EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015781 (Gene tree)
Gene ID: 110303066
Gene Symbol: Ccdc59
Alias: 2300004H16Rik|D10Ertd718e
Full Name: coiled-coil domain containing 59
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 6667 bases
Position: chr10:98986881-98993547
Accession: 110303066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0024692	rRNA_processing	PF08524.11	3.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0024691	-	4310	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0024693	-	511	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0024692	-	1815	XM_021173973	MGP_CAROLIEiJ_P0024692	240 (aa)	XP_021029632	UPI000A316B49

Gene Model

Click here to download MGP_CAROLIEiJ_G0015781's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015781's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015781	Ccdc59	100	70.248	ENSG00000133773	CCDC59	100	70.248	Homo_sapiens
MGP_CAROLIEiJ_G0015781	Ccdc59	86	43.498	ENSAPOG00000013793	-	98	40.625	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0015781	Ccdc59	93	70.222	ENSAMEG00000016875	CCDC59	99	70.222	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015781	Ccdc59	99	40.370	ENSACIG00000004060	ccdc59	98	40.370	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0015781	Ccdc59	85	43.946	ENSAOCG00000001895	ccdc59	86	43.049	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0015781	Ccdc59	85	43.946	ENSAPEG00000006365	ccdc59	86	43.049	Amphiprion_percula
MGP_CAROLIEiJ_G0015781	Ccdc59	85	45.923	ENSATEG00000017992	ccdc59	87	44.589	Anabas_testudineus
MGP_CAROLIEiJ_G0015781	Ccdc59	80	60.309	ENSAPLG00000007839	CCDC59	100	60.309	Anas_platyrhynchos
MGP_CAROLIEiJ_G0015781	Ccdc59	78	48.293	ENSACAG00000014707	CCDC59	99	49.223	Anolis_carolinensis
MGP_CAROLIEiJ_G0015781	Ccdc59	100	71.488	ENSANAG00000033505	CCDC59	100	71.488	Aotus_nancymaae
MGP_CAROLIEiJ_G0015781	Ccdc59	99	41.313	ENSACLG00000023759	ccdc59	98	42.642	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015781	Ccdc59	85	43.519	ENSAMXG00000036253	ccdc59	86	44.545	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015781	Ccdc59	100	71.901	ENSBTAG00000036282	CCDC59	100	71.901	Bos_taurus
MGP_CAROLIEiJ_G0015781	Ccdc59	100	69.421	ENSCJAG00000019396	CCDC59	100	69.421	Callithrix_jacchus
MGP_CAROLIEiJ_G0015781	Ccdc59	100	66.942	ENSCAFG00000023758	CCDC59	100	66.942	Canis_familiaris
MGP_CAROLIEiJ_G0015781	Ccdc59	99	72.083	ENSCHIG00000025817	-	99	72.083	Capra_hircus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	71.667	ENSCHIG00000004977	-	99	71.667	Capra_hircus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	69.748	ENSTSYG00000007979	CCDC59	98	69.748	Carlito_syrichta
MGP_CAROLIEiJ_G0015781	Ccdc59	100	71.369	ENSCPOG00000036718	CCDC59	100	71.369	Cavia_porcellus
MGP_CAROLIEiJ_G0015781	Ccdc59	100	69.835	ENSCCAG00000021997	CCDC59	100	69.835	Cebus_capucinus
MGP_CAROLIEiJ_G0015781	Ccdc59	100	70.248	ENSCATG00000044760	CCDC59	100	70.248	Cercocebus_atys
