EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015582 (Gene tree)
Gene ID: 110303305
Gene Symbol: Mex3d
Alias: Rkhd1
Full Name: mex-3 RNA binding family member D
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 7525 bases
Position: chr10:74367751-74375275
Accession: 110303305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0023939	KH_1	PF00013.29	3.6e-25	1	2
MGP_CAROLIEiJ_P0023939	KH_1	PF00013.29	3.6e-25	2	2
MGP_CAROLIEiJ_P0023940	KH_1	PF00013.29	5.6e-25	1	2
MGP_CAROLIEiJ_P0023940	KH_1	PF00013.29	5.6e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0023939	-	3262	XM_021174384	MGP_CAROLIEiJ_P0023939	611 (aa)	XP_021030043	-
MGP_CAROLIEiJ_T0023940	-	3252	-	MGP_CAROLIEiJ_P0023940	718 (aa)	-	UPI000A317418
MGP_CAROLIEiJ_T0023941	-	1354	-	MGP_CAROLIEiJ_P0023941	267 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0015582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0015582	Mex3d	80	52.033	MGP_CAROLIEiJ_G0022391	Mex3c	68	51.881

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015582	Mex3d	89	79.204	ENSG00000181588	MEX3D	97	80.164	Homo_sapiens
MGP_CAROLIEiJ_G0015582	Mex3d	88	51.351	ENSAPOG00000000124	MEX3D	99	51.327	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0015582	Mex3d	73	80.095	ENSACIG00000017738	-	84	52.212	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0015582	Mex3d	82	53.757	ENSAOCG00000015529	MEX3D	96	53.992	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0015582	Mex3d	82	53.757	ENSAPEG00000012520	MEX3D	96	53.992	Amphiprion_percula
MGP_CAROLIEiJ_G0015582	Mex3d	85	49.912	ENSATEG00000015620	MEX3D	96	50.261	Anabas_testudineus
MGP_CAROLIEiJ_G0015582	Mex3d	83	77.712	ENSANAG00000035413	-	86	77.120	Aotus_nancymaae
MGP_CAROLIEiJ_G0015582	Mex3d	87	51.264	ENSACLG00000002826	MEX3D	93	51.439	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015582	Mex3d	70	75.556	ENSAMXG00000042500	MEX3D	95	54.581	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015582	Mex3d	89	77.379	ENSBTAG00000040334	MEX3D	82	79.676	Bos_taurus
MGP_CAROLIEiJ_G0015582	Mex3d	87	80.741	ENSCJAG00000045432	MEX3D	83	80.431	Callithrix_jacchus
MGP_CAROLIEiJ_G0015582	Mex3d	77	79.399	ENSCAFG00000023712	MEX3D	100	79.828	Canis_familiaris
MGP_CAROLIEiJ_G0015582	Mex3d	85	80.077	ENSCAFG00020017245	MEX3D	84	77.396	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015582	Mex3d	88	77.677	ENSCHIG00000012929	MEX3D	82	80.036	Capra_hircus
MGP_CAROLIEiJ_G0015582	Mex3d	88	80.952	ENSCCAG00000028942	MEX3D	99	81.081	Cebus_capucinus
MGP_CAROLIEiJ_G0015582	Mex3d	89	80.978	ENSCATG00000029350	MEX3D	87	80.978	Cercocebus_atys
MGP_CAROLIEiJ_G0015582	Mex3d	89	81.307	ENSCSAG00000011984	MEX3D	89	80.581	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015582	Mex3d	88	63.100	ENSCPBG00000018438	MEX3D	82	64.954	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015582	Mex3d	100	95.572	ENSCGRG00001023775	Mex3d	100	95.396	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015582	Mex3d	98	95.326	ENSCGRG00000018060	Mex3d	100	95.326	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015582	Mex3d	82	48.748	ENSCSEG00000014157	MEX3D	95	52.408	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0015582	Mex3d	72	67.925	ENSCVAG00000021251	MEX3D	89	50.083	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015582	Mex3d	60	74.474	ENSDNOG00000041317	-	96	75.526	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015582	Mex3d	88	80.762	ENSEASG00005021741	MEX3D	82	82.033	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015582	Mex3d	88	81.056	ENSECAG00000030546	MEX3D	59	82.332	Equus_caballus
MGP_CAROLIEiJ_G0015582	Mex3d	65	53.623	ENSELUG00000008214	MEX3D	97	52.552	Esox_lucius
