EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015814 (Gene tree)
Gene ID: 110303028
Gene Symbol: Zfc3h1
Alias: Ccdc131|Psrc2
Full Name: zinc finger C3H1-type containing
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 47316 bases
Position: chr10:108184860-108232175
Accession: 110303028
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0024764	zf-C3H1	PF10650.9	5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0024765	-	1549	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0024764	-	7002	XM_021173920	MGP_CAROLIEiJ_P0024764	2000 (aa)	XP_021029579	UPI000A314B1C
MGP_CAROLIEiJ_T0024767	-	422	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0024766	-	675	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0015814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015814's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.250	ENSG00000133858	ZFC3H1	99	89.439	Homo_sapiens
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.160	ENSAMEG00000000498	ZFC3H1	99	89.650	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	44.379	ENSACIG00000015672	ZFC3H1	95	45.305	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0015814	Zfc3h1	98	49.749	ENSAOCG00000022567	ZFC3H1	92	48.785	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0015814	Zfc3h1	93	50.248	ENSATEG00000015391	ZFC3H1	91	50.405	Anabas_testudineus
MGP_CAROLIEiJ_G0015814	Zfc3h1	89	72.176	ENSAPLG00000016116	ZFC3H1	99	71.898	Anas_platyrhynchos
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	66.965	ENSACAG00000007327	ZFC3H1	96	68.060	Anolis_carolinensis
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.100	ENSANAG00000038329	ZFC3H1	99	89.089	Aotus_nancymaae
MGP_CAROLIEiJ_G0015814	Zfc3h1	84	49.676	ENSACLG00000021274	ZFC3H1	87	48.767	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015814	Zfc3h1	95	45.935	ENSAMXG00000042831	-	98	46.119	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.250	ENSBTAG00000012267	ZFC3H1	99	89.339	Bos_taurus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.000	ENSCJAG00000001384	ZFC3H1	99	89.189	Callithrix_jacchus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.397	ENSCAFG00000000453	ZFC3H1	99	89.100	Canis_familiaris
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.347	ENSCAFG00020016502	ZFC3H1	99	89.050	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.300	ENSCHIG00000020097	ZFC3H1	99	89.439	Capra_hircus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	88.917	ENSTSYG00000005471	ZFC3H1	99	88.288	Carlito_syrichta
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	86.164	ENSCPOG00000009504	ZFC3H1	99	85.300	Cavia_porcellus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.850	ENSCCAG00000035967	ZFC3H1	99	89.039	Cebus_capucinus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.050	ENSCATG00000016321	ZFC3H1	99	89.239	Cercocebus_atys
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.360	ENSCLAG00000007646	ZFC3H1	99	89.395	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.900	ENSCSAG00000004100	ZFC3H1	99	89.089	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	72.026	ENSCPBG00000013449	ZFC3H1	91	74.690	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.050	ENSCANG00000030229	ZFC3H1	99	89.239	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.172	ENSCGRG00001011660	Zfc3h1	99	89.205	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015814	Zfc3h1	89	94.516	ENSCGRG00000006894	Zfc3h1	99	94.516	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015814	Zfc3h1	92	40.668	ENSCSEG00000021462	ZFC3H1	95	40.929	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0015814	Zfc3h1	83	49.391	ENSCVAG00000019629	-	92	48.801	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.350	ENSDNOG00000010314	ZFC3H1	99	88.939	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015814	Zfc3h1	82	40.000	ENSEBUG00000003491	-	61	40.632	Eptatretus_burgeri
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.347	ENSEASG00005008229	ZFC3H1	99	88.989	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.397	ENSECAG00000026833	ZFC3H1	99	89.039	Equus_caballus
MGP_CAROLIEiJ_G0015814	Zfc3h1	97	51.760	ENSELUG00000013421	-	92	51.351	Esox_lucius