MGP_CAROLIEiJ_G0015781	Ccdc59	100	71.488	ENSCLAG00000015050	CCDC59	100	71.488	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015781	Ccdc59	100	70.248	ENSCSAG00000003867	CCDC59	100	70.248	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	68.750	ENSCHOG00000007788	CCDC59	99	68.750	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0015781	Ccdc59	94	53.744	ENSCPBG00000000075	CCDC59	98	53.744	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015781	Ccdc59	100	70.248	ENSCANG00000032140	CCDC59	100	70.248	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015781	Ccdc59	100	82.083	ENSCGRG00001015959	Ccdc59	100	82.083	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015781	Ccdc59	100	82.083	ENSCGRG00000014122	Ccdc59	100	82.083	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015781	Ccdc59	98	40.154	ENSCSEG00000008298	ccdc59	99	40.769	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0015781	Ccdc59	84	43.519	ENSCVAG00000009807	ccdc59	87	42.667	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015781	Ccdc59	87	42.222	ENSDARG00000045755	ccdc59	88	44.828	Danio_rerio
MGP_CAROLIEiJ_G0015781	Ccdc59	99	65.690	ENSETEG00000000256	CCDC59	99	65.690	Echinops_telfairi
MGP_CAROLIEiJ_G0015781	Ccdc59	99	72.289	ENSEASG00005021237	CCDC59	99	72.289	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	71.486	ENSECAG00000010450	CCDC59	99	71.486	Equus_caballus
MGP_CAROLIEiJ_G0015781	Ccdc59	56	76.190	ENSEEUG00000004885	-	56	76.190	Erinaceus_europaeus
MGP_CAROLIEiJ_G0015781	Ccdc59	87	41.558	ENSELUG00000001779	ccdc59	86	41.126	Esox_lucius
MGP_CAROLIEiJ_G0015781	Ccdc59	99	72.083	ENSFCAG00000028462	CCDC59	99	72.083	Felis_catus
MGP_CAROLIEiJ_G0015781	Ccdc59	85	58.571	ENSFALG00000010525	CCDC59	84	58.571	Ficedula_albicollis
MGP_CAROLIEiJ_G0015781	Ccdc59	100	72.314	ENSFDAG00000018726	CCDC59	100	72.314	Fukomys_damarensis
MGP_CAROLIEiJ_G0015781	Ccdc59	84	45.833	ENSFHEG00000021511	ccdc59	88	44.978	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0015781	Ccdc59	85	41.667	ENSGMOG00000018721	ccdc59	98	41.667	Gadus_morhua
MGP_CAROLIEiJ_G0015781	Ccdc59	87	53.589	ENSGALG00000028648	CCDC59	88	53.589	Gallus_gallus
MGP_CAROLIEiJ_G0015781	Ccdc59	92	42.000	ENSGAFG00000008786	ccdc59	96	42.000	Gambusia_affinis
MGP_CAROLIEiJ_G0015781	Ccdc59	86	42.411	ENSGACG00000019765	ccdc59	85	43.182	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0015781	Ccdc59	86	55.825	ENSGAGG00000017055	CCDC59	87	55.825	Gopherus_agassizii
MGP_CAROLIEiJ_G0015781	Ccdc59	100	71.488	ENSGGOG00000025296	CCDC59	100	71.488	Gorilla_gorilla
MGP_CAROLIEiJ_G0015781	Ccdc59	99	42.537	ENSHBUG00000018713	ccdc59	98	42.164	Haplochromis_burtoni
MGP_CAROLIEiJ_G0015781	Ccdc59	100	73.554	ENSHGLG00000001711	CCDC59	100	73.554	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015781	Ccdc59	100	73.967	ENSHGLG00100000248	CCDC59	100	73.967	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015781	Ccdc59	82	49.524	ENSHCOG00000004915	ccdc59	98	44.488	Hippocampus_comes
MGP_CAROLIEiJ_G0015781	Ccdc59	86	43.578	ENSIPUG00000017904	ccdc59	86	43.578	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015781	Ccdc59	100	75.934	ENSSTOG00000009858	CCDC59	100	75.934	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	70.168	ENSJJAG00000015263	Ccdc59	99	70.168	Jaculus_jaculus
MGP_CAROLIEiJ_G0015781	Ccdc59	85	42.128	ENSKMAG00000016345	ccdc59	87	43.404	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0015781	Ccdc59	93	44.444	ENSLBEG00000018654	ccdc59	91	44.444	Labrus_bergylta
MGP_CAROLIEiJ_G0015781	Ccdc59	86	53.604	ENSLACG00000016632	CCDC59	84	53.604	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015781	Ccdc59	86	55.189	ENSLOCG00000016324	ccdc59	85	55.189	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	67.227	ENSLAFG00000015368	CCDC59	99	67.227	Loxodonta_africana
MGP_CAROLIEiJ_G0015781	Ccdc59	100	69.835	ENSMFAG00000034303	CCDC59	100	69.835	Macaca_fascicularis
