleagris_gallopavo
MGP_CAROLIEiJ_G0015538	Polrmt	100	88.283	ENSMAUG00000019392	Polrmt	100	88.283	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015538	Polrmt	100	80.161	ENSMICG00000016701	POLRMT	94	80.161	Microcebus_murinus
MGP_CAROLIEiJ_G0015538	Polrmt	100	84.984	ENSMOCG00000008868	Polrmt	100	79.868	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015538	Polrmt	89	58.421	ENSMMOG00000000705	polrmt	90	58.421	Mola_mola
MGP_CAROLIEiJ_G0015538	Polrmt	99	66.292	ENSMODG00000006478	POLRMT	93	66.292	Monodelphis_domestica
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.201	ENSMALG00000021224	polrmt	74	63.768	Monopterus_albus
MGP_CAROLIEiJ_G0015538	Polrmt	100	97.753	ENSMUSG00000020329	Polrmt	100	97.753	Mus_musculus
MGP_CAROLIEiJ_G0015538	Polrmt	100	96.429	MGP_PahariEiJ_G0030951	Polrmt	100	96.629	Mus_pahari
MGP_CAROLIEiJ_G0015538	Polrmt	100	97.913	MGP_SPRETEiJ_G0016356	Polrmt	100	97.913	Mus_spretus
MGP_CAROLIEiJ_G0015538	Polrmt	100	78.226	ENSMPUG00000009910	POLRMT	94	78.226	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015538	Polrmt	100	80.000	ENSMLUG00000009223	POLRMT	100	68.915	Myotis_lucifugus
MGP_CAROLIEiJ_G0015538	Polrmt	100	88.122	ENSNGAG00000005498	Polrmt	100	88.387	Nannospalax_galili
MGP_CAROLIEiJ_G0015538	Polrmt	97	62.648	ENSNBRG00000023530	polrmt	73	65.653	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0015538	Polrmt	100	70.507	ENSNLEG00000000718	POLRMT	100	65.242	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015538	Polrmt	84	74.054	ENSOPRG00000013579	POLRMT	73	77.427	Ochotona_princeps
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.125	ENSONIG00000002405	polrmt	97	63.462	Oreochromis_niloticus
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.673	ENSORLG00000004329	polrmt	90	63.074	Oryzias_latipes
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.442	ENSORLG00020003896	polrmt	92	64.966	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.442	ENSORLG00015022238	polrmt	89	63.074	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015538	Polrmt	100	63.510	ENSOMEG00000008292	polrmt	95	64.127	Oryzias_melastigma
MGP_CAROLIEiJ_G0015538	Polrmt	100	81.701	ENSOGAG00000007912	POLRMT	94	81.701	Otolemur_garnettii
MGP_CAROLIEiJ_G0015538	Polrmt	100	69.388	ENSOARG00000008898	POLRMT	92	77.226	Ovis_aries
MGP_CAROLIEiJ_G0015538	Polrmt	99	75.362	ENSPPAG00000043321	-	93	75.362	Pan_paniscus
MGP_CAROLIEiJ_G0015538	Polrmt	100	76.083	ENSPPAG00000030853	POLRMT	94	76.083	Pan_paniscus
MGP_CAROLIEiJ_G0015538	Polrmt	100	71.625	ENSPPRG00000001547	POLRMT	93	78.541	Panthera_pardus
MGP_CAROLIEiJ_G0015538	Polrmt	100	76.973	ENSPTRG00000010157	POLRMT	90	76.973	Pan_troglodytes
MGP_CAROLIEiJ_G0015538	Polrmt	99	75.684	ENSPTRG00000039638	-	94	75.684	Pan_troglodytes
MGP_CAROLIEiJ_G0015538	Polrmt	100	78.422	ENSPANG00000006649	POLRMT	94	78.422	Papio_anubis
MGP_CAROLIEiJ_G0015538	Polrmt	100	60.508	ENSPKIG00000024580	polrmt	92	62.222	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015538	Polrmt	100	60.739	ENSPMGG00000014627	polrmt	84	62.063	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0015538	Polrmt	100	89.355	ENSPEMG00000011671	Polrmt	100	89.085	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0015538	Polrmt	70	65.106	ENSPMAG00000005070	-	100	65.106	Petromyzon_marinus
