EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015930 (Gene tree)
Gene ID: 110302880
Gene Symbol: Pan2
Alias: 1200014O24Rik|Usp52
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 19115 bases
Position: chr10:120662516-120681630
Accession: 110302880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0025137	RNase_T	PF00929.24	4.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0025137	-	4452	XM_021173663	MGP_CAROLIEiJ_P0025137	1201 (aa)	XP_021029322	UPI000A316F26

Gene Model

Click here to download MGP_CAROLIEiJ_G0015930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015930	Pan2	100	74.204	ENSAPOG00000022955	pan2	100	74.442	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0015930	Pan2	100	95.533	ENSAMEG00000003824	PAN2	100	95.533	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015930	Pan2	94	82.466	ENSACIG00000013079	pan2	99	74.194	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0015930	Pan2	99	60.317	ENSACIG00000012858	PAN2	99	60.485	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0015930	Pan2	100	74.201	ENSAOCG00000022334	pan2	99	74.529	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0015930	Pan2	100	74.265	ENSAPEG00000022760	pan2	99	74.673	Amphiprion_percula
MGP_CAROLIEiJ_G0015930	Pan2	99	74.444	ENSATEG00000024030	pan2	100	75.000	Anabas_testudineus
MGP_CAROLIEiJ_G0015930	Pan2	94	83.820	ENSAPLG00000005195	PAN2	100	84.085	Anas_platyrhynchos
MGP_CAROLIEiJ_G0015930	Pan2	100	83.264	ENSACAG00000007067	PAN2	100	83.264	Anolis_carolinensis
MGP_CAROLIEiJ_G0015930	Pan2	100	95.934	ENSANAG00000036468	PAN2	100	96.154	Aotus_nancymaae
MGP_CAROLIEiJ_G0015930	Pan2	100	74.898	ENSACLG00000023674	pan2	99	75.103	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015930	Pan2	98	59.882	ENSACLG00000023821	pan2	99	59.882	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015930	Pan2	99	73.863	ENSAMXG00000005418	pan2	98	74.276	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015930	Pan2	100	95.353	ENSBTAG00000004376	PAN2	100	95.353	Bos_taurus
MGP_CAROLIEiJ_G0015930	Pan2	100	95.616	ENSCJAG00000011141	PAN2	100	95.616	Callithrix_jacchus
MGP_CAROLIEiJ_G0015930	Pan2	100	95.768	ENSCAFG00000000119	PAN2	100	95.768	Canis_familiaris
MGP_CAROLIEiJ_G0015930	Pan2	100	95.541	ENSCAFG00020024865	PAN2	100	95.541	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015930	Pan2	100	95.357	ENSCHIG00000026935	PAN2	100	95.357	Capra_hircus
MGP_CAROLIEiJ_G0015930	Pan2	100	95.937	ENSTSYG00000006927	PAN2	100	98.077	Carlito_syrichta
MGP_CAROLIEiJ_G0015930	Pan2	100	96.262	ENSCPOG00000014918	PAN2	100	96.262	Cavia_porcellus
MGP_CAROLIEiJ_G0015930	Pan2	100	95.699	ENSCCAG00000036637	PAN2	100	96.154	Cebus_capucinus
MGP_CAROLIEiJ_G0015930	Pan2	100	96.017	ENSCATG00000045076	PAN2	100	96.154	Cercocebus_atys
MGP_CAROLIEiJ_G0015930	Pan2	100	96.096	ENSCLAG00000011700	PAN2	100	96.096	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015930	Pan2	100	95.451	ENSCSAG00000005173	PAN2	100	95.451	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015930	Pan2	100	84.838	ENSCPBG00000014029	PAN2	100	84.838	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015930	Pan2	91	45.352	ENSCSAVG00000003833	-	99	51.471	Ciona_savignyi
MGP_CAROLIEiJ_G0015930	Pan2	100	93.306	ENSCANG00000017798	PAN2	100	93.306	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015930	Pan2	100	96.678	ENSCGRG00001019707	Pan2	100	96.678	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015930	Pan2	100	96.515	ENSCGRG00000009996	Pan2	100	96.515	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015930	Pan2	100	70.540	ENSCSEG00000021529	pan2	99	71.144	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0015930	Pan2	100	74.629	ENSCVAG00000010197	pan2	100	74.629	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015930	Pan2	100	73.055	ENSDARG00000074675	pan2	99	73.257	Danio_rerio