MGP_CAROLIEiJ_G0015781	Ccdc59	100	70.248	ENSMNEG00000037462	CCDC59	100	70.248	Macaca_nemestrina
MGP_CAROLIEiJ_G0015781	Ccdc59	100	70.248	ENSMLEG00000039811	CCDC59	100	70.248	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	43.446	ENSMAMG00000011380	ccdc59	96	44.776	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	41.264	ENSMZEG00005005994	ccdc59	98	42.164	Maylandia_zebra
MGP_CAROLIEiJ_G0015781	Ccdc59	80	57.513	ENSMGAG00000011116	CCDC59	100	57.513	Meleagris_gallopavo
MGP_CAROLIEiJ_G0015781	Ccdc59	100	80.833	ENSMAUG00000017516	Ccdc59	99	80.833	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	72.083	ENSMICG00000041747	CCDC59	99	72.083	Microcebus_murinus
MGP_CAROLIEiJ_G0015781	Ccdc59	100	78.601	ENSMOCG00000006690	Ccdc59	100	78.601	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015781	Ccdc59	99	37.500	ENSMMOG00000001931	ccdc59	98	36.653	Mola_mola
MGP_CAROLIEiJ_G0015781	Ccdc59	88	44.541	ENSMALG00000013053	ccdc59	87	44.541	Monopterus_albus
MGP_CAROLIEiJ_G0015781	Ccdc59	100	93.750	ENSMUSG00000019897	Ccdc59	100	93.750	Mus_musculus
MGP_CAROLIEiJ_G0015781	Ccdc59	100	91.250	MGP_PahariEiJ_G0031306	Ccdc59	100	91.250	Mus_pahari
MGP_CAROLIEiJ_G0015781	Ccdc59	100	94.167	MGP_SPRETEiJ_G0016603	Ccdc59	100	94.167	Mus_spretus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	61.506	ENSMPUG00000011361	CCDC59	99	61.250	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015781	Ccdc59	100	73.663	ENSMLUG00000008071	CCDC59	100	73.663	Myotis_lucifugus
MGP_CAROLIEiJ_G0015781	Ccdc59	100	76.250	ENSNGAG00000023637	Ccdc59	100	76.250	Nannospalax_galili
MGP_CAROLIEiJ_G0015781	Ccdc59	100	70.661	ENSNLEG00000033968	CCDC59	100	70.661	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015781	Ccdc59	85	49.756	ENSMEUG00000000635	-	99	46.888	Notamacropus_eugenii
MGP_CAROLIEiJ_G0015781	Ccdc59	99	42.910	ENSONIG00000011545	ccdc59	98	43.173	Oreochromis_niloticus
MGP_CAROLIEiJ_G0015781	Ccdc59	100	71.074	ENSOCUG00000017824	CCDC59	100	71.074	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0015781	Ccdc59	85	47.945	ENSORLG00000027963	ccdc59	86	47.945	Oryzias_latipes
MGP_CAROLIEiJ_G0015781	Ccdc59	85	47.442	ENSORLG00020014686	ccdc59	86	47.442	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0015781	Ccdc59	85	46.479	ENSORLG00015013061	ccdc59	86	47.945	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015781	Ccdc59	85	46.544	ENSOMEG00000007247	ccdc59	93	41.870	Oryzias_melastigma
MGP_CAROLIEiJ_G0015781	Ccdc59	99	69.328	ENSOGAG00000004383	CCDC59	99	69.328	Otolemur_garnettii
MGP_CAROLIEiJ_G0015781	Ccdc59	99	72.428	ENSOARG00000015247	CCDC59	99	72.428	Ovis_aries
MGP_CAROLIEiJ_G0015781	Ccdc59	100	62.397	ENSPPAG00000039810	-	100	62.397	Pan_paniscus
MGP_CAROLIEiJ_G0015781	Ccdc59	100	71.074	ENSPPAG00000030113	CCDC59	100	71.074	Pan_paniscus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	72.083	ENSPPRG00000022500	CCDC59	99	72.083	Panthera_pardus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	72.083	ENSPTIG00000020934	CCDC59	99	72.083	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0015781	Ccdc59	100	62.810	ENSPTRG00000048467	-	100	62.810	Pan_troglodytes
MGP_CAROLIEiJ_G0015781	Ccdc59	100	71.074	ENSPTRG00000005266	CCDC59	100	71.074	Pan_troglodytes
MGP_CAROLIEiJ_G0015781	Ccdc59	100	69.421	ENSPANG00000023011	CCDC59	100	69.421	Papio_anubis
