EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015629 (Gene tree)
Gene ID: 110303789
Gene Symbol: Mrpl54
Alias: 0610008M19Rik|D10Sut1e
Full Name: mitochondrial ribosomal protein L54
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 2229 bases
Position: chr10:75265256-75267484
Accession: 110303789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0024100	Ribosomal_L37	PF08561.10	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0024101	-	529	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0024100	-	608	XM_021175002	MGP_CAROLIEiJ_P0024100	135 (aa)	XP_021030661	UPI000A3168B5

Gene Model

Click here to download MGP_CAROLIEiJ_G0015629's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015629's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015629	Mrpl54	100	68.841	ENSG00000183617	MRPL54	100	66.667	Homo_sapiens
MGP_CAROLIEiJ_G0015629	Mrpl54	75	61.386	ENSAPOG00000022643	mrpl54	73	61.386	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	70.290	ENSAMEG00000005908	MRPL54	100	68.841	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015629	Mrpl54	65	65.909	ENSACIG00000006438	mrpl54	73	64.356	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0015629	Mrpl54	63	62.353	ENSAOCG00000006430	mrpl54	73	60.396	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0015629	Mrpl54	63	62.353	ENSAPEG00000023406	mrpl54	73	60.396	Amphiprion_percula
MGP_CAROLIEiJ_G0015629	Mrpl54	63	58.824	ENSATEG00000004969	mrpl54	62	58.824	Anabas_testudineus
MGP_CAROLIEiJ_G0015629	Mrpl54	78	60.952	ENSACAG00000017747	-	98	60.952	Anolis_carolinensis
MGP_CAROLIEiJ_G0015629	Mrpl54	100	69.565	ENSANAG00000028692	MRPL54	100	68.841	Aotus_nancymaae
MGP_CAROLIEiJ_G0015629	Mrpl54	65	64.773	ENSACLG00000001877	mrpl54	73	63.366	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015629	Mrpl54	61	63.415	ENSAMXG00000018143	mrpl54	85	53.333	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	69.565	ENSBTAG00000008396	MRPL54	100	70.290	Bos_taurus
MGP_CAROLIEiJ_G0015629	Mrpl54	56	40.000	WBGene00009128	mrpl-54	59	40.000	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0015629	Mrpl54	100	70.290	ENSCJAG00000014998	MRPL54	100	69.565	Callithrix_jacchus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	69.565	ENSCAFG00000019192	MRPL54	100	68.116	Canis_familiaris
MGP_CAROLIEiJ_G0015629	Mrpl54	100	69.565	ENSCAFG00020018333	MRPL54	100	68.116	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015629	Mrpl54	100	71.014	ENSCHIG00000026538	MRPL54	100	71.014	Capra_hircus
MGP_CAROLIEiJ_G0015629	Mrpl54	70	78.947	ENSCAPG00000012166	MRPL54	93	79.545	Cavia_aperea
MGP_CAROLIEiJ_G0015629	Mrpl54	100	65.942	ENSCPOG00000031082	MRPL54	100	64.493	Cavia_porcellus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	68.841	ENSCCAG00000000138	MRPL54	100	68.116	Cebus_capucinus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	69.565	ENSCATG00000014066	MRPL54	100	70.290	Cercocebus_atys
MGP_CAROLIEiJ_G0015629	Mrpl54	100	68.889	ENSCLAG00000007908	MRPL54	100	68.889	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015629	Mrpl54	100	70.290	ENSCSAG00000010950	MRPL54	100	71.014	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015629	Mrpl54	96	55.797	ENSCPBG00000017103	MRPL54	78	55.797	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015629	Mrpl54	70	37.500	ENSCING00000019896	-	54	37.662	Ciona_intestinalis
MGP_CAROLIEiJ_G0015629	Mrpl54	78	34.286	ENSCSAVG00000009604	-	58	36.905	Ciona_savignyi
