EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015873 (Gene tree)
Gene ID: 110303404
Gene Symbol: Tsfm
Alias: 2310050B20Rik|9430024O13Rik|EF-TS|EF-Tsmt
Full Name: Ts translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 19097 bases
Position: chr10:119379326-119398422
Accession: 110303404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0024952	EF_TS	PF00889.19	9.5e-27	1	1
MGP_CAROLIEiJ_P0024956	EF_TS	PF00889.19	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0024952	-	1203	XM_021174500	MGP_CAROLIEiJ_P0024952	324 (aa)	XP_021030159	-
MGP_CAROLIEiJ_T0024953	-	640	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0024951	-	655	-	MGP_CAROLIEiJ_P0024951	206 (aa)	-	-
MGP_CAROLIEiJ_T0024956	-	1261	-	MGP_CAROLIEiJ_P0024956	193 (aa)	-	-
MGP_CAROLIEiJ_T0024957	-	695	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0024954	-	833	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0024955	-	674	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0015873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015873's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015873	Tsfm	96	86.262	ENSG00000123297	TSFM	100	91.667	Homo_sapiens
MGP_CAROLIEiJ_G0015873	Tsfm	96	52.973	ENSAPOG00000014844	tsfm	97	52.090	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0015873	Tsfm	99	83.333	ENSAMEG00000005452	TSFM	100	84.308	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015873	Tsfm	96	54.301	ENSACIG00000001066	tsfm	98	52.733	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0015873	Tsfm	96	51.892	ENSAOCG00000007132	tsfm	97	51.447	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0015873	Tsfm	96	52.432	ENSAPEG00000015755	tsfm	97	52.412	Amphiprion_percula
MGP_CAROLIEiJ_G0015873	Tsfm	98	51.097	ENSATEG00000001497	tsfm	99	51.097	Anabas_testudineus
MGP_CAROLIEiJ_G0015873	Tsfm	87	67.133	ENSACAG00000013044	TSFM	87	67.133	Anolis_carolinensis
MGP_CAROLIEiJ_G0015873	Tsfm	99	84.896	ENSANAG00000038019	TSFM	100	86.769	Aotus_nancymaae
MGP_CAROLIEiJ_G0015873	Tsfm	96	54.839	ENSACLG00000000139	tsfm	99	52.830	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015873	Tsfm	88	51.916	ENSAMXG00000001713	tsfm	89	51.916	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015873	Tsfm	93	86.093	ENSBTAG00000016912	TSFM	88	80.531	Bos_taurus
MGP_CAROLIEiJ_G0015873	Tsfm	84	34.000	WBGene00010094	tsfm-1	92	34.000	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0015873	Tsfm	99	83.938	ENSCJAG00000006600	TSFM	100	85.890	Callithrix_jacchus
MGP_CAROLIEiJ_G0015873	Tsfm	86	85.357	ENSCAFG00000000293	-	93	83.278	Canis_familiaris
MGP_CAROLIEiJ_G0015873	Tsfm	86	85.357	ENSCAFG00020022844	TSFM	79	78.528	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015873	Tsfm	95	83.766	ENSCHIG00000013850	TSFM	100	83.333	Capra_hircus
MGP_CAROLIEiJ_G0015873	Tsfm	73	88.936	ENSTSYG00000028892	TSFM	94	88.163	Carlito_syrichta
MGP_CAROLIEiJ_G0015873	Tsfm	60	72.539	ENSCAPG00000007733	-	100	72.195	Cavia_aperea
