EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015602 (Gene tree)
Gene ID: 110303668
Gene Symbol: -
Alias: -
Full Name: splicing factor 3a subunit 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 6286 bases
Position: chr10:74799292-74805577
Accession: 110303668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0024008	zf-met	PF12874.7	8.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0024007	-	1543	-	MGP_CAROLIEiJ_P0024007	485 (aa)	XP_021030501	UPI000002186E
MGP_CAROLIEiJ_T0024008	-	781	-	MGP_CAROLIEiJ_P0024008	194 (aa)	-	-
MGP_CAROLIEiJ_T0024009	-	374	-	MGP_CAROLIEiJ_P0024009	67 (aa)	-	UPI0001889DC8
MGP_CAROLIEiJ_T0024010	-	731	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0015602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015602's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSG00000104897	SF3A2	100	99.259	Homo_sapiens
MGP_CAROLIEiJ_G0015602	-	94	95.604	ENSAPOG00000003916	sf3a2	73	95.370	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0015602	-	94	100.000	ENSAMEG00000005469	SF3A2	52	100.000	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSACIG00000018153	sf3a2	73	95.370	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0015602	-	94	95.604	ENSAOCG00000015960	sf3a2	73	95.370	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0015602	-	94	95.604	ENSAPEG00000012336	sf3a2	73	95.370	Amphiprion_percula
MGP_CAROLIEiJ_G0015602	-	94	95.604	ENSATEG00000015449	sf3a2	76	93.333	Anabas_testudineus
MGP_CAROLIEiJ_G0015602	-	99	95.855	ENSANAG00000034031	-	92	95.855	Aotus_nancymaae
MGP_CAROLIEiJ_G0015602	-	94	96.703	ENSACLG00000002356	sf3a2	77	93.778	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015602	-	94	96.703	ENSAMXG00000032428	sf3a2	74	94.144	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015602	-	94	100.000	ENSBTAG00000025452	SF3A2	50	100.000	Bos_taurus
MGP_CAROLIEiJ_G0015602	-	94	80.769	WBGene00008683	repo-1	99	77.376	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSCJAG00000013206	-	52	99.582	Callithrix_jacchus
MGP_CAROLIEiJ_G0015602	-	94	100.000	ENSCAFG00000019414	SF3A2	94	80.467	Canis_familiaris
MGP_CAROLIEiJ_G0015602	-	94	100.000	ENSCAFG00020018153	SF3A2	50	100.000	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015602	-	94	100.000	ENSCHIG00000018323	SF3A2	50	100.000	Capra_hircus
MGP_CAROLIEiJ_G0015602	-	100	95.876	ENSCAPG00000003402	-	95	95.876	Cavia_aperea
MGP_CAROLIEiJ_G0015602	-	94	100.000	ENSCPOG00000032868	SF3A2	53	100.000	Cavia_porcellus
MGP_CAROLIEiJ_G0015602	-	99	96.373	ENSCCAG00000009812	SF3A2	91	96.373	Cebus_capucinus
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSCATG00000038453	SF3A2	52	99.582	Cercocebus_atys
MGP_CAROLIEiJ_G0015602	-	94	100.000	ENSCLAG00000008987	SF3A2	100	90.535	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSCSAG00000011717	SF3A2	51	99.582	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015602	-	94	98.901	ENSCPBG00000018569	SF3A2	72	97.788	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015602	-	94	86.264	ENSCING00000003319	zf(matrin)-2	63	84.091	Ciona_intestinalis
MGP_CAROLIEiJ_G0015602	-	94	84.615	ENSCSAVG00000007862	-	59	83.636	Ciona_savignyi
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSCANG00000024451	SF3A2	52	99.582	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015602	-	100	97.732	ENSCGRG00001001802	Sf3a2	100	97.732	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015602	-	100	98.454	ENSCGRG00000011089	Sf3a2	100	98.454	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSCSEG00000014308	sf3a2	79	93.304	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0015602	-	94	96.703	ENSCVAG00000021349	sf3a2	73	95.833	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSDARG00000021107	sf3a2	81	93.750	Danio_rerio
MGP_CAROLIEiJ_G0015602	-	94	100.000	ENSDORG00000014445	Sf3a2	52	99.582	Dipodomys_ordii
MGP_CAROLIEiJ_G0015602	-	94	85.246	FBgn0036314	Sf3a2	86	82.379	Drosophila_melanogaster
MGP_CAROLIEiJ_G0015602	-	70	100.000	ENSETEG00000016949	-	58	100.000	Echinops_telfairi
MGP_CAROLIEiJ_G0015602	-	94	100.000	ENSEASG00005021972	SF3A2	52	100.000	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015602	-	94	97.253	ENSELUG00000008471	sf3a2	74	94.222	Esox_lucius