MGP_CAROLIEiJ_G0015930	Pan2	100	95.104	ENSDNOG00000010940	PAN2	100	95.104	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015930	Pan2	93	41.838	FBgn0033352	PAN2	96	41.838	Drosophila_melanogaster
MGP_CAROLIEiJ_G0015930	Pan2	75	96.639	ENSETEG00000012041	PAN2	82	96.639	Echinops_telfairi
MGP_CAROLIEiJ_G0015930	Pan2	98	59.338	ENSEBUG00000002773	pan2	98	59.338	Eptatretus_burgeri
MGP_CAROLIEiJ_G0015930	Pan2	99	96.074	ENSEASG00005005235	PAN2	99	96.074	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015930	Pan2	100	95.934	ENSECAG00000019814	PAN2	100	95.934	Equus_caballus
MGP_CAROLIEiJ_G0015930	Pan2	99	73.710	ENSELUG00000024604	pan2	99	74.077	Esox_lucius
MGP_CAROLIEiJ_G0015930	Pan2	100	95.782	ENSFCAG00000012021	PAN2	100	95.782	Felis_catus
MGP_CAROLIEiJ_G0015930	Pan2	99	83.946	ENSFALG00000000464	PAN2	98	83.946	Ficedula_albicollis
MGP_CAROLIEiJ_G0015930	Pan2	100	95.771	ENSFDAG00000017104	PAN2	100	95.771	Fukomys_damarensis
MGP_CAROLIEiJ_G0015930	Pan2	90	75.381	ENSFHEG00000000157	pan2	96	75.381	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0015930	Pan2	100	72.809	ENSGMOG00000007249	pan2	99	73.219	Gadus_morhua
MGP_CAROLIEiJ_G0015930	Pan2	100	84.272	ENSGALG00000031512	PAN2	100	84.272	Gallus_gallus
MGP_CAROLIEiJ_G0015930	Pan2	100	75.185	ENSGAFG00000000284	pan2	100	75.350	Gambusia_affinis
MGP_CAROLIEiJ_G0015930	Pan2	100	73.568	ENSGACG00000010722	pan2	99	74.059	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0015930	Pan2	100	84.507	ENSGAGG00000007868	PAN2	100	84.507	Gopherus_agassizii
MGP_CAROLIEiJ_G0015930	Pan2	100	95.695	ENSGGOG00000009115	PAN2	100	96.154	Gorilla_gorilla
MGP_CAROLIEiJ_G0015930	Pan2	100	74.754	ENSHBUG00000005234	pan2	99	75.021	Haplochromis_burtoni
MGP_CAROLIEiJ_G0015930	Pan2	99	95.736	ENSHGLG00000005647	PAN2	99	95.736	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015930	Pan2	99	95.485	ENSHGLG00100014057	PAN2	99	95.485	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015930	Pan2	100	73.753	ENSHCOG00000007920	pan2	99	73.998	Hippocampus_comes
MGP_CAROLIEiJ_G0015930	Pan2	100	73.788	ENSIPUG00000011065	PAN2	99	73.788	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015930	Pan2	95	93.789	ENSSTOG00000015974	PAN2	100	93.789	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015930	Pan2	99	95.816	ENSJJAG00000013044	Pan2	97	95.326	Jaculus_jaculus
MGP_CAROLIEiJ_G0015930	Pan2	100	74.283	ENSKMAG00000006192	pan2	99	74.710	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0015930	Pan2	93	80.223	ENSLBEG00000015763	pan2	98	80.223	Labrus_bergylta
MGP_CAROLIEiJ_G0015930	Pan2	100	72.078	ENSLACG00000018694	PAN2	100	72.159	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015930	Pan2	100	75.777	ENSLOCG00000004333	pan2	99	76.105	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0015930	Pan2	100	94.767	ENSLAFG00000014873	PAN2	100	94.767	Loxodonta_africana
MGP_CAROLIEiJ_G0015930	Pan2	100	95.930	ENSMFAG00000002293	PAN2	100	96.154	Macaca_fascicularis
MGP_CAROLIEiJ_G0015930	Pan2	100	95.930	ENSMMUG00000013482	PAN2	100	95.930	Macaca_mulatta
MGP_CAROLIEiJ_G0015930	Pan2	100	96.017	ENSMNEG00000033264	PAN2	100	96.154	Macaca_nemestrina
MGP_CAROLIEiJ_G0015930	Pan2	100	96.100	ENSMLEG00000037388	PAN2	100	96.154	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015930	Pan2	100	74.857	ENSMAMG00000001624	pan2	100	75.266	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015930	Pan2	98	60.726	ENSMZEG00005026472	pan2	98	60.726	Maylandia_zebra
