EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015655 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 10506 bases
Position: chr10:75705235-75715740
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0024235	zf-C2H2	PF00096.26	2e-73	1	11
MGP_CAROLIEiJ_P0024235	zf-C2H2	PF00096.26	2e-73	2	11
MGP_CAROLIEiJ_P0024235	zf-C2H2	PF00096.26	2e-73	3	11
MGP_CAROLIEiJ_P0024235	zf-C2H2	PF00096.26	2e-73	4	11
MGP_CAROLIEiJ_P0024235	zf-C2H2	PF00096.26	2e-73	5	11
MGP_CAROLIEiJ_P0024235	zf-C2H2	PF00096.26	2e-73	6	11
MGP_CAROLIEiJ_P0024235	zf-C2H2	PF00096.26	2e-73	7	11
MGP_CAROLIEiJ_P0024235	zf-C2H2	PF00096.26	2e-73	8	11
MGP_CAROLIEiJ_P0024235	zf-C2H2	PF00096.26	2e-73	9	11
MGP_CAROLIEiJ_P0024235	zf-C2H2	PF00096.26	2e-73	10	11
MGP_CAROLIEiJ_P0024235	zf-C2H2	PF00096.26	2e-73	11	11
MGP_CAROLIEiJ_P0024235	Ribosomal_L23	PF00276.20	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0024236	-	738	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0024235	-	2426	-	MGP_CAROLIEiJ_P0024235	607 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0015655's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015655's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0015655	-	93	56.299	MGP_CAROLIEiJ_G0024261	Zfp661	95	56.299
MGP_CAROLIEiJ_G0015655	-	93	50.781	MGP_CAROLIEiJ_G0031579	Zfp1	99	50.781
MGP_CAROLIEiJ_G0015655	-	80	37.126	MGP_CAROLIEiJ_G0029144	-	67	30.075
MGP_CAROLIEiJ_G0015655	-	84	37.450	MGP_CAROLIEiJ_G0029143	-	80	36.255
MGP_CAROLIEiJ_G0015655	-	80	38.376	MGP_CAROLIEiJ_G0014667	Zbtb41	51	36.393
MGP_CAROLIEiJ_G0015655	-	93	55.063	MGP_CAROLIEiJ_G0018683	Zfp493	99	55.063
MGP_CAROLIEiJ_G0015655	-	94	48.963	MGP_CAROLIEiJ_G0016306	Zfp354a	99	52.000
MGP_CAROLIEiJ_G0015655	-	91	60.870	MGP_CAROLIEiJ_G0029427	-	91	60.870
MGP_CAROLIEiJ_G0015655	-	94	48.753	MGP_CAROLIEiJ_G0029329	Zfp94	96	48.753
MGP_CAROLIEiJ_G0015655	-	81	49.184	MGP_CAROLIEiJ_G0029321	Zfp112	69	49.184
MGP_CAROLIEiJ_G0015655	-	80	48.589	MGP_CAROLIEiJ_G0029322	Zfp235	99	48.589
MGP_CAROLIEiJ_G0015655	-	79	53.555	MGP_CAROLIEiJ_G0029324	Zfp111	75	53.555
MGP_CAROLIEiJ_G0015655	-	86	57.143	MGP_CAROLIEiJ_G0029326	Zfp108	78	57.143
MGP_CAROLIEiJ_G0015655	-	79	53.358	MGP_CAROLIEiJ_G0029327	Zfp93	75	53.358
MGP_CAROLIEiJ_G0015655	-	94	53.081	MGP_CAROLIEiJ_G0018660	-	77	53.081
MGP_CAROLIEiJ_G0015655	-	81	37.526	MGP_CAROLIEiJ_G0031420	Zfp319	91	38.515
MGP_CAROLIEiJ_G0015655	-	93	33.333	MGP_CAROLIEiJ_G0020389	Zfp597	96	33.333
MGP_CAROLIEiJ_G0015655	-	93	47.619	MGP_CAROLIEiJ_G0030501	Zfp764	92	47.619
MGP_CAROLIEiJ_G0015655	-	87	37.657	MGP_CAROLIEiJ_G0024724	Zfp64	69	33.696
MGP_CAROLIEiJ_G0015655	-	94	49.423	MGP_CAROLIEiJ_G0021128	Zfp51	95	49.423
MGP_CAROLIEiJ_G0015655	-	79	50.270	MGP_CAROLIEiJ_G0018274	Zkscan4	56	52.434
MGP_CAROLIEiJ_G0015655	-	81	34.594	MGP_CAROLIEiJ_G0029356	Zfp574	71	38.776
