EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015942 (Gene tree)
Gene ID: 110303302
Gene Symbol: Zc3h10
Alias: -
Full Name: zinc finger CCCH-type containing 10
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 5812 bases
Position: chr10:120903940-120909751
Accession: 110303302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0025165	zf-CCCH	PF00642.24	2.6e-12	1	2
MGP_CAROLIEiJ_P0025165	zf-CCCH	PF00642.24	2.6e-12	2	2
MGP_CAROLIEiJ_P0025165	zf-CCCH_2	PF14608.6	5.1e-09	1	3
MGP_CAROLIEiJ_P0025165	zf-CCCH_2	PF14608.6	5.1e-09	2	3
MGP_CAROLIEiJ_P0025165	zf-CCCH_2	PF14608.6	5.1e-09	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0025168	-	561	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0025165	-	3718	-	MGP_CAROLIEiJ_P0025165	435 (aa)	XP_021030038	UPI000A315529
MGP_CAROLIEiJ_T0025166	-	757	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0025167	-	996	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0015942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015942's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.241	ENSG00000135482	ZC3H10	100	97.727	Homo_sapiens
MGP_CAROLIEiJ_G0015942	Zc3h10	83	76.389	ENSAPOG00000013862	zc3h10	75	76.852	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.241	ENSAMEG00000019365	ZC3H10	100	97.241	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015942	Zc3h10	82	75.926	ENSACIG00000022311	zc3h10	100	55.340	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0015942	Zc3h10	83	76.389	ENSAOCG00000021782	zc3h10	93	61.677	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0015942	Zc3h10	83	76.389	ENSAPEG00000010972	zc3h10	93	61.677	Amphiprion_percula
MGP_CAROLIEiJ_G0015942	Zc3h10	85	73.043	ENSATEG00000024754	zc3h10	61	77.344	Anabas_testudineus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	73.853	ENSACAG00000005020	ZC3H10	95	79.093	Anolis_carolinensis
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.011	ENSANAG00000004774	ZC3H10	100	97.011	Aotus_nancymaae
MGP_CAROLIEiJ_G0015942	Zc3h10	82	76.562	ENSACLG00000001913	zc3h10	86	47.826	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015942	Zc3h10	85	72.174	ENSAMXG00000000266	zc3h10	60	76.744	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	96.782	ENSBTAG00000009542	ZC3H10	100	96.782	Bos_taurus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.471	ENSCJAG00000045638	ZC3H10	100	97.471	Callithrix_jacchus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	96.322	ENSCAFG00000000104	ZC3H10	100	96.322	Canis_familiaris
MGP_CAROLIEiJ_G0015942	Zc3h10	100	96.322	ENSCAFG00020025996	ZC3H10	100	96.322	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.011	ENSCHIG00000003359	ZC3H10	100	97.011	Capra_hircus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.931	ENSTSYG00000014379	ZC3H10	100	97.931	Carlito_syrichta
MGP_CAROLIEiJ_G0015942	Zc3h10	92	96.241	ENSCAPG00000002936	ZC3H10	100	96.241	Cavia_aperea
MGP_CAROLIEiJ_G0015942	Zc3h10	100	96.782	ENSCPOG00000032639	ZC3H10	100	96.782	Cavia_porcellus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	96.782	ENSCCAG00000020214	-	100	96.782	Cebus_capucinus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.471	ENSCATG00000012691	ZC3H10	100	97.471	Cercocebus_atys
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.471	ENSCLAG00000011346	ZC3H10	100	97.471	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.471	ENSCSAG00000018893	ZC3H10	100	97.471	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	72.874	ENSCPBG00000012828	ZC3H10	100	73.563	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.471	ENSCANG00000007357	ZC3H10	100	97.471	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.931	ENSCGRG00001004310	Zc3h10	100	97.931	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.931	ENSCGRG00000015981	Zc3h10	100	97.931	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015942	Zc3h10	91	71.918	ENSCSEG00000003687	zc3h10	86	46.502	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0015942	Zc3h10	89	75.397	ENSCVAG00000001548	zc3h10	86	46.778	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015942	Zc3h10	83	75.000	ENSDARG00000030335	zc3h10	87	77.519	Danio_rerio
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.471	ENSDNOG00000040571	ZC3H10	100	97.471	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	96.322	ENSDORG00000001081	Zc3h10	100	96.322	Dipodomys_ordii