MGP_CAROLIEiJ_G0015538	Polrmt	100	65.224	ENSPCIG00000006103	POLRMT	96	65.224	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.609	ENSPFOG00000003911	polrmt	100	57.787	Poecilia_formosa
MGP_CAROLIEiJ_G0015538	Polrmt	84	59.273	ENSPLAG00000005743	polrmt	95	59.273	Poecilia_latipinna
MGP_CAROLIEiJ_G0015538	Polrmt	92	40.314	ENSPMEG00000011484	polrmt	95	52.455	Poecilia_mexicana
MGP_CAROLIEiJ_G0015538	Polrmt	100	60.739	ENSPMEG00000008947	polrmt	100	57.977	Poecilia_mexicana
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.839	ENSPREG00000007650	polrmt	95	57.480	Poecilia_reticulata
MGP_CAROLIEiJ_G0015538	Polrmt	93	79.016	ENSPPYG00000009282	POLRMT	100	74.167	Pongo_abelii
MGP_CAROLIEiJ_G0015538	Polrmt	100	64.309	ENSPCAG00000010816	POLRMT	100	58.434	Procavia_capensis
MGP_CAROLIEiJ_G0015538	Polrmt	100	74.839	ENSPCOG00000014539	POLRMT	94	74.839	Propithecus_coquereli
MGP_CAROLIEiJ_G0015538	Polrmt	100	77.134	ENSPVAG00000008403	POLRMT	94	77.134	Pteropus_vampyrus
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.356	ENSPNYG00000020790	polrmt	74	63.175	Pundamilia_nyererei
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.839	ENSPNAG00000019790	polrmt	92	65.529	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0015538	Polrmt	100	88.567	ENSRNOG00000024879	Polrmt	100	88.567	Rattus_norvegicus
MGP_CAROLIEiJ_G0015538	Polrmt	100	77.778	ENSRBIG00000006728	POLRMT	94	77.778	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015538	Polrmt	100	77.939	ENSRROG00000040809	POLRMT	94	77.939	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015538	Polrmt	99	73.752	ENSSBOG00000025388	POLRMT	94	73.752	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015538	Polrmt	100	59.080	ENSSHAG00000009387	-	100	58.477	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.201	ENSSFOG00015005074	polrmt	96	63.074	Scleropages_formosus
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.385	ENSSMAG00000011851	polrmt	93	63.349	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.663	ENSSDUG00000004410	polrmt	93	61.587	Seriola_dumerili
MGP_CAROLIEiJ_G0015538	Polrmt	100	61.663	ENSSLDG00000010643	polrmt	93	61.746	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015538	Polrmt	70	58.484	ENSSPUG00000009181	-	100	58.885	Sphenodon_punctatus
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.356	ENSSPAG00000018740	polrmt	75	63.942	Stegastes_partitus
MGP_CAROLIEiJ_G0015538	Polrmt	100	76.677	ENSSSCG00000035693	POLRMT	94	76.677	Sus_scrofa
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.442	ENSTGUG00000000621	POLRMT	100	63.344	Taeniopygia_guttata
MGP_CAROLIEiJ_G0015538	Polrmt	100	60.046	ENSTRUG00000018040	polrmt	91	64.372	Takifugu_rubripes
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.014	ENSTNIG00000010642	polrmt	93	62.780	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0015538	Polrmt	67	67.496	ENSTBEG00000001819	-	89	81.765	Tupaia_belangeri
MGP_CAROLIEiJ_G0015538	Polrmt	75	72.997	ENSTTRG00000011329	POLRMT	65	78.353	Tursiops_truncatus
MGP_CAROLIEiJ_G0015538	Polrmt	100	79.454	ENSUAMG00000019616	POLRMT	93	81.785	Ursus_americanus
MGP_CAROLIEiJ_G0015538	Polrmt	97	73.548	ENSVVUG00000022627	POLRMT	93	73.548	Vulpes_vulpes
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.903	ENSXETG00000006545	polrmt	92	65.120	Xenopus_tropicalis
MGP_CAROLIEiJ_G0015538	Polrmt	100	62.125	ENSXMAG00000012464	polrmt	92	63.016	Xiphophorus_maculatus