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSFCAG00000030476	SF3A2	55	99.582	Felis_catus
MGP_CAROLIEiJ_G0015602	-	79	98.039	ENSFALG00000013785	-	100	70.757	Ficedula_albicollis
MGP_CAROLIEiJ_G0015602	-	100	95.876	ENSFDAG00000020911	-	99	95.876	Fukomys_damarensis
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSFHEG00000002392	sf3a2	74	95.370	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSGMOG00000012186	sf3a2	72	95.370	Gadus_morhua
MGP_CAROLIEiJ_G0015602	-	94	97.802	ENSGALG00000021679	SF3A2	72	97.345	Gallus_gallus
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSGAFG00000008478	sf3a2	73	95.370	Gambusia_affinis
MGP_CAROLIEiJ_G0015602	-	94	96.703	ENSGACG00000015255	sf3a2	74	96.296	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0015602	-	70	98.529	ENSGAGG00000008500	SF3A2	67	97.222	Gopherus_agassizii
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSGGOG00000006613	SF3A2	52	99.582	Gorilla_gorilla
MGP_CAROLIEiJ_G0015602	-	94	96.703	ENSHBUG00000021796	sf3a2	77	93.778	Haplochromis_burtoni
MGP_CAROLIEiJ_G0015602	-	94	100.000	ENSHGLG00000015102	SF3A2	88	100.000	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015602	-	94	100.000	ENSHGLG00100000418	SF3A2	88	100.000	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSHCOG00000001223	sf3a2	77	93.750	Hippocampus_comes
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSIPUG00000019071	sf3a2	72	95.370	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015602	-	100	94.444	ENSSTOG00000007495	SF3A2	100	94.650	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015602	-	100	96.907	ENSJJAG00000010635	Sf3a2	100	96.907	Jaculus_jaculus
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSKMAG00000006295	sf3a2	73	95.370	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0015602	-	94	96.703	ENSLBEG00000000677	sf3a2	76	93.778	Labrus_bergylta
MGP_CAROLIEiJ_G0015602	-	94	96.703	ENSLACG00000008744	SF3A2	72	95.575	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015602	-	94	97.253	ENSLOCG00000005835	sf3a2	70	96.296	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSMFAG00000002638	SF3A2	52	99.582	Macaca_fascicularis
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSMMUG00000010111	SF3A2	52	99.582	Macaca_mulatta
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSMNEG00000036916	SF3A2	51	99.582	Macaca_nemestrina
MGP_CAROLIEiJ_G0015602	-	94	95.604	ENSMAMG00000009881	sf3a2	76	93.304	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015602	-	94	96.703	ENSMZEG00005025609	sf3a2	77	93.778	Maylandia_zebra
MGP_CAROLIEiJ_G0015602	-	94	97.802	ENSMGAG00000001950	SF3A2	72	97.345	Meleagris_gallopavo
MGP_CAROLIEiJ_G0015602	-	100	98.454	ENSMAUG00000005644	-	100	98.454	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSMICG00000015443	SF3A2	52	99.582	Microcebus_murinus
MGP_CAROLIEiJ_G0015602	-	100	95.464	ENSMOCG00000007216	Sf3a2	100	95.670	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015602	-	94	84.699	ENSMMOG00000010657	sf3a2	85	81.250	Mola_mola
MGP_CAROLIEiJ_G0015602	-	94	95.604	ENSMALG00000020442	sf3a2	77	91.667	Monopterus_albus
MGP_CAROLIEiJ_G0015602	-	100	100.000	ENSMUSG00000020211	Sf3a2	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0015602	-	100	99.485	MGP_PahariEiJ_G0031015	-	100	99.485	Mus_pahari
MGP_CAROLIEiJ_G0015602	-	100	99.794	MGP_SPRETEiJ_G0016420	-	100	99.794	Mus_spretus
MGP_CAROLIEiJ_G0015602	-	94	98.901	ENSMPUG00000006956	SF3A2	52	99.163	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSMLUG00000004426	-	54	99.582	Myotis_lucifugus
MGP_CAROLIEiJ_G0015602	-	100	96.392	ENSNGAG00000023309	-	100	96.392	Nannospalax_galili
MGP_CAROLIEiJ_G0015602	-	94	96.703	ENSNBRG00000019872	sf3a2	77	93.778	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0015602	-	94	100.000	ENSODEG00000013722	-	100	97.861	Octodon_degus
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSONIG00000010198	sf3a2	77	93.333	Oreochromis_niloticus
MGP_CAROLIEiJ_G0015602	-	94	98.901	ENSOANG00000013649	-	98	99.024	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0015602	-	94	95.055	ENSORLG00000015301	sf3a2	74	94.444	Oryzias_latipes