MGP_CAROLIEiJ_G0015873	Tsfm	91	85.522	ENSCPOG00000037732	TSFM	100	83.792	Cavia_porcellus
MGP_CAROLIEiJ_G0015873	Tsfm	98	85.340	ENSCCAG00000033254	TSFM	100	85.846	Cebus_capucinus
MGP_CAROLIEiJ_G0015873	Tsfm	99	83.854	ENSCATG00000016867	TSFM	100	85.846	Cercocebus_atys
MGP_CAROLIEiJ_G0015873	Tsfm	93	77.815	ENSCLAG00000009226	TSFM	100	77.231	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015873	Tsfm	99	83.854	ENSCSAG00000004601	TSFM	100	85.846	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015873	Tsfm	74	86.620	ENSCHOG00000002360	TSFM	81	88.235	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0015873	Tsfm	90	71.044	ENSCPBG00000018147	TSFM	88	71.044	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015873	Tsfm	86	33.442	ENSCING00000001275	-	91	33.442	Ciona_intestinalis
MGP_CAROLIEiJ_G0015873	Tsfm	74	32.867	ENSCSAVG00000007722	-	99	31.481	Ciona_savignyi
MGP_CAROLIEiJ_G0015873	Tsfm	80	85.271	ENSCANG00000030298	TSFM	92	89.516	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015873	Tsfm	99	88.482	ENSCGRG00001023000	TSFM	100	87.730	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015873	Tsfm	99	88.482	ENSCGRG00000006566	TSFM	100	87.730	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015873	Tsfm	74	53.333	ENSCSEG00000003376	tsfm	82	53.333	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0015873	Tsfm	88	54.386	ENSCVAG00000001340	tsfm	91	54.386	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015873	Tsfm	97	50.633	ENSDARG00000060748	tsfm	98	50.633	Danio_rerio
MGP_CAROLIEiJ_G0015873	Tsfm	96	82.748	ENSDNOG00000049415	TSFM	100	81.846	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015873	Tsfm	77	87.500	ENSDORG00000007272	Tsfm	94	87.500	Dipodomys_ordii
MGP_CAROLIEiJ_G0015873	Tsfm	79	47.059	FBgn0032646	mEFTs	87	40.210	Drosophila_melanogaster
MGP_CAROLIEiJ_G0015873	Tsfm	97	80.317	ENSETEG00000002686	-	100	79.692	Echinops_telfairi
MGP_CAROLIEiJ_G0015873	Tsfm	96	79.511	ENSEASG00005007292	TSFM	83	79.351	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015873	Tsfm	90	85.567	ENSECAG00000010520	TSFM	83	85.149	Equus_caballus
MGP_CAROLIEiJ_G0015873	Tsfm	98	73.545	ENSEEUG00000004147	-	100	73.545	Erinaceus_europaeus
MGP_CAROLIEiJ_G0015873	Tsfm	81	56.439	ENSELUG00000015481	tsfm	90	55.789	Esox_lucius
MGP_CAROLIEiJ_G0015873	Tsfm	89	86.505	ENSFCAG00000023794	TSFM	100	83.385	Felis_catus
MGP_CAROLIEiJ_G0015873	Tsfm	100	81.846	ENSFDAG00000016548	TSFM	100	81.846	Fukomys_damarensis
MGP_CAROLIEiJ_G0015873	Tsfm	96	54.839	ENSFHEG00000013458	tsfm	98	53.205	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0015873	Tsfm	85	52.190	ENSGMOG00000000868	tsfm	93	52.190	Gadus_morhua
MGP_CAROLIEiJ_G0015873	Tsfm	96	53.763	ENSGAFG00000021764	tsfm	98	52.885	Gambusia_affinis
MGP_CAROLIEiJ_G0015873	Tsfm	88	51.579	ENSGACG00000000697	tsfm	90	52.381	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0015873	Tsfm	92	70.199	ENSGAGG00000020897	TSFM	89	70.199	Gopherus_agassizii
