EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015713 (Gene tree)
Gene ID: 110304110
Gene Symbol: Utp20
Alias: 3830408P06Rik|DRIM|mDRIM
Full Name: UTP20%2C small subunit processome component
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 81070 bases
Position: chr10:82570526-82651595
Accession: 110304110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0024438	DRIM	PF07539.12	1.5e-174	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0024438	-	8767	XM_021175362	MGP_CAROLIEiJ_P0024438	2788 (aa)	XP_021031021	UPI000A3186A0

Gene Model

Click here to download MGP_CAROLIEiJ_G0015713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015713's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015713	Utp20	100	85.627	ENSG00000120800	UTP20	100	85.663	Homo_sapiens
MGP_CAROLIEiJ_G0015713	Utp20	100	56.168	ENSAPOG00000002429	utp20	99	56.306	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0015713	Utp20	100	85.438	ENSAMEG00000016416	UTP20	100	85.438	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015713	Utp20	100	55.496	ENSACIG00000007987	utp20	99	55.773	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0015713	Utp20	60	56.948	ENSAOCG00000015055	utp20	96	56.948	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0015713	Utp20	100	56.154	ENSAPEG00000011605	utp20	99	56.542	Amphiprion_percula
MGP_CAROLIEiJ_G0015713	Utp20	98	54.457	ENSATEG00000005601	utp20	99	55.291	Anabas_testudineus
MGP_CAROLIEiJ_G0015713	Utp20	99	66.916	ENSAPLG00000015651	UTP20	100	67.119	Anas_platyrhynchos
MGP_CAROLIEiJ_G0015713	Utp20	100	66.584	ENSACAG00000011671	UTP20	100	66.560	Anolis_carolinensis
MGP_CAROLIEiJ_G0015713	Utp20	100	82.957	ENSANAG00000027152	UTP20	100	82.957	Aotus_nancymaae
MGP_CAROLIEiJ_G0015713	Utp20	95	59.307	ENSACLG00000008064	utp20	99	59.307	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015713	Utp20	100	55.548	ENSAMXG00000021039	utp20	99	55.713	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015713	Utp20	100	84.982	ENSBTAG00000003239	UTP20	100	84.982	Bos_taurus
MGP_CAROLIEiJ_G0015713	Utp20	100	84.753	ENSCJAG00000001913	UTP20	100	84.753	Callithrix_jacchus
MGP_CAROLIEiJ_G0015713	Utp20	100	84.971	ENSCAFG00000006964	UTP20	100	84.971	Canis_familiaris
MGP_CAROLIEiJ_G0015713	Utp20	100	84.971	ENSCAFG00020024305	UTP20	100	84.971	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015713	Utp20	100	84.701	ENSCHIG00000009221	UTP20	100	84.163	Capra_hircus
MGP_CAROLIEiJ_G0015713	Utp20	100	83.620	ENSTSYG00000003040	UTP20	100	83.626	Carlito_syrichta
MGP_CAROLIEiJ_G0015713	Utp20	99	74.371	ENSCAPG00000014920	UTP20	100	74.416	Cavia_aperea
MGP_CAROLIEiJ_G0015713	Utp20	100	76.810	ENSCPOG00000003129	UTP20	100	76.854	Cavia_porcellus
MGP_CAROLIEiJ_G0015713	Utp20	100	85.218	ENSCCAG00000031422	UTP20	100	85.218	Cebus_capucinus
MGP_CAROLIEiJ_G0015713	Utp20	100	82.553	ENSCATG00000035636	UTP20	100	82.588	Cercocebus_atys
MGP_CAROLIEiJ_G0015713	Utp20	100	79.921	ENSCLAG00000011569	UTP20	100	80.029	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015713	Utp20	100	85.412	ENSCSAG00000003388	UTP20	100	85.448	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015713	Utp20	92	92.424	ENSCHOG00000003532	UTP20	94	92.424	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0015713	Utp20	95	69.231	ENSCPBG00000004844	UTP20	99	69.305	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015713	Utp20	93	30.519	ENSCSAVG00000008252	-	97	30.375	Ciona_savignyi