MGP_CAROLIEiJ_G0015930	Pan2	100	74.898	ENSMZEG00005026462	pan2	99	75.103	Maylandia_zebra
MGP_CAROLIEiJ_G0015930	Pan2	97	84.576	ENSMGAG00000001439	PAN2	100	84.576	Meleagris_gallopavo
MGP_CAROLIEiJ_G0015930	Pan2	99	96.985	ENSMAUG00000012602	Pan2	99	96.985	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015930	Pan2	100	95.934	ENSMICG00000017661	PAN2	100	98.077	Microcebus_murinus
MGP_CAROLIEiJ_G0015930	Pan2	100	95.594	ENSMOCG00000007191	Pan2	100	95.594	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015930	Pan2	99	74.068	ENSMMOG00000009313	pan2	98	74.669	Mola_mola
MGP_CAROLIEiJ_G0015930	Pan2	100	74.612	ENSMALG00000013377	pan2	100	74.857	Monopterus_albus
MGP_CAROLIEiJ_G0015930	Pan2	100	99.417	ENSMUSG00000005682	Pan2	100	99.417	Mus_musculus
MGP_CAROLIEiJ_G0015930	Pan2	100	98.918	MGP_PahariEiJ_G0031154	Pan2	100	98.918	Mus_pahari
MGP_CAROLIEiJ_G0015930	Pan2	100	99.417	MGP_SPRETEiJ_G0016755	Pan2	100	99.417	Mus_spretus
MGP_CAROLIEiJ_G0015930	Pan2	100	96.017	ENSMPUG00000001383	PAN2	100	96.017	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015930	Pan2	100	94.440	ENSMLUG00000006737	PAN2	100	94.440	Myotis_lucifugus
MGP_CAROLIEiJ_G0015930	Pan2	100	96.512	ENSNGAG00000007930	Pan2	100	96.512	Nannospalax_galili
MGP_CAROLIEiJ_G0015930	Pan2	92	86.364	ENSNBRG00000006585	pan2	99	86.364	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0015930	Pan2	100	90.512	ENSNLEG00000017499	PAN2	100	96.154	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015930	Pan2	100	90.819	ENSMEUG00000010125	PAN2	100	90.819	Notamacropus_eugenii
MGP_CAROLIEiJ_G0015930	Pan2	100	94.637	ENSOPRG00000001468	PAN2	100	94.637	Ochotona_princeps
MGP_CAROLIEiJ_G0015930	Pan2	100	95.775	ENSODEG00000007203	PAN2	100	95.775	Octodon_degus
MGP_CAROLIEiJ_G0015930	Pan2	100	74.550	ENSONIG00000016732	pan2	100	74.795	Oreochromis_niloticus
MGP_CAROLIEiJ_G0015930	Pan2	81	74.223	ENSOANG00000005151	PAN2	99	74.323	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0015930	Pan2	100	95.934	ENSOCUG00000007227	PAN2	100	95.934	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0015930	Pan2	100	73.732	ENSORLG00000015195	pan2	100	73.895	Oryzias_latipes
MGP_CAROLIEiJ_G0015930	Pan2	100	73.895	ENSORLG00020000277	pan2	100	74.059	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0015930	Pan2	100	73.813	ENSORLG00015005193	pan2	100	73.977	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015930	Pan2	100	74.386	ENSOMEG00000022087	pan2	98	78.756	Oryzias_melastigma
MGP_CAROLIEiJ_G0015930	Pan2	100	95.775	ENSOGAG00000030620	PAN2	100	95.775	Otolemur_garnettii
MGP_CAROLIEiJ_G0015930	Pan2	100	94.955	ENSOARG00000009379	PAN2	100	94.955	Ovis_aries
MGP_CAROLIEiJ_G0015930	Pan2	100	96.017	ENSPPAG00000001208	PAN2	100	96.154	Pan_paniscus
MGP_CAROLIEiJ_G0015930	Pan2	100	95.864	ENSPPRG00000021586	PAN2	100	95.864	Panthera_pardus
MGP_CAROLIEiJ_G0015930	Pan2	100	91.941	ENSPTIG00000012494	PAN2	100	91.941	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0015930	Pan2	100	96.017	ENSPTRG00000052054	PAN2	100	96.154	Pan_troglodytes
MGP_CAROLIEiJ_G0015930	Pan2	92	95.785	ENSPANG00000018906	PAN2	100	96.154	Papio_anubis
MGP_CAROLIEiJ_G0015930	Pan2	100	74.877	ENSPKIG00000003973	pan2	99	74.877	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015930	Pan2	100	80.909	ENSPSIG00000003267	PAN2	100	80.992	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015930	Pan2	100	74.114	ENSPMGG00000023186	pan2	100	74.196	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0015930	Pan2	100	96.429	ENSPEMG00000018505	Pan2	100	96.429	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0015930	Pan2	91	68.733	ENSPMAG00000004731	pan2	100	68.733	Petromyzon_marinus