MGP_CAROLIEiJ_G0015873	Tsfm	96	86.901	ENSGGOG00000001415	TSFM	100	86.154	Gorilla_gorilla
MGP_CAROLIEiJ_G0015873	Tsfm	98	52.516	ENSHBUG00000021738	tsfm	99	52.516	Haplochromis_burtoni
MGP_CAROLIEiJ_G0015873	Tsfm	94	83.987	ENSHGLG00000008559	TSFM	100	82.462	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015873	Tsfm	94	83.987	ENSHGLG00100005643	TSFM	100	82.462	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015873	Tsfm	61	64.407	ENSHCOG00000019566	-	78	68.519	Hippocampus_comes
MGP_CAROLIEiJ_G0015873	Tsfm	85	54.380	ENSHCOG00000021049	tsfm	88	54.380	Hippocampus_comes
MGP_CAROLIEiJ_G0015873	Tsfm	91	41.611	ENSIPUG00000019836	tsfm	85	41.611	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015873	Tsfm	94	84.641	ENSSTOG00000001159	TSFM	100	83.077	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015873	Tsfm	99	82.716	ENSJJAG00000012907	Tsfm	99	82.716	Jaculus_jaculus
MGP_CAROLIEiJ_G0015873	Tsfm	88	54.895	ENSKMAG00000018906	tsfm	90	54.895	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0015873	Tsfm	96	53.514	ENSLBEG00000019779	tsfm	97	52.090	Labrus_bergylta
MGP_CAROLIEiJ_G0015873	Tsfm	99	62.500	ENSLACG00000018125	TSFM	99	62.500	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015873	Tsfm	90	43.624	ENSLOCG00000006608	tsfm	91	44.631	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0015873	Tsfm	97	84.713	ENSLAFG00000015177	TSFM	100	84.000	Loxodonta_africana
MGP_CAROLIEiJ_G0015873	Tsfm	99	83.854	ENSMFAG00000036132	TSFM	100	85.846	Macaca_fascicularis
MGP_CAROLIEiJ_G0015873	Tsfm	99	83.854	ENSMMUG00000005893	TSFM	100	85.846	Macaca_mulatta
MGP_CAROLIEiJ_G0015873	Tsfm	99	83.854	ENSMNEG00000026351	TSFM	100	85.846	Macaca_nemestrina
MGP_CAROLIEiJ_G0015873	Tsfm	99	83.333	ENSMLEG00000029811	TSFM	100	85.538	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015873	Tsfm	95	56.216	ENSMAMG00000002230	tsfm	97	54.459	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015873	Tsfm	98	52.516	ENSMZEG00005008170	tsfm	99	52.516	Maylandia_zebra
MGP_CAROLIEiJ_G0015873	Tsfm	100	88.615	ENSMAUG00000011705	Tsfm	100	88.615	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015873	Tsfm	99	81.865	ENSMICG00000003812	TSFM	100	83.742	Microcebus_murinus
MGP_CAROLIEiJ_G0015873	Tsfm	99	90.052	ENSMOCG00000006104	Tsfm	100	90.432	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015873	Tsfm	89	53.633	ENSMMOG00000021854	tsfm	91	53.633	Mola_mola
MGP_CAROLIEiJ_G0015873	Tsfm	100	72.923	ENSMODG00000021351	TSFM	95	72.923	Monodelphis_domestica
MGP_CAROLIEiJ_G0015873	Tsfm	93	52.333	ENSMALG00000015046	tsfm	94	52.333	Monopterus_albus
MGP_CAROLIEiJ_G0015873	Tsfm	100	98.446	ENSMUSG00000040521	Tsfm	100	98.446	Mus_musculus
MGP_CAROLIEiJ_G0015873	Tsfm	100	97.927	MGP_PahariEiJ_G0031212	Tsfm	100	97.927	Mus_pahari
MGP_CAROLIEiJ_G0015873	Tsfm	100	98.148	MGP_SPRETEiJ_G0016699	Tsfm	100	98.148	Mus_spretus