MGP_CAROLIEiJ_G0015781	Ccdc59	85	46.460	ENSPKIG00000019649	ccdc59	85	46.575	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015781	Ccdc59	92	42.373	ENSPMGG00000009816	ccdc59	97	40.392	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0015781	Ccdc59	86	66.019	ENSPCIG00000007808	CCDC59	100	60.494	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	40.684	ENSPFOG00000005611	ccdc59	98	40.304	Poecilia_formosa
MGP_CAROLIEiJ_G0015781	Ccdc59	99	41.065	ENSPLAG00000003832	ccdc59	98	41.065	Poecilia_latipinna
MGP_CAROLIEiJ_G0015781	Ccdc59	99	40.684	ENSPMEG00000007149	ccdc59	98	40.304	Poecilia_mexicana
MGP_CAROLIEiJ_G0015781	Ccdc59	99	39.464	ENSPREG00000002686	ccdc59	98	38.697	Poecilia_reticulata
MGP_CAROLIEiJ_G0015781	Ccdc59	100	70.539	ENSPPYG00000004804	CCDC59	100	70.539	Pongo_abelii
MGP_CAROLIEiJ_G0015781	Ccdc59	78	72.872	ENSPCAG00000000679	CCDC59	100	72.872	Procavia_capensis
MGP_CAROLIEiJ_G0015781	Ccdc59	99	70.417	ENSPCOG00000013658	CCDC59	99	70.417	Propithecus_coquereli
MGP_CAROLIEiJ_G0015781	Ccdc59	99	42.642	ENSPNYG00000000586	ccdc59	98	42.164	Pundamilia_nyererei
MGP_CAROLIEiJ_G0015781	Ccdc59	87	43.363	ENSPNAG00000029087	ccdc59	88	43.363	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0015781	Ccdc59	100	90.000	ENSRNOG00000004183	Ccdc59	100	90.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0015781	Ccdc59	100	64.050	ENSRBIG00000037638	CCDC59	100	64.050	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015781	Ccdc59	100	70.248	ENSRROG00000041324	CCDC59	100	70.248	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015781	Ccdc59	100	70.370	ENSSBOG00000029711	CCDC59	100	70.370	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015781	Ccdc59	100	59.671	ENSSHAG00000007040	CCDC59	100	59.671	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015781	Ccdc59	85	46.890	ENSSFOG00015008683	ccdc59	84	46.411	Scleropages_formosus
MGP_CAROLIEiJ_G0015781	Ccdc59	85	42.128	ENSSMAG00000001292	ccdc59	77	42.672	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	41.288	ENSSDUG00000003120	ccdc59	98	41.288	Seriola_dumerili
MGP_CAROLIEiJ_G0015781	Ccdc59	99	41.353	ENSSLDG00000023499	ccdc59	98	41.353	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015781	Ccdc59	78	53.191	ENSSPUG00000011405	CCDC59	86	53.191	Sphenodon_punctatus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	43.750	ENSSPAG00000022368	ccdc59	98	43.750	Stegastes_partitus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	72.984	ENSSSCG00000038987	CCDC59	99	72.984	Sus_scrofa
MGP_CAROLIEiJ_G0015781	Ccdc59	79	57.868	ENSTGUG00000007835	CCDC59	100	57.868	Taeniopygia_guttata
MGP_CAROLIEiJ_G0015781	Ccdc59	85	47.479	ENSTRUG00000015207	ccdc59	87	47.479	Takifugu_rubripes
MGP_CAROLIEiJ_G0015781	Ccdc59	85	44.206	ENSTNIG00000011028	ccdc59	87	44.206	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0015781	Ccdc59	99	72.083	ENSTBEG00000008887	CCDC59	99	72.083	Tupaia_belangeri
MGP_CAROLIEiJ_G0015781	Ccdc59	99	73.750	ENSTTRG00000000199	CCDC59	99	73.750	Tursiops_truncatus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	68.619	ENSUAMG00000009205	CCDC59	99	68.619	Ursus_americanus
MGP_CAROLIEiJ_G0015781	Ccdc59	99	73.640	ENSVPAG00000001931	CCDC59	99	73.640	Vicugna_pacos
MGP_CAROLIEiJ_G0015781	Ccdc59	100	65.833	ENSVVUG00000010954	CCDC59	100	65.833	Vulpes_vulpes
MGP_CAROLIEiJ_G0015781	Ccdc59	94	47.009	ENSXETG00000014539	ccdc59	88	47.436	Xenopus_tropicalis
MGP_CAROLIEiJ_G0015781	Ccdc59	92	42.915	ENSXCOG00000013601	ccdc59	96	42.915	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0015781	Ccdc59	92	42.149	ENSXMAG00000011199	ccdc59	96	42.149	Xiphophorus_maculatus