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.241	ENSEASG00005003533	ZC3H10	100	97.241	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.471	ENSECAG00000013003	ZC3H10	100	97.471	Equus_caballus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.241	ENSFDAG00000012558	ZC3H10	100	97.241	Fukomys_damarensis
MGP_CAROLIEiJ_G0015942	Zc3h10	89	74.219	ENSFHEG00000021836	zc3h10	94	64.935	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	72.936	ENSGALG00000037941	ZC3H10	100	73.624	Gallus_gallus
MGP_CAROLIEiJ_G0015942	Zc3h10	89	75.000	ENSGAFG00000002137	zc3h10	81	46.751	Gambusia_affinis
MGP_CAROLIEiJ_G0015942	Zc3h10	88	76.984	ENSGACG00000000638	zc3h10	90	66.334	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	73.103	ENSGAGG00000020590	ZC3H10	100	73.793	Gopherus_agassizii
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.011	ENSGGOG00000039636	ZC3H10	100	97.011	Gorilla_gorilla
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.241	ENSHGLG00000015956	ZC3H10	100	97.241	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.241	ENSHGLG00100013005	ZC3H10	100	97.241	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015942	Zc3h10	83	74.419	ENSHCOG00000020331	zc3h10	99	46.170	Hippocampus_comes
MGP_CAROLIEiJ_G0015942	Zc3h10	91	59.290	ENSIPUG00000001697	zc3h10	85	74.419	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.011	ENSSTOG00000007753	ZC3H10	100	97.011	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	96.322	ENSJJAG00000001726	Zc3h10	100	96.322	Jaculus_jaculus
MGP_CAROLIEiJ_G0015942	Zc3h10	89	75.969	ENSKMAG00000017905	zc3h10	85	46.555	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0015942	Zc3h10	79	77.344	ENSLBEG00000018281	zc3h10	59	77.344	Labrus_bergylta
MGP_CAROLIEiJ_G0015942	Zc3h10	100	65.604	ENSLACG00000002390	ZC3H10	100	64.237	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015942	Zc3h10	100	96.322	ENSLAFG00000014817	ZC3H10	100	96.322	Loxodonta_africana
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.471	ENSMFAG00000027256	ZC3H10	100	97.471	Macaca_fascicularis
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.471	ENSMMUG00000021084	ZC3H10	100	97.471	Macaca_mulatta
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.471	ENSMNEG00000025282	ZC3H10	100	97.471	Macaca_nemestrina
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.471	ENSMLEG00000027930	ZC3H10	100	97.471	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015942	Zc3h10	81	76.190	ENSMAMG00000003284	zc3h10	61	77.315	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.701	ENSMAUG00000008505	Zc3h10	100	97.701	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.241	ENSMOCG00000019869	Zc3h10	100	97.241	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015942	Zc3h10	83	74.627	ENSMMOG00000021874	zc3h10	86	48.033	Mola_mola
MGP_CAROLIEiJ_G0015942	Zc3h10	85	76.498	ENSMALG00000016443	zc3h10	85	46.694	Monopterus_albus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	99.770	ENSMUSG00000039810	Zc3h10	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	99.770	MGP_PahariEiJ_G0031142	Zc3h10	100	99.770	Mus_pahari
MGP_CAROLIEiJ_G0015942	Zc3h10	100	99.310	MGP_SPRETEiJ_G0016767	Zc3h10	100	99.310	Mus_spretus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	96.782	ENSMPUG00000018496	ZC3H10	100	96.782	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015942	Zc3h10	100	92.644	ENSMLUG00000006564	ZC3H10	100	92.874	Myotis_lucifugus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.701	ENSNGAG00000011848	Zc3h10	100	97.701	Nannospalax_galili
MGP_CAROLIEiJ_G0015942	Zc3h10	79	76.852	ENSNBRG00000020931	zc3h10	86	47.727	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0015942	Zc3h10	100	86.957	ENSMEUG00000001222	ZC3H10	100	88.330	Notamacropus_eugenii
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.241	ENSODEG00000007942	ZC3H10	100	97.241	Octodon_degus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	65.924	ENSONIG00000019154	zc3h10	90	66.830	Oreochromis_niloticus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	95.872	ENSOCUG00000017349	ZC3H10	100	95.872	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0015942	Zc3h10	89	72.609	ENSORLG00000014596	zc3h10	87	46.347	Oryzias_latipes
MGP_CAROLIEiJ_G0015942	Zc3h10	89	72.174	ENSORLG00020000559	zc3h10	87	46.138	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0015942	Zc3h10	97	44.618	ENSORLG00015014077	zc3h10	87	46.347	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015942	Zc3h10	90	72.174	ENSOMEG00000023135	zc3h10	87	46.555	Oryzias_melastigma