MGP_CAROLIEiJ_G0015629	Mrpl54	100	71.739	ENSCANG00000027841	MRPL54	100	70.290	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	79.710	ENSCGRG00001019482	Mrpl54	100	78.261	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015629	Mrpl54	100	79.710	ENSCGRG00000010923	Mrpl54	100	78.261	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015629	Mrpl54	79	61.321	ENSCSEG00000019883	mrpl54	71	61.321	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0015629	Mrpl54	77	61.538	ENSCVAG00000002210	mrpl54	74	61.538	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015629	Mrpl54	76	61.165	ENSDARG00000071468	mrpl54	76	61.165	Danio_rerio
MGP_CAROLIEiJ_G0015629	Mrpl54	99	67.407	ENSDNOG00000007387	MRPL54	100	66.423	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	70.370	ENSDORG00000005326	Mrpl54	100	68.148	Dipodomys_ordii
MGP_CAROLIEiJ_G0015629	Mrpl54	58	46.154	FBgn0034579	mRpL54	59	46.154	Drosophila_melanogaster
MGP_CAROLIEiJ_G0015629	Mrpl54	96	68.421	ENSETEG00000017500	MRPL54	99	66.165	Echinops_telfairi
MGP_CAROLIEiJ_G0015629	Mrpl54	64	54.023	ENSEBUG00000003179	mrpl54	75	54.023	Eptatretus_burgeri
MGP_CAROLIEiJ_G0015629	Mrpl54	100	69.343	ENSEASG00005022283	MRPL54	100	69.343	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	69.343	ENSECAG00000001515	MRPL54	100	69.343	Equus_caballus
MGP_CAROLIEiJ_G0015629	Mrpl54	75	61.386	ENSELUG00000022358	mrpl54	73	61.386	Esox_lucius
MGP_CAROLIEiJ_G0015629	Mrpl54	100	72.464	ENSFCAG00000007144	MRPL54	100	71.014	Felis_catus
MGP_CAROLIEiJ_G0015629	Mrpl54	74	65.347	ENSFALG00000011660	MRPL54	79	71.765	Ficedula_albicollis
MGP_CAROLIEiJ_G0015629	Mrpl54	100	65.957	ENSFDAG00000020803	MRPL54	100	64.539	Fukomys_damarensis
MGP_CAROLIEiJ_G0015629	Mrpl54	81	58.182	ENSGALG00000027611	MRPL54	89	58.182	Gallus_gallus
MGP_CAROLIEiJ_G0015629	Mrpl54	65	56.818	ENSGAFG00000016193	mrpl54	73	57.426	Gambusia_affinis
MGP_CAROLIEiJ_G0015629	Mrpl54	66	67.416	ENSGAGG00000020238	MRPL54	69	67.045	Gopherus_agassizii
MGP_CAROLIEiJ_G0015629	Mrpl54	100	69.565	ENSGGOG00000014722	MRPL54	100	67.391	Gorilla_gorilla
MGP_CAROLIEiJ_G0015629	Mrpl54	65	64.773	ENSHBUG00000009028	mrpl54	60	63.366	Haplochromis_burtoni
MGP_CAROLIEiJ_G0015629	Mrpl54	100	69.630	ENSHGLG00000006157	MRPL54	100	66.667	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015629	Mrpl54	100	69.630	ENSHGLG00100000788	MRPL54	100	66.667	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015629	Mrpl54	65	60.227	ENSHCOG00000000536	mrpl54	71	59.406	Hippocampus_comes
MGP_CAROLIEiJ_G0015629	Mrpl54	65	61.364	ENSIPUG00000024854	mrpl54	75	60.577	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015629	Mrpl54	70	82.105	ENSSTOG00000022378	MRPL54	90	82.955	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	73.913	ENSJJAG00000020405	Mrpl54	100	72.464	Jaculus_jaculus
MGP_CAROLIEiJ_G0015629	Mrpl54	74	59.406	ENSKMAG00000022310	mrpl54	63	61.364	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0015629	Mrpl54	75	61.386	ENSLBEG00000005935	mrpl54	76	60.577	Labrus_bergylta
MGP_CAROLIEiJ_G0015629	Mrpl54	81	60.000	ENSLACG00000013912	MRPL54	75	64.356	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015629	Mrpl54	65	67.045	ENSLOCG00000003860	mrpl54	73	66.337	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	69.784	ENSLAFG00000029657	MRPL54	100	68.345	Loxodonta_africana
MGP_CAROLIEiJ_G0015629	Mrpl54	100	70.290	ENSMFAG00000003311	MRPL54	100	71.014	Macaca_fascicularis
MGP_CAROLIEiJ_G0015629	Mrpl54	100	70.290	ENSMMUG00000044080	MRPL54	100	71.014	Macaca_mulatta
