EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015953 (Gene tree)
Gene ID: 110304108
Gene Symbol: Pym1
Alias: A030010B05Rik|PYM Protein|Pym|Wibg
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 19604 bases
Position: chr10:121112450-121132053
Accession: 110304108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0025195	Mago-bind	PF09282.10	1.2e-13	1	1
MGP_CAROLIEiJ_P0025194	Mago-bind	PF09282.10	2.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0025195	-	1162	XM_021175358	MGP_CAROLIEiJ_P0025195	202 (aa)	XP_021031017	UPI000A319C2B
MGP_CAROLIEiJ_T0025194	-	1168	XM_021175357	MGP_CAROLIEiJ_P0025194	203 (aa)	XP_021031016	UPI000A31B0FA

Gene Model

Click here to download MGP_CAROLIEiJ_G0015953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015953's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015953	Pym1	94	90.576	ENSG00000170473	PYM1	94	90.576	Homo_sapiens
MGP_CAROLIEiJ_G0015953	Pym1	99	57.277	ENSAPOG00000023045	pym1	93	58.209	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0015953	Pym1	93	85.106	ENSAMEG00000003091	PYM1	93	85.106	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015953	Pym1	99	57.209	ENSACIG00000012769	pym1	93	59.314	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0015953	Pym1	99	57.820	ENSAOCG00000021358	pym1	93	60.000	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0015953	Pym1	99	57.820	ENSAPEG00000022679	pym1	93	60.000	Amphiprion_percula
MGP_CAROLIEiJ_G0015953	Pym1	99	56.338	ENSATEG00000024022	pym1	93	60.000	Anabas_testudineus
MGP_CAROLIEiJ_G0015953	Pym1	94	66.502	ENSACAG00000005714	PYM1	94	66.502	Anolis_carolinensis
MGP_CAROLIEiJ_G0015953	Pym1	94	89.529	ENSANAG00000036967	PYM1	94	89.529	Aotus_nancymaae
MGP_CAROLIEiJ_G0015953	Pym1	100	55.046	ENSAMXG00000007650	pym1	92	59.113	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015953	Pym1	94	87.958	ENSBTAG00000031146	PYM1	94	87.958	Bos_taurus
MGP_CAROLIEiJ_G0015953	Pym1	50	34.615	WBGene00011871	T20G5.9	63	34.615	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0015953	Pym1	94	89.529	ENSCJAG00000041077	PYM1	94	89.529	Callithrix_jacchus
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSCAFG00000000076	PYM1	94	90.052	Canis_familiaris
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSCAFG00020026099	PYM1	94	90.052	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015953	Pym1	94	86.911	ENSCHIG00000026207	PYM1	94	86.911	Capra_hircus
MGP_CAROLIEiJ_G0015953	Pym1	94	87.958	ENSTSYG00000000787	PYM1	94	87.958	Carlito_syrichta
MGP_CAROLIEiJ_G0015953	Pym1	88	89.385	ENSCAPG00000010374	PYM1	94	89.385	Cavia_aperea
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSCPOG00000031546	PYM1	94	90.052	Cavia_porcellus
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSCCAG00000026187	PYM1	94	90.052	Cebus_capucinus
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSCATG00000018801	PYM1	94	90.052	Cercocebus_atys
MGP_CAROLIEiJ_G0015953	Pym1	94	85.340	ENSCLAG00000007964	PYM1	94	85.340	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015953	Pym1	89	89.444	ENSCSAG00000005291	PYM1	93	88.950	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015953	Pym1	98	38.278	ENSCING00000006448	-	94	40.704	Ciona_intestinalis
MGP_CAROLIEiJ_G0015953	Pym1	98	36.889	ENSCSAVG00000009805	-	89	38.605	Ciona_savignyi