MGP_CAROLIEiJ_G0015602	-	94	95.055	ENSORLG00020017235	sf3a2	74	94.444	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0015602	-	94	95.055	ENSORLG00015017116	sf3a2	74	94.444	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015602	-	94	95.055	ENSOMEG00000020860	sf3a2	63	95.055	Oryzias_melastigma
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSOGAG00000033389	SF3A2	52	99.582	Otolemur_garnettii
MGP_CAROLIEiJ_G0015602	-	94	100.000	ENSOARG00000014357	SF3A2	86	100.000	Ovis_aries
MGP_CAROLIEiJ_G0015602	-	100	75.829	ENSPPAG00000037864	-	50	84.937	Pan_paniscus
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSPPRG00000007798	SF3A2	51	99.582	Panthera_pardus
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSPTRG00000010227	SF3A2	93	64.410	Pan_troglodytes
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSPANG00000007949	SF3A2	52	99.582	Papio_anubis
MGP_CAROLIEiJ_G0015602	-	94	96.703	ENSPKIG00000009487	sf3a2	71	94.222	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015602	-	94	98.901	ENSPSIG00000010839	SF3A2	72	96.491	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015602	-	94	95.604	ENSPMGG00000017249	sf3a2	91	84.746	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0015602	-	94	100.000	ENSPEMG00000021288	Sf3a2	100	94.639	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSPFOG00000015945	sf3a2	73	95.370	Poecilia_formosa
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSPLAG00000010052	sf3a2	73	95.370	Poecilia_latipinna
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSPMEG00000000184	sf3a2	73	95.370	Poecilia_mexicana
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSPREG00000017808	sf3a2	73	95.370	Poecilia_reticulata
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSPPYG00000009342	SF3A2	52	99.582	Pongo_abelii
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSPCOG00000020295	SF3A2	53	99.582	Propithecus_coquereli
MGP_CAROLIEiJ_G0015602	-	94	96.703	ENSPNYG00000006928	sf3a2	77	93.778	Pundamilia_nyererei
MGP_CAROLIEiJ_G0015602	-	94	96.703	ENSPNAG00000027582	sf3a2	72	95.833	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0015602	-	100	96.495	ENSRNOG00000019349	Sf3a2	100	96.495	Rattus_norvegicus
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSRBIG00000026709	SF3A2	62	99.582	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSRROG00000034440	SF3A2	51	99.582	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015602	-	86	98.795	ENSSBOG00000026071	SF3A2	93	79.694	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015602	-	94	99.451	ENSSHAG00000011677	-	100	98.785	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015602	-	81	85.443	ENSSHAG00000011646	-	77	88.837	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015602	-	94	96.703	ENSSFOG00015010920	sf3a2	64	92.920	Scleropages_formosus
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSSMAG00000002629	sf3a2	75	95.833	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSSDUG00000015810	sf3a2	77	93.333	Seriola_dumerili
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSSLDG00000010874	sf3a2	78	92.544	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015602	-	94	95.604	ENSSPAG00000004960	sf3a2	77	92.105	Stegastes_partitus
MGP_CAROLIEiJ_G0015602	-	94	98.901	ENSSSCG00000039757	SF3A2	52	99.163	Sus_scrofa
MGP_CAROLIEiJ_G0015602	-	94	97.802	ENSTGUG00000000305	SF3A2	100	98.049	Taeniopygia_guttata
MGP_CAROLIEiJ_G0015602	-	94	95.604	ENSTRUG00000009045	sf3a2	75	95.370	Takifugu_rubripes
MGP_CAROLIEiJ_G0015602	-	94	95.055	ENSTNIG00000015318	sf3a2	75	94.907	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0015602	-	94	79.670	ENSTTRG00000010177	-	52	84.519	Tursiops_truncatus
MGP_CAROLIEiJ_G0015602	-	94	100.000	ENSVVUG00000002578	SF3A2	50	100.000	Vulpes_vulpes
MGP_CAROLIEiJ_G0015602	-	94	97.802	ENSXETG00000024943	sf3a2	54	96.429	Xenopus_tropicalis
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSXCOG00000008222	sf3a2	74	95.370	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0015602	-	94	96.154	ENSXMAG00000029068	sf3a2	74	95.370	Xiphophorus_maculatus