MGP_CAROLIEiJ_G0015629	Mrpl54	100	70.290	ENSMNEG00000039499	MRPL54	100	71.014	Macaca_nemestrina
MGP_CAROLIEiJ_G0015629	Mrpl54	75	59.406	ENSMAMG00000003291	mrpl54	77	59.406	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015629	Mrpl54	65	64.773	ENSMZEG00005009023	mrpl54	60	63.366	Maylandia_zebra
MGP_CAROLIEiJ_G0015629	Mrpl54	63	63.529	ENSMGAG00000000951	MRPL54	88	63.529	Meleagris_gallopavo
MGP_CAROLIEiJ_G0015629	Mrpl54	100	82.963	ENSMAUG00000009543	Mrpl54	100	82.963	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	72.464	ENSMICG00000034581	MRPL54	87	71.739	Microcebus_murinus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	82.609	ENSMOCG00000017895	Mrpl54	100	81.159	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015629	Mrpl54	70	58.511	ENSMMOG00000020370	mrpl54	73	58.416	Mola_mola
MGP_CAROLIEiJ_G0015629	Mrpl54	100	66.176	ENSMODG00000000602	MRPL54	100	61.765	Monodelphis_domestica
MGP_CAROLIEiJ_G0015629	Mrpl54	65	62.500	ENSMALG00000020280	mrpl54	73	61.386	Monopterus_albus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	97.037	ENSMUSG00000034932	Mrpl54	100	97.037	Mus_musculus
MGP_CAROLIEiJ_G0015629	Mrpl54	99	94.030	MGP_PahariEiJ_G0031042	Mrpl54	99	94.030	Mus_pahari
MGP_CAROLIEiJ_G0015629	Mrpl54	100	98.519	MGP_SPRETEiJ_G0016447	Mrpl54	100	98.519	Mus_spretus
MGP_CAROLIEiJ_G0015629	Mrpl54	64	81.395	ENSMLUG00000010801	MRPL54	83	79.545	Myotis_lucifugus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	72.662	ENSNGAG00000021044	Mrpl54	100	71.223	Nannospalax_galili
MGP_CAROLIEiJ_G0015629	Mrpl54	65	63.636	ENSNBRG00000000568	mrpl54	73	62.376	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0015629	Mrpl54	99	67.164	ENSMEUG00000013033	MRPL54	99	67.164	Notamacropus_eugenii
MGP_CAROLIEiJ_G0015629	Mrpl54	100	69.630	ENSOPRG00000010035	-	100	68.889	Ochotona_princeps
MGP_CAROLIEiJ_G0015629	Mrpl54	100	69.565	ENSODEG00000013969	MRPL54	100	68.116	Octodon_degus
MGP_CAROLIEiJ_G0015629	Mrpl54	65	64.773	ENSONIG00000002312	mrpl54	65	63.366	Oreochromis_niloticus
MGP_CAROLIEiJ_G0015629	Mrpl54	72	57.732	ENSORLG00000016960	mrpl54	71	59.091	Oryzias_latipes
MGP_CAROLIEiJ_G0015629	Mrpl54	78	54.286	ENSORLG00020014934	mrpl54	85	59.091	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0015629	Mrpl54	72	56.701	ENSORLG00015010788	mrpl54	69	57.955	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015629	Mrpl54	65	59.091	ENSOMEG00000009005	mrpl54	73	59.406	Oryzias_melastigma
MGP_CAROLIEiJ_G0015629	Mrpl54	100	72.464	ENSOGAG00000033519	-	100	71.014	Otolemur_garnettii
MGP_CAROLIEiJ_G0015629	Mrpl54	99	72.993	ENSOGAG00000026254	-	100	71.533	Otolemur_garnettii
MGP_CAROLIEiJ_G0015629	Mrpl54	100	68.841	ENSPPAG00000042418	MRPL54	100	66.667	Pan_paniscus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	69.630	ENSPPRG00000012325	MRPL54	100	67.407	Panthera_pardus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	71.631	ENSPTIG00000017727	MRPL54	100	70.213	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0015629	Mrpl54	100	68.841	ENSPTRG00000010276	MRPL54	100	66.667	Pan_troglodytes
MGP_CAROLIEiJ_G0015629	Mrpl54	100	70.290	ENSPANG00000033944	MRPL54	100	71.014	Papio_anubis
MGP_CAROLIEiJ_G0015629	Mrpl54	74	57.000	ENSPKIG00000009984	mrpl54	51	59.091	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015629	Mrpl54	66	66.292	ENSPSIG00000013587	MRPL54	93	65.909	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015629	Mrpl54	65	60.227	ENSPMGG00000015972	mrpl54	66	59.406	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	80.435	ENSPEMG00000022929	Mrpl54	100	78.986	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0015629	Mrpl54	100	66.176	ENSPCIG00000025383	MRPL54	100	66.176	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015629	Mrpl54	75	58.416	ENSPFOG00000007409	mrpl54	73	58.416	Poecilia_formosa