MGP_CAROLIEiJ_G0015873	Tsfm	98	84.737	ENSMPUG00000002051	TSFM	99	84.830	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015873	Tsfm	87	87.279	ENSMLUG00000005940	TSFM	100	83.951	Myotis_lucifugus
MGP_CAROLIEiJ_G0015873	Tsfm	100	84.969	ENSNGAG00000014356	Tsfm	100	84.969	Nannospalax_galili
MGP_CAROLIEiJ_G0015873	Tsfm	90	54.639	ENSNBRG00000016413	tsfm	92	54.639	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0015873	Tsfm	99	84.896	ENSNLEG00000017178	TSFM	100	87.077	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015873	Tsfm	75	77.953	ENSMEUG00000004047	TSFM	70	77.953	Notamacropus_eugenii
MGP_CAROLIEiJ_G0015873	Tsfm	97	76.488	ENSOPRG00000006670	TSFM	100	76.590	Ochotona_princeps
MGP_CAROLIEiJ_G0015873	Tsfm	99	79.688	ENSODEG00000001882	TSFM	100	80.923	Octodon_degus
MGP_CAROLIEiJ_G0015873	Tsfm	97	46.688	ENSONIG00000019100	tsfm	98	46.688	Oreochromis_niloticus
MGP_CAROLIEiJ_G0015873	Tsfm	93	72.772	ENSOCUG00000012512	TSFM	75	77.116	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0015873	Tsfm	96	50.804	ENSORLG00000030201	tsfm	98	50.804	Oryzias_latipes
MGP_CAROLIEiJ_G0015873	Tsfm	88	53.497	ENSORLG00020004740	tsfm	98	50.482	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0015873	Tsfm	88	52.797	ENSORLG00015022703	tsfm	98	49.839	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015873	Tsfm	85	54.380	ENSOMEG00000008934	tsfm	86	54.380	Oryzias_melastigma
MGP_CAROLIEiJ_G0015873	Tsfm	99	82.154	ENSOGAG00000012235	TSFM	99	82.154	Otolemur_garnettii
MGP_CAROLIEiJ_G0015873	Tsfm	93	86.093	ENSOARG00000005095	TSFM	100	80.826	Ovis_aries
MGP_CAROLIEiJ_G0015873	Tsfm	99	83.854	ENSPPAG00000043428	TSFM	100	85.846	Pan_paniscus
MGP_CAROLIEiJ_G0015873	Tsfm	89	86.505	ENSPPRG00000009667	TSFM	100	83.385	Panthera_pardus
MGP_CAROLIEiJ_G0015873	Tsfm	89	86.851	ENSPTIG00000015290	TSFM	100	83.692	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0015873	Tsfm	99	83.854	ENSPTRG00000005152	TSFM	100	85.846	Pan_troglodytes
MGP_CAROLIEiJ_G0015873	Tsfm	98	84.293	ENSPANG00000007866	TSFM	98	84.858	Papio_anubis
MGP_CAROLIEiJ_G0015873	Tsfm	84	52.920	ENSPKIG00000008495	tsfm	85	52.920	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015873	Tsfm	64	69.014	ENSPSIG00000015776	TSFM	96	69.014	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015873	Tsfm	89	51.712	ENSPMGG00000007022	tsfm	92	51.712	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0015873	Tsfm	98	88.421	ENSPEMG00000000414	Tsfm	100	87.654	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0015873	Tsfm	100	73.148	ENSPCIG00000023619	TSFM	100	73.148	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015873	Tsfm	96	53.476	ENSPFOG00000010782	tsfm	98	52.885	Poecilia_formosa
MGP_CAROLIEiJ_G0015873	Tsfm	91	54.209	ENSPLAG00000008105	tsfm	94	54.545	Poecilia_latipinna
MGP_CAROLIEiJ_G0015873	Tsfm	96	53.226	ENSPMEG00000002567	tsfm	98	52.885	Poecilia_mexicana
MGP_CAROLIEiJ_G0015873	Tsfm	96	52.688	ENSPREG00000016696	tsfm	98	52.885	Poecilia_reticulata