MGP_CAROLIEiJ_G0015713	Utp20	100	82.007	ENSCANG00000034768	UTP20	100	83.746	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015713	Utp20	100	91.036	ENSCGRG00001017151	Utp20	100	91.036	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015713	Utp20	100	90.609	ENSCGRG00000008595	Utp20	100	90.609	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015713	Utp20	98	53.222	ENSCSEG00000014760	utp20	99	53.696	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0015713	Utp20	99	53.552	ENSCVAG00000001727	utp20	99	53.833	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015713	Utp20	99	56.108	ENSDARG00000099280	utp20	99	56.386	Danio_rerio
MGP_CAROLIEiJ_G0015713	Utp20	100	83.000	ENSDNOG00000016845	UTP20	100	83.006	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015713	Utp20	96	87.064	ENSDORG00000014762	Utp20	99	87.183	Dipodomys_ordii
MGP_CAROLIEiJ_G0015713	Utp20	94	86.564	ENSETEG00000019983	UTP20	94	88.106	Echinops_telfairi
MGP_CAROLIEiJ_G0015713	Utp20	100	85.326	ENSEASG00005019981	UTP20	99	87.429	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015713	Utp20	100	85.469	ENSECAG00000006876	UTP20	99	87.429	Equus_caballus
MGP_CAROLIEiJ_G0015713	Utp20	72	84.746	ENSEEUG00000003774	UTP20	75	83.995	Erinaceus_europaeus
MGP_CAROLIEiJ_G0015713	Utp20	100	55.750	ENSELUG00000000798	utp20	99	55.856	Esox_lucius
MGP_CAROLIEiJ_G0015713	Utp20	100	85.264	ENSFCAG00000006150	UTP20	100	85.264	Felis_catus
MGP_CAROLIEiJ_G0015713	Utp20	94	65.586	ENSFALG00000011135	UTP20	100	65.822	Ficedula_albicollis
MGP_CAROLIEiJ_G0015713	Utp20	100	67.155	ENSFDAG00000007567	UTP20	100	67.155	Fukomys_damarensis
MGP_CAROLIEiJ_G0015713	Utp20	95	53.653	ENSFHEG00000004142	utp20	99	54.537	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0015713	Utp20	99	51.709	ENSGMOG00000006762	utp20	100	52.401	Gadus_morhua
MGP_CAROLIEiJ_G0015713	Utp20	100	67.105	ENSGALG00000011643	UTP20	100	66.975	Gallus_gallus
MGP_CAROLIEiJ_G0015713	Utp20	97	53.407	ENSGAFG00000006986	utp20	99	53.726	Gambusia_affinis
MGP_CAROLIEiJ_G0015713	Utp20	100	54.688	ENSGACG00000019092	utp20	100	54.759	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0015713	Utp20	67	69.549	ENSGAGG00000011169	UTP20	97	69.390	Gopherus_agassizii
MGP_CAROLIEiJ_G0015713	Utp20	100	84.742	ENSGGOG00000004904	UTP20	100	84.778	Gorilla_gorilla
MGP_CAROLIEiJ_G0015713	Utp20	100	55.405	ENSHBUG00000010613	utp20	99	55.583	Haplochromis_burtoni
MGP_CAROLIEiJ_G0015713	Utp20	100	79.291	ENSHGLG00000006422	UTP20	100	79.219	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015713	Utp20	100	77.384	ENSHGLG00100001086	UTP20	100	77.312	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015713	Utp20	100	53.075	ENSHCOG00000005421	utp20	99	53.936	Hippocampus_comes
MGP_CAROLIEiJ_G0015713	Utp20	100	55.911	ENSIPUG00000013717	utp20	99	56.009	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015713	Utp20	100	85.955	ENSSTOG00000015995	UTP20	100	85.955	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015713	Utp20	100	85.274	ENSJJAG00000019321	Utp20	100	85.274	Jaculus_jaculus
MGP_CAROLIEiJ_G0015713	Utp20	100	53.498	ENSKMAG00000005972	utp20	99	53.569	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0015713	Utp20	98	53.280	ENSLBEG00000000781	utp20	99	54.185	Labrus_bergylta
MGP_CAROLIEiJ_G0015713	Utp20	79	62.880	ENSLACG00000010098	UTP20	100	62.953	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015713	Utp20	93	59.127	ENSLOCG00000015197	utp20	99	59.223	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0015713	Utp20	100	83.131	ENSLAFG00000012983	UTP20	100	83.488	Loxodonta_africana
MGP_CAROLIEiJ_G0015713	Utp20	100	85.484	ENSMFAG00000037766	UTP20	100	85.520	Macaca_fascicularis
MGP_CAROLIEiJ_G0015713	Utp20	100	85.627	ENSMMUG00000012891	UTP20	100	85.663	Macaca_mulatta
MGP_CAROLIEiJ_G0015713	Utp20	100	83.441	ENSMNEG00000037418	UTP20	100	83.477	Macaca_nemestrina