MGP_CAROLIEiJ_G0015655	-	79	45.522	MGP_CAROLIEiJ_G0027508	Gfi1	100	45.522
MGP_CAROLIEiJ_G0015655	-	79	51.986	MGP_CAROLIEiJ_G0030498	Zfp768	51	51.408
MGP_CAROLIEiJ_G0015655	-	77	45.427	MGP_CAROLIEiJ_G0026744	Zbtb17	56	44.838
MGP_CAROLIEiJ_G0015655	-	87	45.714	MGP_CAROLIEiJ_G0022445	Zfp236	68	45.714
MGP_CAROLIEiJ_G0015655	-	93	47.619	MGP_CAROLIEiJ_G0030502	-	92	47.619
MGP_CAROLIEiJ_G0015655	-	99	49.503	MGP_CAROLIEiJ_G0018661	Zfp759	99	50.418
MGP_CAROLIEiJ_G0015655	-	78	37.500	MGP_CAROLIEiJ_G0028343	Repin1	92	36.667
MGP_CAROLIEiJ_G0015655	-	84	50.215	MGP_CAROLIEiJ_G0024901	Mynn	50	50.820
MGP_CAROLIEiJ_G0015655	-	94	46.325	MGP_CAROLIEiJ_G0021132	Zfp948	99	46.325
MGP_CAROLIEiJ_G0015655	-	79	49.485	MGP_CAROLIEiJ_G0027176	Zbtb49	68	50.000
MGP_CAROLIEiJ_G0015655	-	80	42.233	MGP_CAROLIEiJ_G0016391	Zfp672	93	45.000
MGP_CAROLIEiJ_G0015655	-	94	49.535	MGP_CAROLIEiJ_G0019949	Zfp251	94	49.535
MGP_CAROLIEiJ_G0015655	-	93	49.822	MGP_CAROLIEiJ_G0031203	Zfp882	97	49.822
MGP_CAROLIEiJ_G0015655	-	89	54.682	MGP_CAROLIEiJ_G0029612	Zfp141	72	54.682
MGP_CAROLIEiJ_G0015655	-	94	49.111	MGP_CAROLIEiJ_G0029614	Zfp715	95	50.998
MGP_CAROLIEiJ_G0015655	-	93	60.274	MGP_CAROLIEiJ_G0016437	Zfp867	95	60.274
MGP_CAROLIEiJ_G0015655	-	79	48.469	MGP_CAROLIEiJ_G0029135	Zfp628	62	48.469
MGP_CAROLIEiJ_G0015655	-	86	57.950	MGP_CAROLIEiJ_G0029490	Zfp420	99	57.950
MGP_CAROLIEiJ_G0015655	-	79	49.242	MGP_CAROLIEiJ_G0028463	Prdm5	80	39.384

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015655	-	79	58.726	ENSATEG00000003344	-	74	56.787	Anabas_testudineus
MGP_CAROLIEiJ_G0015655	-	79	53.103	ENSACLG00000011642	-	80	52.616	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015655	-	81	50.000	ENSACLG00000019270	-	83	50.000	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015655	-	79	52.431	ENSCING00000003072	-	98	52.431	Ciona_intestinalis
MGP_CAROLIEiJ_G0015655	-	80	45.098	ENSCING00000020618	-	99	45.098	Ciona_intestinalis
MGP_CAROLIEiJ_G0015655	-	78	44.186	ENSCING00000000609	-	98	43.408	Ciona_intestinalis
MGP_CAROLIEiJ_G0015655	-	80	52.647	ENSDARG00000110710	CU210890.1	96	52.647	Danio_rerio
MGP_CAROLIEiJ_G0015655	-	93	56.776	ENSDNOG00000045100	-	97	56.776	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015655	-	79	41.176	ENSEBUG00000013392	-	62	41.176	Eptatretus_burgeri
MGP_CAROLIEiJ_G0015655	-	91	44.041	ENSEBUG00000015155	-	80	44.041	Eptatretus_burgeri
MGP_CAROLIEiJ_G0015655	-	78	59.204	ENSEBUG00000015661	-	71	59.204	Eptatretus_burgeri
MGP_CAROLIEiJ_G0015655	-	79	61.364	ENSIPUG00000007934	-	97	61.364	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015655	-	79	64.352	ENSIPUG00000005581	-	76	64.352	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015655	-	79	55.844	ENSSLDG00000006217	-	77	55.844	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015655	-	79	55.844	ENSSLDG00000005868	-	79	55.844	Seriola_lalandi_dorsalis