MGP_CAROLIEiJ_G0015953	Pym1	98	83.249	ENSCANG00000019757	-	87	85.263	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSCANG00000020338	-	94	90.052	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015953	Pym1	94	94.737	ENSCGRG00001018051	-	94	94.737	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015953	Pym1	94	78.421	ENSCGRG00001004231	-	93	80.628	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015953	Pym1	94	94.737	ENSCGRG00000012495	-	94	94.737	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015953	Pym1	94	78.421	ENSCGRG00000018933	-	93	80.628	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015953	Pym1	93	57.868	ENSCSEG00000021531	pym1	93	57.868	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0015953	Pym1	94	58.209	ENSCVAG00000017360	pym1	79	59.574	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015953	Pym1	99	55.093	ENSDARG00000046024	pym1	92	56.863	Danio_rerio
MGP_CAROLIEiJ_G0015953	Pym1	94	86.387	ENSDNOG00000048414	PYM1	86	86.387	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSDORG00000029448	Pym1	94	90.526	Dipodomys_ordii
MGP_CAROLIEiJ_G0015953	Pym1	97	32.727	FBgn0034918	Pym	92	33.019	Drosophila_melanogaster
MGP_CAROLIEiJ_G0015953	Pym1	89	82.682	ENSETEG00000004461	-	94	82.682	Echinops_telfairi
MGP_CAROLIEiJ_G0015953	Pym1	93	85.106	ENSEASG00005002271	PYM1	85	85.561	Equus_asinus_asinus
MGP_CAROLIEiJ_G0015953	Pym1	94	89.529	ENSECAG00000011870	PYM1	94	89.529	Equus_caballus
MGP_CAROLIEiJ_G0015953	Pym1	96	57.789	ENSELUG00000024250	pym1	93	59.067	Esox_lucius
MGP_CAROLIEiJ_G0015953	Pym1	94	89.005	ENSFCAG00000013967	PYM1	94	89.005	Felis_catus
MGP_CAROLIEiJ_G0015953	Pym1	94	89.529	ENSFDAG00000006314	PYM1	94	89.529	Fukomys_damarensis
MGP_CAROLIEiJ_G0015953	Pym1	93	58.291	ENSFHEG00000005884	pym1	93	58.291	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0015953	Pym1	94	57.360	ENSGMOG00000007239	pym1	93	57.360	Gadus_morhua
MGP_CAROLIEiJ_G0015953	Pym1	94	69.231	ENSGALG00000046169	PYM1	94	69.543	Gallus_gallus
MGP_CAROLIEiJ_G0015953	Pym1	99	57.277	ENSGAFG00000003280	pym1	93	57.214	Gambusia_affinis
MGP_CAROLIEiJ_G0015953	Pym1	100	53.659	ENSGACG00000010703	pym1	92	56.250	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0015953	Pym1	92	61.765	ENSGAGG00000001973	PYM1	88	61.765	Gopherus_agassizii
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSGGOG00000043246	PYM1	94	90.052	Gorilla_gorilla
MGP_CAROLIEiJ_G0015953	Pym1	93	58.000	ENSHBUG00000012719	pym1	93	59.500	Haplochromis_burtoni
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSHGLG00000017155	PYM1	94	90.052	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSHGLG00100015341	PYM1	94	90.052	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015953	Pym1	99	60.096	ENSHCOG00000007987	pym1	80	60.714	Hippocampus_comes
MGP_CAROLIEiJ_G0015953	Pym1	100	57.143	ENSIPUG00000005975	wibga	93	57.921	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015953	Pym1	94	91.099	ENSSTOG00000014206	PYM1	94	91.099	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015953	Pym1	94	89.005	ENSJJAG00000013338	Pym1	94	89.005	Jaculus_jaculus
MGP_CAROLIEiJ_G0015953	Pym1	99	54.709	ENSKMAG00000006351	pym1	93	54.976	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0015953	Pym1	99	57.212	ENSLBEG00000015707	pym1	93	57.653	Labrus_bergylta
MGP_CAROLIEiJ_G0015953	Pym1	93	57.711	ENSLACG00000014398	PYM1	93	58.000	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015953	Pym1	94	87.958	ENSLAFG00000002369	PYM1	94	87.958	Loxodonta_africana
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSMFAG00000003048	PYM1	94	90.052	Macaca_fascicularis