MGP_CAROLIEiJ_G0015713	Utp20	100	83.059	ENSMLEG00000029148	UTP20	100	83.095	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015713	Utp20	100	54.739	ENSMAMG00000002063	utp20	99	55.334	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015713	Utp20	100	55.963	ENSMZEG00005018123	utp20	99	55.959	Maylandia_zebra
MGP_CAROLIEiJ_G0015713	Utp20	100	66.880	ENSMGAG00000011726	UTP20	100	66.714	Meleagris_gallopavo
MGP_CAROLIEiJ_G0015713	Utp20	64	91.051	ENSMAUG00000011898	Utp20	100	91.051	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015713	Utp20	100	82.492	ENSMICG00000015736	UTP20	100	82.492	Microcebus_murinus
MGP_CAROLIEiJ_G0015713	Utp20	100	87.809	ENSMOCG00000015242	Utp20	100	87.809	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015713	Utp20	100	52.765	ENSMMOG00000003360	utp20	100	52.600	Mola_mola
MGP_CAROLIEiJ_G0015713	Utp20	100	72.274	ENSMODG00000003141	UTP20	100	72.248	Monodelphis_domestica
MGP_CAROLIEiJ_G0015713	Utp20	100	55.334	ENSMALG00000002723	utp20	99	55.492	Monopterus_albus
MGP_CAROLIEiJ_G0015713	Utp20	100	98.566	ENSMUSG00000004356	Utp20	100	98.566	Mus_musculus
MGP_CAROLIEiJ_G0015713	Utp20	100	96.844	MGP_PahariEiJ_G0031372	Utp20	100	96.844	Mus_pahari
MGP_CAROLIEiJ_G0015713	Utp20	100	98.244	MGP_SPRETEiJ_G0016531	Utp20	100	98.244	Mus_spretus
MGP_CAROLIEiJ_G0015713	Utp20	100	85.054	ENSMPUG00000011641	UTP20	100	85.161	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015713	Utp20	100	84.995	ENSMLUG00000002313	UTP20	100	84.665	Myotis_lucifugus
MGP_CAROLIEiJ_G0015713	Utp20	100	88.280	ENSNGAG00000013738	Utp20	100	88.280	Nannospalax_galili
MGP_CAROLIEiJ_G0015713	Utp20	81	72.308	ENSNBRG00000019464	utp20	98	73.438	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0015713	Utp20	100	85.371	ENSNLEG00000006166	UTP20	100	85.407	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015713	Utp20	89	100.000	ENSMEUG00000015457	UTP20	91	100.000	Notamacropus_eugenii
MGP_CAROLIEiJ_G0015713	Utp20	86	93.631	ENSOPRG00000010546	UTP20	87	93.631	Ochotona_princeps
MGP_CAROLIEiJ_G0015713	Utp20	100	79.621	ENSODEG00000013411	UTP20	100	79.800	Octodon_degus
MGP_CAROLIEiJ_G0015713	Utp20	100	56.112	ENSONIG00000009910	utp20	100	55.619	Oreochromis_niloticus
MGP_CAROLIEiJ_G0015713	Utp20	99	71.388	ENSOANG00000005578	UTP20	99	71.531	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0015713	Utp20	100	85.653	ENSOCUG00000010475	UTP20	100	85.653	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0015713	Utp20	94	54.757	ENSORLG00000008900	utp20	99	54.757	Oryzias_latipes
MGP_CAROLIEiJ_G0015713	Utp20	94	55.180	ENSORLG00020005879	utp20	99	55.363	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0015713	Utp20	98	50.689	ENSORLG00015002843	utp20	99	51.684	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015713	Utp20	98	52.701	ENSOMEG00000023583	utp20	99	53.234	Oryzias_melastigma
MGP_CAROLIEiJ_G0015713	Utp20	100	84.293	ENSOGAG00000015130	UTP20	100	84.120	Otolemur_garnettii
MGP_CAROLIEiJ_G0015713	Utp20	100	84.593	ENSOARG00000014722	UTP20	100	84.593	Ovis_aries
MGP_CAROLIEiJ_G0015713	Utp20	100	85.576	ENSPPAG00000001381	UTP20	100	85.576	Pan_paniscus
MGP_CAROLIEiJ_G0015713	Utp20	100	85.515	ENSPPRG00000001026	UTP20	100	85.515	Panthera_pardus
MGP_CAROLIEiJ_G0015713	Utp20	100	85.371	ENSPTIG00000020972	UTP20	100	85.371	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0015713	Utp20	100	85.627	ENSPTRG00000005349	UTP20	100	85.663	Pan_troglodytes
MGP_CAROLIEiJ_G0015713	Utp20	100	85.412	ENSPANG00000020388	UTP20	100	85.448	Papio_anubis