MGP_CAROLIEiJ_G0015629	Mrpl54	75	58.416	ENSPLAG00000001633	mrpl54	73	58.416	Poecilia_latipinna
MGP_CAROLIEiJ_G0015629	Mrpl54	75	58.416	ENSPLAG00000001640	mrpl54	73	58.416	Poecilia_latipinna
MGP_CAROLIEiJ_G0015629	Mrpl54	75	58.416	ENSPMEG00000021068	mrpl54	73	58.416	Poecilia_mexicana
MGP_CAROLIEiJ_G0015629	Mrpl54	75	58.416	ENSPMEG00000021078	mrpl54	73	58.416	Poecilia_mexicana
MGP_CAROLIEiJ_G0015629	Mrpl54	75	57.426	ENSPREG00000012425	mrpl54	73	57.426	Poecilia_reticulata
MGP_CAROLIEiJ_G0015629	Mrpl54	100	69.565	ENSPPYG00000009386	MRPL54	100	67.391	Pongo_abelii
MGP_CAROLIEiJ_G0015629	Mrpl54	100	70.290	ENSPCAG00000000690	MRPL54	100	68.841	Procavia_capensis
MGP_CAROLIEiJ_G0015629	Mrpl54	100	73.913	ENSPCOG00000027550	MRPL54	100	72.464	Propithecus_coquereli
MGP_CAROLIEiJ_G0015629	Mrpl54	65	63.636	ENSPNYG00000022006	mrpl54	60	62.376	Pundamilia_nyererei
MGP_CAROLIEiJ_G0015629	Mrpl54	63	62.353	ENSPNAG00000000077	mrpl54	75	58.654	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0015629	Mrpl54	100	88.889	ENSRNOG00000020464	Mrpl54	100	88.889	Rattus_norvegicus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	70.290	ENSRBIG00000027038	MRPL54	100	68.841	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015629	Mrpl54	100	70.290	ENSRROG00000018776	MRPL54	100	68.841	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015629	Mrpl54	100	68.841	ENSSBOG00000028081	MRPL54	100	68.116	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015629	Mrpl54	81	76.364	ENSSHAG00000002557	MRPL54	81	73.636	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015629	Mrpl54	66	58.427	ENSSFOG00015008073	mrpl54	63	57.955	Scleropages_formosus
MGP_CAROLIEiJ_G0015629	Mrpl54	65	62.500	ENSSMAG00000009226	mrpl54	77	60.377	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015629	Mrpl54	75	63.366	ENSSDUG00000009545	mrpl54	64	63.636	Seriola_dumerili
MGP_CAROLIEiJ_G0015629	Mrpl54	75	63.366	ENSSLDG00000001781	mrpl54	64	63.636	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015629	Mrpl54	65	65.909	ENSSPUG00000015361	MRPL54	67	65.909	Sphenodon_punctatus
MGP_CAROLIEiJ_G0015629	Mrpl54	75	57.426	ENSSPAG00000015601	mrpl54	73	57.426	Stegastes_partitus
MGP_CAROLIEiJ_G0015629	Mrpl54	75	57.426	ENSSPAG00000003775	-	73	57.426	Stegastes_partitus
MGP_CAROLIEiJ_G0015629	Mrpl54	80	76.577	ENSSSCG00000024242	MRPL54	100	67.391	Sus_scrofa
MGP_CAROLIEiJ_G0015629	Mrpl54	65	57.955	ENSTRUG00000004609	mrpl54	73	56.436	Takifugu_rubripes
MGP_CAROLIEiJ_G0015629	Mrpl54	65	54.545	ENSTNIG00000015468	mrpl54	73	54.455	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0015629	Mrpl54	100	70.370	ENSTTRG00000004410	MRPL54	100	70.370	Tursiops_truncatus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	70.290	ENSUAMG00000021572	MRPL54	100	68.841	Ursus_americanus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	71.014	ENSUMAG00000007416	MRPL54	100	70.290	Ursus_maritimus
MGP_CAROLIEiJ_G0015629	Mrpl54	100	71.014	ENSVVUG00000004420	MRPL54	100	69.565	Vulpes_vulpes
MGP_CAROLIEiJ_G0015629	Mrpl54	96	58.915	ENSXETG00000033250	MRPL54	95	58.915	Xenopus_tropicalis
MGP_CAROLIEiJ_G0015629	Mrpl54	65	59.091	ENSXMAG00000003500	mrpl54	73	59.406	Xiphophorus_maculatus