MGP_CAROLIEiJ_G0015873	Tsfm	99	84.375	ENSPPYG00000004708	TSFM	85	86.462	Pongo_abelii
MGP_CAROLIEiJ_G0015873	Tsfm	92	82.581	ENSPCAG00000003789	TSFM	100	80.952	Procavia_capensis
MGP_CAROLIEiJ_G0015873	Tsfm	91	86.054	ENSPCOG00000021606	TSFM	100	83.742	Propithecus_coquereli
MGP_CAROLIEiJ_G0015873	Tsfm	91	87.075	ENSPVAG00000012141	TSFM	100	84.615	Pteropus_vampyrus
MGP_CAROLIEiJ_G0015873	Tsfm	98	52.516	ENSPNYG00000001230	tsfm	99	52.516	Pundamilia_nyererei
MGP_CAROLIEiJ_G0015873	Tsfm	93	51.803	ENSPNAG00000003241	tsfm	95	51.803	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0015873	Tsfm	98	94.737	ENSRNOG00000048843	Tsfm	100	86.728	Rattus_norvegicus
MGP_CAROLIEiJ_G0015873	Tsfm	90	88.699	ENSRBIG00000037278	TSFM	100	86.154	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015873	Tsfm	99	84.896	ENSRROG00000031769	TSFM	100	86.462	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015873	Tsfm	96	74.121	ENSSBOG00000021465	TSFM	100	73.846	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015873	Tsfm	100	72.515	ENSSHAG00000009664	TSFM	100	72.515	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015873	Tsfm	86	54.643	ENSSFOG00015014457	tsfm	90	54.643	Scleropages_formosus
MGP_CAROLIEiJ_G0015873	Tsfm	93	53.135	ENSSMAG00000002467	tsfm	96	53.135	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015873	Tsfm	96	54.054	ENSSDUG00000006833	tsfm	97	52.090	Seriola_dumerili
MGP_CAROLIEiJ_G0015873	Tsfm	61	36.667	ENSSLDG00000005996	-	73	36.667	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015873	Tsfm	97	52.941	ENSSLDG00000000715	tsfm	98	51.757	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015873	Tsfm	78	69.036	ENSSARG00000000785	-	85	68.447	Sorex_araneus
MGP_CAROLIEiJ_G0015873	Tsfm	85	68.571	ENSSPUG00000006435	TSFM	100	68.571	Sphenodon_punctatus
MGP_CAROLIEiJ_G0015873	Tsfm	96	52.973	ENSSPAG00000002548	tsfm	97	52.412	Stegastes_partitus
MGP_CAROLIEiJ_G0015873	Tsfm	97	82.447	ENSSSCG00000037767	TSFM	88	82.301	Sus_scrofa
MGP_CAROLIEiJ_G0015873	Tsfm	88	55.789	ENSTRUG00000003081	tsfm	91	55.789	Takifugu_rubripes
MGP_CAROLIEiJ_G0015873	Tsfm	90	56.069	ENSTNIG00000014578	tsfm	95	54.000	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0015873	Tsfm	97	72.619	ENSTBEG00000011603	TSFM	100	72.832	Tupaia_belangeri
MGP_CAROLIEiJ_G0015873	Tsfm	94	87.129	ENSTTRG00000008351	TSFM	100	83.232	Tursiops_truncatus
MGP_CAROLIEiJ_G0015873	Tsfm	90	87.285	ENSUAMG00000013142	TSFM	100	84.000	Ursus_americanus
MGP_CAROLIEiJ_G0015873	Tsfm	90	86.942	ENSUMAG00000020123	TSFM	100	83.692	Ursus_maritimus
MGP_CAROLIEiJ_G0015873	Tsfm	73	90.099	ENSVPAG00000000209	TSFM	72	90.099	Vicugna_pacos
MGP_CAROLIEiJ_G0015873	Tsfm	83	84.502	ENSVVUG00000016735	TSFM	91	83.746	Vulpes_vulpes
MGP_CAROLIEiJ_G0015873	Tsfm	90	63.390	ENSXETG00000009653	tsfm	98	63.390	Xenopus_tropicalis
MGP_CAROLIEiJ_G0015873	Tsfm	96	54.301	ENSXMAG00000018468	tsfm	98	53.526	Xiphophorus_maculatus