MGP_CAROLIEiJ_G0015713	Utp20	100	55.188	ENSPKIG00000007196	utp20	99	55.141	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015713	Utp20	94	68.899	ENSPSIG00000016689	UTP20	100	68.682	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015713	Utp20	100	54.155	ENSPMGG00000004066	utp20	99	54.552	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0015713	Utp20	100	90.459	ENSPEMG00000024120	Utp20	100	90.459	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0015713	Utp20	100	71.703	ENSPCIG00000009298	UTP20	100	71.576	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015713	Utp20	93	53.463	ENSPFOG00000003312	utp20	100	53.884	Poecilia_formosa
MGP_CAROLIEiJ_G0015713	Utp20	95	55.577	ENSPLAG00000012874	utp20	99	55.577	Poecilia_latipinna
MGP_CAROLIEiJ_G0015713	Utp20	95	54.820	ENSPMEG00000005915	utp20	99	54.820	Poecilia_mexicana
MGP_CAROLIEiJ_G0015713	Utp20	98	52.676	ENSPREG00000013285	utp20	99	53.384	Poecilia_reticulata
MGP_CAROLIEiJ_G0015713	Utp20	88	85.493	ENSPPYG00000004871	UTP20	100	85.493	Pongo_abelii
MGP_CAROLIEiJ_G0015713	Utp20	81	90.909	ENSPCAG00000012791	UTP20	83	90.909	Procavia_capensis
MGP_CAROLIEiJ_G0015713	Utp20	99	84.893	ENSPCOG00000024948	UTP20	100	84.893	Propithecus_coquereli
MGP_CAROLIEiJ_G0015713	Utp20	100	83.441	ENSPVAG00000008113	UTP20	100	83.441	Pteropus_vampyrus
MGP_CAROLIEiJ_G0015713	Utp20	100	55.083	ENSPNYG00000011561	utp20	99	55.422	Pundamilia_nyererei
MGP_CAROLIEiJ_G0015713	Utp20	100	55.796	ENSPNAG00000006176	utp20	99	56.104	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0015713	Utp20	100	93.902	ENSRNOG00000005823	Utp20	100	93.902	Rattus_norvegicus
MGP_CAROLIEiJ_G0015713	Utp20	100	83.721	ENSRBIG00000025384	UTP20	100	83.757	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015713	Utp20	100	85.448	ENSRROG00000041254	UTP20	100	85.484	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015713	Utp20	100	85.075	ENSSBOG00000035762	UTP20	100	85.075	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015713	Utp20	98	69.122	ENSSHAG00000002298	UTP20	99	69.036	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015713	Utp20	100	58.351	ENSSFOG00015001674	utp20	100	58.423	Scleropages_formosus
MGP_CAROLIEiJ_G0015713	Utp20	98	52.168	ENSSMAG00000016460	utp20	99	52.721	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015713	Utp20	100	56.393	ENSSDUG00000013730	utp20	99	56.323	Seriola_dumerili
MGP_CAROLIEiJ_G0015713	Utp20	100	56.259	ENSSLDG00000012844	utp20	99	56.305	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015713	Utp20	65	96.296	ENSSARG00000002796	-	62	96.296	Sorex_araneus
MGP_CAROLIEiJ_G0015713	Utp20	99	66.631	ENSSPUG00000004513	UTP20	99	66.595	Sphenodon_punctatus
MGP_CAROLIEiJ_G0015713	Utp20	100	56.017	ENSSPAG00000014674	utp20	99	56.031	Stegastes_partitus
MGP_CAROLIEiJ_G0015713	Utp20	100	85.233	ENSSSCG00000000869	UTP20	100	85.233	Sus_scrofa
MGP_CAROLIEiJ_G0015713	Utp20	76	67.147	ENSTGUG00000009053	-	100	67.319	Taeniopygia_guttata
MGP_CAROLIEiJ_G0015713	Utp20	99	55.501	ENSTRUG00000005849	utp20	99	55.622	Takifugu_rubripes
MGP_CAROLIEiJ_G0015713	Utp20	100	53.743	ENSTNIG00000006921	utp20	100	53.811	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0015713	Utp20	90	79.742	ENSTBEG00000011917	UTP20	92	79.742	Tupaia_belangeri
MGP_CAROLIEiJ_G0015713	Utp20	99	81.658	ENSTTRG00000017195	UTP20	100	81.658	Tursiops_truncatus
MGP_CAROLIEiJ_G0015713	Utp20	100	85.571	ENSUAMG00000016363	UTP20	100	85.571	Ursus_americanus
MGP_CAROLIEiJ_G0015713	Utp20	100	84.891	ENSUMAG00000000077	UTP20	100	84.891	Ursus_maritimus
MGP_CAROLIEiJ_G0015713	Utp20	89	86.335	ENSVPAG00000011620	UTP20	92	86.335	Vicugna_pacos
MGP_CAROLIEiJ_G0015713	Utp20	100	84.720	ENSVVUG00000018110	UTP20	100	84.720	Vulpes_vulpes
MGP_CAROLIEiJ_G0015713	Utp20	98	62.200	ENSXETG00000032346	UTP20	100	62.323	Xenopus_tropicalis
MGP_CAROLIEiJ_G0015713	Utp20	98	52.685	ENSXMAG00000006503	utp20	99	53.055	Xiphophorus_maculatus