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSMMUG00000011002	PYM1	94	90.052	Macaca_mulatta
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSMNEG00000034677	PYM1	94	90.052	Macaca_nemestrina
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSMLEG00000007971	PYM1	94	90.052	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015953	Pym1	99	57.534	ENSMAMG00000001588	pym1	93	58.454	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015953	Pym1	93	57.500	ENSMZEG00005026458	pym1	93	59.000	Maylandia_zebra
MGP_CAROLIEiJ_G0015953	Pym1	94	93.684	ENSMAUG00000007318	Pym1	94	93.684	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015953	Pym1	94	88.482	ENSMICG00000032962	PYM1	94	88.482	Microcebus_murinus
MGP_CAROLIEiJ_G0015953	Pym1	94	91.579	ENSMOCG00000010208	Pym1	94	91.579	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015953	Pym1	99	58.537	ENSMMOG00000009301	pym1	94	58.376	Mola_mola
MGP_CAROLIEiJ_G0015953	Pym1	99	56.667	ENSMALG00000013496	pym1	93	57.711	Monopterus_albus
MGP_CAROLIEiJ_G0015953	Pym1	100	98.030	ENSMUSG00000064030	Pym1	100	98.030	Mus_musculus
MGP_CAROLIEiJ_G0015953	Pym1	100	97.525	MGP_PahariEiJ_G0031131	Pym1	100	97.525	Mus_pahari
MGP_CAROLIEiJ_G0015953	Pym1	100	98.522	MGP_SPRETEiJ_G0016778	Pym1	100	98.522	Mus_spretus
MGP_CAROLIEiJ_G0015953	Pym1	94	89.529	ENSMPUG00000000931	PYM1	94	89.529	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015953	Pym1	94	82.199	ENSMLUG00000003586	PYM1	94	82.199	Myotis_lucifugus
MGP_CAROLIEiJ_G0015953	Pym1	89	90.556	ENSNGAG00000019207	Pym1	87	91.061	Nannospalax_galili
MGP_CAROLIEiJ_G0015953	Pym1	99	58.019	ENSNBRG00000006951	pym1	93	59.500	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0015953	Pym1	94	90.576	ENSNLEG00000017588	PYM1	94	90.576	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015953	Pym1	88	78.090	ENSMEUG00000001017	PYM1	93	77.966	Notamacropus_eugenii
MGP_CAROLIEiJ_G0015953	Pym1	94	83.854	ENSOPRG00000007797	PYM1	94	83.854	Ochotona_princeps
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSODEG00000004289	PYM1	94	90.052	Octodon_degus
MGP_CAROLIEiJ_G0015953	Pym1	93	57.143	ENSONIG00000016740	pym1	93	58.621	Oreochromis_niloticus
MGP_CAROLIEiJ_G0015953	Pym1	89	88.889	ENSOCUG00000025969	PYM1	81	88.889	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0015953	Pym1	99	59.809	ENSORLG00000030592	pym1	93	60.204	Oryzias_latipes
MGP_CAROLIEiJ_G0015953	Pym1	99	59.242	ENSORLG00020011264	pym1	93	60.101	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0015953	Pym1	99	60.577	ENSORLG00015005287	pym1	93	61.026	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015953	Pym1	99	60.680	ENSOMEG00000022250	pym1	93	60.825	Oryzias_melastigma
MGP_CAROLIEiJ_G0015953	Pym1	91	86.957	ENSOGAG00000007038	PYM1	90	86.957	Otolemur_garnettii
MGP_CAROLIEiJ_G0015953	Pym1	94	87.435	ENSOARG00000010856	PYM1	94	87.435	Ovis_aries
MGP_CAROLIEiJ_G0015953	Pym1	94	90.576	ENSPPAG00000043630	PYM1	94	90.576	Pan_paniscus
MGP_CAROLIEiJ_G0015953	Pym1	94	87.958	ENSPPRG00000013243	PYM1	94	87.958	Panthera_pardus
MGP_CAROLIEiJ_G0015953	Pym1	94	87.958	ENSPTIG00000017380	PYM1	94	87.958	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0015953	Pym1	94	90.576	ENSPTRG00000005067	PYM1	94	90.576	Pan_troglodytes
MGP_CAROLIEiJ_G0015953	Pym1	94	89.529	ENSPANG00000009562	PYM1	94	89.529	Papio_anubis