MGP_CAROLIEiJ_G0015582	Mex3d	85	80.577	ENSFCAG00000043755	MEX3D	98	80.182	Felis_catus
MGP_CAROLIEiJ_G0015582	Mex3d	56	95.000	ENSFDAG00000009670	-	100	93.478	Fukomys_damarensis
MGP_CAROLIEiJ_G0015582	Mex3d	82	66.469	ENSGALG00000052296	MEX3D	90	65.149	Gallus_gallus
MGP_CAROLIEiJ_G0015582	Mex3d	90	50.704	ENSGAFG00000008425	MEX3D	91	69.057	Gambusia_affinis
MGP_CAROLIEiJ_G0015582	Mex3d	80	51.838	ENSGACG00000015299	MEX3D	94	52.441	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0015582	Mex3d	88	63.100	ENSGAGG00000001233	MEX3D	80	64.037	Gopherus_agassizii
MGP_CAROLIEiJ_G0015582	Mex3d	85	78.462	ENSGGOG00000001083	-	100	78.077	Gorilla_gorilla
MGP_CAROLIEiJ_G0015582	Mex3d	87	52.277	ENSHBUG00000021600	MEX3D	93	52.622	Haplochromis_burtoni
MGP_CAROLIEiJ_G0015582	Mex3d	87	79.558	ENSHGLG00000015152	MEX3D	92	79.596	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015582	Mex3d	85	52.285	ENSHCOG00000001289	MEX3D	83	52.450	Hippocampus_comes
MGP_CAROLIEiJ_G0015582	Mex3d	72	72.222	ENSIPUG00000019444	MEX3D	89	53.861	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015582	Mex3d	86	85.255	ENSSTOG00000025299	MEX3D	100	84.499	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015582	Mex3d	92	84.629	ENSJJAG00000024350	Mex3d	97	84.629	Jaculus_jaculus
MGP_CAROLIEiJ_G0015582	Mex3d	82	53.242	ENSKMAG00000006645	MEX3D	98	52.190	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0015582	Mex3d	87	50.089	ENSLBEG00000000974	MEX3D	84	51.865	Labrus_bergylta
MGP_CAROLIEiJ_G0015582	Mex3d	85	59.962	ENSLACG00000016407	MEX3D	81	59.300	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015582	Mex3d	87	79.182	ENSMFAG00000043798	MEX3D	100	78.439	Macaca_fascicularis
MGP_CAROLIEiJ_G0015582	Mex3d	87	82.189	ENSMMUG00000043577	MEX3D	96	78.033	Macaca_mulatta
MGP_CAROLIEiJ_G0015582	Mex3d	89	70.109	ENSMNEG00000043766	MEX3D	87	70.109	Macaca_nemestrina
MGP_CAROLIEiJ_G0015582	Mex3d	90	48.495	ENSMAMG00000009575	MEX3D	88	49.111	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015582	Mex3d	87	49.574	ENSMZEG00005025626	MEX3D	86	50.772	Maylandia_zebra
MGP_CAROLIEiJ_G0015582	Mex3d	77	65.106	ENSMGAG00000002325	MEX3D	100	64.544	Meleagris_gallopavo
MGP_CAROLIEiJ_G0015582	Mex3d	100	91.840	ENSMAUG00000014977	Mex3d	100	91.654	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015582	Mex3d	85	83.430	ENSMICG00000036648	MEX3D	83	81.555	Microcebus_murinus
MGP_CAROLIEiJ_G0015582	Mex3d	100	92.528	ENSMOCG00000010308	Mex3d	100	92.528	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015582	Mex3d	87	65.250	ENSMODG00000004116	MEX3D	97	67.336	Monodelphis_domestica
MGP_CAROLIEiJ_G0015582	Mex3d	82	49.414	ENSMALG00000020525	MEX3D	95	53.010	Monopterus_albus
MGP_CAROLIEiJ_G0015582	Mex3d	100	99.509	ENSMUSG00000048696	Mex3d	100	99.443	Mus_musculus
MGP_CAROLIEiJ_G0015582	Mex3d	100	99.304	MGP_SPRETEiJ_G0016400	Mex3d	100	99.304	Mus_spretus
MGP_CAROLIEiJ_G0015582	Mex3d	76	75.803	ENSMLUG00000017018	MEX3D	96	75.161	Myotis_lucifugus
MGP_CAROLIEiJ_G0015582	Mex3d	100	84.176	ENSNGAG00000021771	Mex3d	100	84.176	Nannospalax_galili
MGP_CAROLIEiJ_G0015582	Mex3d	75	71.111	ENSNBRG00000020089	MEX3D	92	51.718	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0015582	Mex3d	64	84.000	ENSNLEG00000001719	-	99	83.243	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015582	Mex3d	78	66.667	ENSMEUG00000016404	-	100	66.940	Notamacropus_eugenii
MGP_CAROLIEiJ_G0015582	Mex3d	67	79.703	ENSOPRG00000008708	-	94	81.282	Ochotona_princeps
MGP_CAROLIEiJ_G0015582	Mex3d	85	79.507	ENSODEG00000012631	MEX3D	94	78.125	Octodon_degus