MGP_CAROLIEiJ_G0015942	Zc3h10	100	95.862	ENSOGAG00000030676	ZC3H10	100	95.862	Otolemur_garnettii
MGP_CAROLIEiJ_G0015942	Zc3h10	100	94.023	ENSOARG00000010330	ZC3H10	100	94.023	Ovis_aries
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.241	ENSPPAG00000023790	ZC3H10	100	97.241	Pan_paniscus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.011	ENSPTIG00000006237	ZC3H10	100	97.011	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.241	ENSPTRG00000005078	ZC3H10	100	97.241	Pan_troglodytes
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.471	ENSPANG00000029620	ZC3H10	100	97.471	Papio_anubis
MGP_CAROLIEiJ_G0015942	Zc3h10	86	73.469	ENSPKIG00000007158	zc3h10	84	47.314	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015942	Zc3h10	86	70.161	ENSPSIG00000000811	ZC3H10	87	70.161	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015942	Zc3h10	94	67.056	ENSPMGG00000010570	zc3h10	92	64.563	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.701	ENSPEMG00000008278	Zc3h10	100	97.701	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0015942	Zc3h10	100	85.845	ENSPCIG00000007018	ZC3H10	100	88.128	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015942	Zc3h10	89	74.219	ENSPFOG00000006164	zc3h10	85	46.392	Poecilia_formosa
MGP_CAROLIEiJ_G0015942	Zc3h10	91	65.693	ENSPLAG00000001248	zc3h10	85	46.392	Poecilia_latipinna
MGP_CAROLIEiJ_G0015942	Zc3h10	89	74.219	ENSPMEG00000002660	zc3h10	85	45.885	Poecilia_mexicana
MGP_CAROLIEiJ_G0015942	Zc3h10	89	74.219	ENSPREG00000015323	zc3h10	85	46.598	Poecilia_reticulata
MGP_CAROLIEiJ_G0015942	Zc3h10	100	77.471	ENSPPYG00000004644	ZC3H10	100	77.011	Pongo_abelii
MGP_CAROLIEiJ_G0015942	Zc3h10	100	96.092	ENSPCAG00000005636	ZC3H10	100	96.092	Procavia_capensis
MGP_CAROLIEiJ_G0015942	Zc3h10	100	95.862	ENSPCOG00000012389	ZC3H10	100	95.862	Propithecus_coquereli
MGP_CAROLIEiJ_G0015942	Zc3h10	100	96.092	ENSPVAG00000007566	ZC3H10	100	96.092	Pteropus_vampyrus
MGP_CAROLIEiJ_G0015942	Zc3h10	79	76.562	ENSPNYG00000021193	zc3h10	86	47.826	Pundamilia_nyererei
MGP_CAROLIEiJ_G0015942	Zc3h10	76	79.703	ENSPNAG00000013796	zc3h10	57	77.500	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0015942	Zc3h10	100	99.080	ENSRNOG00000040281	Zc3h10	100	99.080	Rattus_norvegicus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.241	ENSRBIG00000019615	ZC3H10	100	97.241	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.241	ENSRROG00000013225	ZC3H10	100	97.241	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.471	ENSSBOG00000019876	ZC3H10	100	97.471	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015942	Zc3h10	100	86.270	ENSSHAG00000005568	ZC3H10	100	87.643	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015942	Zc3h10	79	78.571	ENSSFOG00015015320	zc3h10	84	47.239	Scleropages_formosus
MGP_CAROLIEiJ_G0015942	Zc3h10	79	75.115	ENSSMAG00000003388	zc3h10	87	45.791	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015942	Zc3h10	82	75.781	ENSSDUG00000006067	zc3h10	86	47.336	Seriola_dumerili
MGP_CAROLIEiJ_G0015942	Zc3h10	82	75.781	ENSSLDG00000002721	zc3h10	86	47.336	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015942	Zc3h10	73	98.649	ENSSARG00000007208	ZC3H10	73	98.649	Sorex_araneus
MGP_CAROLIEiJ_G0015942	Zc3h10	92	76.060	ENSSPUG00000014715	ZC3H10	94	77.078	Sphenodon_punctatus
MGP_CAROLIEiJ_G0015942	Zc3h10	83	76.389	ENSSPAG00000001210	zc3h10	61	76.852	Stegastes_partitus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.241	ENSSSCG00000033568	ZC3H10	100	97.241	Sus_scrofa
MGP_CAROLIEiJ_G0015942	Zc3h10	88	76.744	ENSTRUG00000009733	zc3h10	86	47.490	Takifugu_rubripes
MGP_CAROLIEiJ_G0015942	Zc3h10	91	67.633	ENSTNIG00000014558	zc3h10	95	67.391	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0015942	Zc3h10	100	96.552	ENSTTRG00000016415	ZC3H10	100	96.552	Tursiops_truncatus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	92.157	ENSUAMG00000010526	ZC3H10	100	92.157	Ursus_americanus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.241	ENSUMAG00000016780	ZC3H10	100	97.241	Ursus_maritimus
MGP_CAROLIEiJ_G0015942	Zc3h10	100	97.011	ENSVPAG00000009524	ZC3H10	100	97.011	Vicugna_pacos
MGP_CAROLIEiJ_G0015942	Zc3h10	100	96.322	ENSVVUG00000021999	ZC3H10	100	96.322	Vulpes_vulpes
MGP_CAROLIEiJ_G0015942	Zc3h10	94	63.364	ENSXETG00000009476	zc3h10	95	65.155	Xenopus_tropicalis
MGP_CAROLIEiJ_G0015942	Zc3h10	87	75.000	ENSXCOG00000018650	zc3h10	85	47.107	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0015942	Zc3h10	89	75.000	ENSXMAG00000002294	zc3h10	85	46.584	Xiphophorus_maculatus