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.350	ENSFCAG00000024198	ZFC3H1	99	89.840	Felis_catus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	69.776	ENSFALG00000010320	ZFC3H1	95	71.748	Ficedula_albicollis
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.705	ENSFDAG00000017503	ZFC3H1	99	88.994	Fukomys_damarensis
MGP_CAROLIEiJ_G0015814	Zfc3h1	86	49.894	ENSGMOG00000004527	-	85	49.678	Gadus_morhua
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	70.665	ENSGALG00000010177	ZFC3H1	100	70.961	Gallus_gallus
MGP_CAROLIEiJ_G0015814	Zfc3h1	67	47.814	ENSGAFG00000013283	-	96	48.404	Gambusia_affinis
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	46.457	ENSGACG00000007651	ZFC3H1	93	48.103	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	71.350	ENSGAGG00000013798	ZFC3H1	96	74.326	Gopherus_agassizii
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.000	ENSGGOG00000025994	ZFC3H1	99	89.189	Gorilla_gorilla
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.760	ENSHGLG00000014297	ZFC3H1	99	89.200	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.610	ENSHGLG00100006263	ZFC3H1	99	89.050	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015814	Zfc3h1	53	47.761	ENSHCOG00000009144	-	74	48.756	Hippocampus_comes
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.440	ENSSTOG00000002650	ZFC3H1	99	90.390	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015814	Zfc3h1	76	48.196	ENSKMAG00000021476	-	76	48.184	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0015814	Zfc3h1	73	48.387	ENSLBEG00000012352	-	81	54.274	Labrus_bergylta
MGP_CAROLIEiJ_G0015814	Zfc3h1	95	61.559	ENSLACG00000002585	ZFC3H1	95	61.689	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	56.247	ENSLOCG00000016238	ZFC3H1	98	56.551	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	88.850	ENSLAFG00000005820	ZFC3H1	100	88.989	Loxodonta_africana
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.100	ENSMFAG00000039403	ZFC3H1	99	89.289	Macaca_fascicularis
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.100	ENSMMUG00000020943	ZFC3H1	99	89.289	Macaca_mulatta
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.050	ENSMNEG00000008807	ZFC3H1	99	89.239	Macaca_nemestrina
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.050	ENSMLEG00000029967	ZFC3H1	99	89.239	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	50.893	ENSMAMG00000021320	ZFC3H1	88	50.551	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015814	Zfc3h1	90	73.111	ENSMGAG00000010716	ZFC3H1	100	73.278	Meleagris_gallopavo
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.300	ENSMICG00000009137	ZFC3H1	99	89.540	Microcebus_murinus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	78.995	ENSMODG00000020408	ZFC3H1	99	78.692	Monodelphis_domestica
MGP_CAROLIEiJ_G0015814	Zfc3h1	100	98.000	ENSMUSG00000034163	Zfc3h1	100	98.000	Mus_musculus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	95.357	MGP_PahariEiJ_G0031273	Zfc3h1	99	95.357	Mus_pahari
MGP_CAROLIEiJ_G0015814	Zfc3h1	100	98.000	MGP_SPRETEiJ_G0016636	Zfc3h1	100	98.000	Mus_spretus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.300	ENSMPUG00000017488	ZFC3H1	99	89.740	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	86.963	ENSMLUG00000011723	ZFC3H1	99	87.077	Myotis_lucifugus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.350	ENSNGAG00000017623	Zfc3h1	99	89.284	Nannospalax_galili
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.550	ENSNLEG00000004372	ZFC3H1	99	88.739	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015814	Zfc3h1	76	87.798	ENSOPRG00000008075	ZFC3H1	78	87.798	Ochotona_princeps
MGP_CAROLIEiJ_G0015814	Zfc3h1	52	47.952	ENSONIG00000018271	ZFC3H1	99	48.231	Oreochromis_niloticus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.750	ENSOCUG00000004591	ZFC3H1	99	89.239	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0015814	Zfc3h1	83	47.983	ENSORLG00000000155	-	86	47.372	Oryzias_latipes
MGP_CAROLIEiJ_G0015814	Zfc3h1	83	47.983	ENSORLG00015020699	-	85	47.372	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015814	Zfc3h1	94	47.418	ENSOMEG00000015403	-	82	47.818	Oryzias_melastigma