MGP_CAROLIEiJ_G0015582	Mex3d	56	72.254	ENSOANG00000011764	-	95	70.492	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0015582	Mex3d	85	51.941	ENSORLG00000015223	MEX3D	85	53.180	Oryzias_latipes
MGP_CAROLIEiJ_G0015582	Mex3d	85	52.336	ENSORLG00020017489	MEX3D	85	53.345	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0015582	Mex3d	88	51.920	ENSORLG00015017429	MEX3D	89	53.786	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015582	Mex3d	73	68.421	ENSOMEG00000020682	MEX3D	99	51.832	Oryzias_melastigma
MGP_CAROLIEiJ_G0015582	Mex3d	84	82.979	ENSOGAG00000032843	MEX3D	100	81.868	Otolemur_garnettii
MGP_CAROLIEiJ_G0015582	Mex3d	53	96.296	ENSPPRG00000024256	MEX3D	80	91.216	Panthera_pardus
MGP_CAROLIEiJ_G0015582	Mex3d	90	80.108	ENSPTRG00000010208	MEX3D	92	80.108	Pan_troglodytes
MGP_CAROLIEiJ_G0015582	Mex3d	88	77.407	ENSPANG00000025407	MEX3D	82	76.111	Papio_anubis
MGP_CAROLIEiJ_G0015582	Mex3d	81	52.756	ENSPKIG00000011176	-	90	52.601	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015582	Mex3d	82	51.068	ENSPKIG00000018608	MEX3D	91	53.612	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015582	Mex3d	87	50.000	ENSPMGG00000017213	-	87	49.355	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0015582	Mex3d	87	66.359	ENSPCIG00000000826	MEX3D	76	66.011	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015582	Mex3d	85	52.000	ENSPFOG00000013402	MEX3D	97	52.773	Poecilia_formosa
MGP_CAROLIEiJ_G0015582	Mex3d	85	50.573	ENSPLAG00000018945	MEX3D	96	50.471	Poecilia_latipinna
MGP_CAROLIEiJ_G0015582	Mex3d	85	50.478	ENSPMEG00000009307	MEX3D	93	50.189	Poecilia_mexicana
MGP_CAROLIEiJ_G0015582	Mex3d	74	67.925	ENSPREG00000017736	MEX3D	93	52.908	Poecilia_reticulata
MGP_CAROLIEiJ_G0015582	Mex3d	81	80.885	ENSPPYG00000009324	-	97	80.483	Pongo_abelii
MGP_CAROLIEiJ_G0015582	Mex3d	58	80.682	ENSPCAG00000010972	-	100	82.102	Procavia_capensis
MGP_CAROLIEiJ_G0015582	Mex3d	91	81.786	ENSPCOG00000021111	MEX3D	93	81.250	Propithecus_coquereli
MGP_CAROLIEiJ_G0015582	Mex3d	87	52.641	ENSPNYG00000006622	-	93	52.441	Pundamilia_nyererei
MGP_CAROLIEiJ_G0015582	Mex3d	86	50.622	ENSPNAG00000027243	MEX3D	95	53.585	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0015582	Mex3d	99	97.213	ENSRNOG00000030830	Mex3d	98	97.059	Rattus_norvegicus
MGP_CAROLIEiJ_G0015582	Mex3d	53	87.346	ENSRBIG00000035383	-	99	88.272	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015582	Mex3d	83	52.174	ENSSFOG00015003876	mex3d	86	52.043	Scleropages_formosus
MGP_CAROLIEiJ_G0015582	Mex3d	63	58.333	ENSSMAG00000003087	MEX3D	87	51.658	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015582	Mex3d	80	49.405	ENSSDUG00000015559	MEX3D	81	50.803	Seriola_dumerili
MGP_CAROLIEiJ_G0015582	Mex3d	87	49.060	ENSSLDG00000010251	MEX3D	85	50.426	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015582	Mex3d	90	60.326	ENSSPUG00000015849	MEX3D	83	61.854	Sphenodon_punctatus
MGP_CAROLIEiJ_G0015582	Mex3d	90	50.853	ENSSPAG00000005264	MEX3D	95	50.508	Stegastes_partitus
MGP_CAROLIEiJ_G0015582	Mex3d	89	80.909	ENSSSCG00000021750	MEX3D	83	82.000	Sus_scrofa
MGP_CAROLIEiJ_G0015582	Mex3d	80	64.008	ENSTGUG00000000201	MEX3D	99	64.358	Taeniopygia_guttata
MGP_CAROLIEiJ_G0015582	Mex3d	74	66.038	ENSTRUG00000007986	MEX3D	95	52.206	Takifugu_rubripes
MGP_CAROLIEiJ_G0015582	Mex3d	82	50.851	ENSTNIG00000015325	MEX3D	94	53.686	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0015582	Mex3d	81	81.212	ENSTTRG00000008132	MEX3D	97	80.684	Tursiops_truncatus
MGP_CAROLIEiJ_G0015582	Mex3d	62	71.111	ENSXCOG00000008198	MEX3D	90	71.111	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0015582	Mex3d	85	52.091	ENSXMAG00000025266	MEX3D	96	52.820	Xiphophorus_maculatus