MGP_CAROLIEiJ_G0015953	Pym1	100	61.792	ENSPKIG00000006301	pym1	93	61.929	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015953	Pym1	94	60.697	ENSPSIG00000003043	PYM1	94	60.697	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015953	Pym1	100	58.373	ENSPMGG00000023161	pym1	92	59.278	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0015953	Pym1	94	92.105	ENSPEMG00000009372	Pym1	94	92.105	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0015953	Pym1	92	76.344	ENSPCIG00000024658	PYM1	90	76.344	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015953	Pym1	99	59.155	ENSPFOG00000008193	pym1	93	59.204	Poecilia_formosa
MGP_CAROLIEiJ_G0015953	Pym1	99	59.155	ENSPLAG00000009228	pym1	93	59.204	Poecilia_latipinna
MGP_CAROLIEiJ_G0015953	Pym1	99	59.155	ENSPMEG00000001505	pym1	93	59.204	Poecilia_mexicana
MGP_CAROLIEiJ_G0015953	Pym1	94	87.500	ENSPPYG00000004635	PYM1	93	88.950	Pongo_abelii
MGP_CAROLIEiJ_G0015953	Pym1	94	89.005	ENSPCOG00000019706	PYM1	94	89.005	Propithecus_coquereli
MGP_CAROLIEiJ_G0015953	Pym1	94	87.500	ENSPVAG00000011437	PYM1	94	87.500	Pteropus_vampyrus
MGP_CAROLIEiJ_G0015953	Pym1	93	58.291	ENSPNYG00000012871	pym1	93	59.799	Pundamilia_nyererei
MGP_CAROLIEiJ_G0015953	Pym1	99	58.257	ENSPNAG00000018833	pym1	93	60.194	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0015953	Pym1	94	93.717	ENSRNOG00000058130	Pym1	94	93.717	Rattus_norvegicus
MGP_CAROLIEiJ_G0015953	Pym1	94	72.775	ENSRNOG00000049415	AABR07055413.1	94	72.775	Rattus_norvegicus
MGP_CAROLIEiJ_G0015953	Pym1	94	85.340	ENSRBIG00000033362	PYM1	94	85.340	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSRROG00000043620	PYM1	94	90.052	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	ENSSBOG00000029393	PYM1	94	90.052	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015953	Pym1	93	79.365	ENSSHAG00000008280	PYM1	93	79.365	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015953	Pym1	93	61.458	ENSSFOG00015021475	pym1	92	61.458	Scleropages_formosus
MGP_CAROLIEiJ_G0015953	Pym1	99	59.242	ENSSMAG00000020912	pym1	93	59.799	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015953	Pym1	99	55.814	ENSSDUG00000001807	pym1	94	57.005	Seriola_dumerili
MGP_CAROLIEiJ_G0015953	Pym1	99	59.512	ENSSLDG00000013730	pym1	93	61.340	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015953	Pym1	89	87.778	ENSSARG00000009569	PYM1	94	87.778	Sorex_araneus
MGP_CAROLIEiJ_G0015953	Pym1	92	62.245	ENSSPUG00000015059	PYM1	94	62.245	Sphenodon_punctatus
MGP_CAROLIEiJ_G0015953	Pym1	99	57.477	ENSSPAG00000020100	pym1	93	59.113	Stegastes_partitus
MGP_CAROLIEiJ_G0015953	Pym1	94	88.482	ENSSSCG00000040825	PYM1	94	88.482	Sus_scrofa
MGP_CAROLIEiJ_G0015953	Pym1	99	55.769	ENSTRUG00000021367	pym1	93	56.633	Takifugu_rubripes
MGP_CAROLIEiJ_G0015953	Pym1	99	55.340	ENSTNIG00000012534	pym1	92	58.333	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0015953	Pym1	89	83.333	ENSTBEG00000004208	PYM1	94	83.333	Tupaia_belangeri
MGP_CAROLIEiJ_G0015953	Pym1	94	86.458	ENSTTRG00000014971	PYM1	94	86.957	Tursiops_truncatus
MGP_CAROLIEiJ_G0015953	Pym1	94	89.529	ENSUAMG00000014521	PYM1	94	89.529	Ursus_americanus
MGP_CAROLIEiJ_G0015953	Pym1	94	87.500	ENSUMAG00000016241	PYM1	84	87.568	Ursus_maritimus
MGP_CAROLIEiJ_G0015953	Pym1	94	89.529	ENSVVUG00000022749	PYM1	94	89.529	Vulpes_vulpes
MGP_CAROLIEiJ_G0015953	Pym1	94	59.487	ENSXETG00000021850	pym1	94	59.487	Xenopus_tropicalis
MGP_CAROLIEiJ_G0015953	Pym1	99	57.346	ENSXMAG00000011649	pym1	93	57.286	Xiphophorus_maculatus