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.261	ENSOGAG00000033606	ZFC3H1	99	88.500	Otolemur_garnettii
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.200	ENSOARG00000014589	ZFC3H1	99	89.339	Ovis_aries
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.050	ENSPPAG00000029409	ZFC3H1	99	89.239	Pan_paniscus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.300	ENSPPRG00000010196	ZFC3H1	99	89.790	Panthera_pardus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.300	ENSPTIG00000006898	ZFC3H1	99	89.790	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.100	ENSPTRG00000005224	ZFC3H1	99	89.289	Pan_troglodytes
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	87.800	ENSPANG00000009558	ZFC3H1	99	86.987	Papio_anubis
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	51.252	ENSPKIG00000023219	ZFC3H1	99	50.516	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	71.536	ENSPSIG00000012997	ZFC3H1	99	76.576	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015814	Zfc3h1	93	45.359	ENSPMGG00000007504	ZFC3H1	94	48.040	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	79.052	ENSPCIG00000025066	ZFC3H1	99	79.593	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015814	Zfc3h1	89	46.315	ENSPMEG00000007517	-	94	43.806	Poecilia_mexicana
MGP_CAROLIEiJ_G0015814	Zfc3h1	93	46.798	ENSPREG00000016974	ZFC3H1	93	47.944	Poecilia_reticulata
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.150	ENSPPYG00000004773	ZFC3H1	99	89.339	Pongo_abelii
MGP_CAROLIEiJ_G0015814	Zfc3h1	90	82.865	ENSPCAG00000003723	ZFC3H1	90	82.841	Procavia_capensis
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.000	ENSPCOG00000019879	ZFC3H1	99	89.189	Propithecus_coquereli
MGP_CAROLIEiJ_G0015814	Zfc3h1	96	87.054	ENSPVAG00000012354	ZFC3H1	96	87.054	Pteropus_vampyrus
MGP_CAROLIEiJ_G0015814	Zfc3h1	93	49.777	ENSPNYG00000005977	ZFC3H1	85	48.808	Pundamilia_nyererei
MGP_CAROLIEiJ_G0015814	Zfc3h1	69	48.694	ENSPNAG00000017704	-	97	45.726	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0015814	Zfc3h1	93	87.076	ENSRNOG00000053060	Zfc3h1	99	86.516	Rattus_norvegicus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	87.500	ENSRBIG00000028462	ZFC3H1	99	86.687	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.000	ENSRROG00000040039	ZFC3H1	99	89.189	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.000	ENSSBOG00000032676	ZFC3H1	99	87.988	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	78.901	ENSSHAG00000002431	ZFC3H1	98	80.503	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015814	Zfc3h1	92	51.776	ENSSFOG00015018112	ZFC3H1	95	52.916	Scleropages_formosus
MGP_CAROLIEiJ_G0015814	Zfc3h1	79	49.293	ENSSMAG00000019783	ZFC3H1	92	48.735	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015814	Zfc3h1	98	50.954	ENSSDUG00000000244	ZFC3H1	86	50.306	Seriola_dumerili
MGP_CAROLIEiJ_G0015814	Zfc3h1	87	50.488	ENSSLDG00000018408	ZFC3H1	92	50.853	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015814	Zfc3h1	78	92.751	ENSSARG00000008639	ZFC3H1	82	92.751	Sorex_araneus
MGP_CAROLIEiJ_G0015814	Zfc3h1	82	49.285	ENSSPAG00000001916	-	68	49.839	Stegastes_partitus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.950	ENSSSCG00000000509	ZFC3H1	99	92.003	Sus_scrofa
MGP_CAROLIEiJ_G0015814	Zfc3h1	100	70.100	ENSTGUG00000007206	ZFC3H1	100	70.448	Taeniopygia_guttata
MGP_CAROLIEiJ_G0015814	Zfc3h1	59	48.187	ENSTRUG00000004528	-	89	47.888	Takifugu_rubripes
MGP_CAROLIEiJ_G0015814	Zfc3h1	83	95.588	ENSTBEG00000016441	ZFC3H1	84	95.588	Tupaia_belangeri
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	88.200	ENSTTRG00000007328	ZFC3H1	99	87.688	Tursiops_truncatus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	90.500	ENSUAMG00000001880	ZFC3H1	99	89.940	Ursus_americanus
MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.890	ENSUMAG00000021131	ZFC3H1	99	89.740	Ursus_maritimus
MGP_CAROLIEiJ_G0015814	Zfc3h1	89	91.955	ENSVVUG00000008655	ZFC3H1	99	91.955	Vulpes_vulpes
MGP_CAROLIEiJ_G0015814	Zfc3h1	95	57.781	ENSXETG00000033302	ZFC3H1	99	56.845	Xenopus_tropicalis
MGP_CAROLIEiJ_G0015814	Zfc3h1	93	47.757	ENSXMAG00000006933	-	93	47.698	Xiphophorus_maculatus