MGP_CAROLIEiJ_G0015930	Pan2	100	91.225	ENSPCIG00000024643	PAN2	100	91.225	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015930	Pan2	100	74.714	ENSPFOG00000008392	pan2	99	74.877	Poecilia_formosa
MGP_CAROLIEiJ_G0015930	Pan2	100	74.632	ENSPLAG00000009198	pan2	99	74.795	Poecilia_latipinna
MGP_CAROLIEiJ_G0015930	Pan2	100	74.917	ENSPMEG00000001484	pan2	100	75.083	Poecilia_mexicana
MGP_CAROLIEiJ_G0015930	Pan2	100	74.876	ENSPREG00000000900	pan2	100	75.041	Poecilia_reticulata
MGP_CAROLIEiJ_G0015930	Pan2	89	97.201	ENSPPYG00000004656	PAN2	100	97.201	Pongo_abelii
MGP_CAROLIEiJ_G0015930	Pan2	92	94.874	ENSPCAG00000011047	PAN2	99	94.874	Procavia_capensis
MGP_CAROLIEiJ_G0015930	Pan2	100	95.851	ENSPCOG00000018263	PAN2	100	95.851	Propithecus_coquereli
MGP_CAROLIEiJ_G0015930	Pan2	94	96.000	ENSPVAG00000007591	PAN2	94	96.000	Pteropus_vampyrus
MGP_CAROLIEiJ_G0015930	Pan2	99	74.959	ENSPNYG00000002629	pan2	99	75.186	Pundamilia_nyererei
MGP_CAROLIEiJ_G0015930	Pan2	100	74.979	ENSPNAG00000027140	pan2	99	75.226	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0015930	Pan2	100	97.671	ENSRNOG00000032441	Pan2	100	97.671	Rattus_norvegicus
MGP_CAROLIEiJ_G0015930	Pan2	100	95.934	ENSRBIG00000029591	PAN2	100	95.934	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015930	Pan2	100	95.851	ENSRROG00000041950	PAN2	100	95.851	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015930	Pan2	100	95.934	ENSSBOG00000027343	PAN2	100	96.154	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015930	Pan2	92	90.681	ENSSHAG00000000122	PAN2	100	90.681	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015930	Pan2	99	75.309	ENSSFOG00015017740	pan2	99	75.638	Scleropages_formosus
MGP_CAROLIEiJ_G0015930	Pan2	100	73.594	ENSSMAG00000020901	pan2	100	73.810	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015930	Pan2	100	74.367	ENSSDUG00000001840	pan2	99	75.000	Seriola_dumerili
MGP_CAROLIEiJ_G0015930	Pan2	100	74.304	ENSSLDG00000013866	pan2	100	74.692	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015930	Pan2	93	93.430	ENSSARG00000013350	PAN2	92	93.430	Sorex_araneus
MGP_CAROLIEiJ_G0015930	Pan2	92	84.456	ENSSPUG00000004270	PAN2	99	84.456	Sphenodon_punctatus
MGP_CAROLIEiJ_G0015930	Pan2	100	74.531	ENSSPAG00000019970	pan2	100	74.877	Stegastes_partitus
MGP_CAROLIEiJ_G0015930	Pan2	100	95.349	ENSSSCG00000000393	PAN2	100	95.349	Sus_scrofa
MGP_CAROLIEiJ_G0015930	Pan2	100	74.407	ENSTRUG00000014260	pan2	99	74.652	Takifugu_rubripes
MGP_CAROLIEiJ_G0015930	Pan2	100	74.428	ENSTNIG00000012537	pan2	99	74.898	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0015930	Pan2	80	95.853	ENSTTRG00000007150	PAN2	80	95.853	Tursiops_truncatus
MGP_CAROLIEiJ_G0015930	Pan2	100	95.537	ENSUAMG00000026522	PAN2	100	95.537	Ursus_americanus
MGP_CAROLIEiJ_G0015930	Pan2	100	96.355	ENSUMAG00000017020	PAN2	100	96.355	Ursus_maritimus
MGP_CAROLIEiJ_G0015930	Pan2	78	98.030	ENSVPAG00000007309	PAN2	85	98.030	Vicugna_pacos
MGP_CAROLIEiJ_G0015930	Pan2	100	95.685	ENSVVUG00000021878	PAN2	100	95.685	Vulpes_vulpes
MGP_CAROLIEiJ_G0015930	Pan2	99	78.435	ENSXETG00000009434	pan2	100	78.002	Xenopus_tropicalis
MGP_CAROLIEiJ_G0015930	Pan2	100	71.005	ENSXCOG00000014391	pan2	100	71.170	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0015930	Pan2	100	74.773	ENSXMAG00000011661	pan2	100	74.938	Xiphophorus_maculatus