EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0015958 (Gene tree)
Gene ID: 110303258
Gene Symbol: -
Alias: 1110005A23Rik
Full Name: SAP domain containing ribonucleoprotein
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 55472 bases
Position: chr10:121188652-121244123
Accession: 110303258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0025202	SAP	PF02037.27	9.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0025202	-	1068	XM_021174308	MGP_CAROLIEiJ_P0025202	210 (aa)	XP_021029967	UPI00000011CF

Gene Model

Click here to download MGP_CAROLIEiJ_G0015958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0015958's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSG00000205323	SARNP	100	95.714	Homo_sapiens
MGP_CAROLIEiJ_G0015958	-	90	58.883	ENSAPOG00000005247	sarnp	78	58.883	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSAMEG00000011769	SARNP	100	95.714	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0015958	-	98	58.605	ENSAPEG00000016710	sarnp	99	59.070	Amphiprion_percula
MGP_CAROLIEiJ_G0015958	-	98	59.906	ENSATEG00000024594	sarnp	99	59.906	Anabas_testudineus
MGP_CAROLIEiJ_G0015958	-	99	82.212	ENSACAG00000015446	SARNP	98	82.212	Anolis_carolinensis
MGP_CAROLIEiJ_G0015958	-	100	83.333	ENSANAG00000025021	-	100	85.714	Aotus_nancymaae
MGP_CAROLIEiJ_G0015958	-	100	94.762	ENSANAG00000027405	-	100	94.762	Aotus_nancymaae
MGP_CAROLIEiJ_G0015958	-	98	57.870	ENSACLG00000016479	sarnp	99	57.870	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0015958	-	98	60.377	ENSAMXG00000004834	sarnp	99	61.792	Astyanax_mexicanus
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSBTAG00000020662	SARNP	100	95.714	Bos_taurus
MGP_CAROLIEiJ_G0015958	-	93	81.122	ENSBTAG00000032446	-	100	76.056	Bos_taurus
MGP_CAROLIEiJ_G0015958	-	100	94.286	ENSCJAG00000007853	-	100	94.286	Callithrix_jacchus
MGP_CAROLIEiJ_G0015958	-	95	95.500	ENSCAFG00000023714	SARNP	95	95.500	Canis_familiaris
MGP_CAROLIEiJ_G0015958	-	100	83.099	ENSCAFG00020026107	SARNP	100	83.099	Canis_lupus_dingo
MGP_CAROLIEiJ_G0015958	-	99	85.990	ENSCHIG00000013335	-	98	85.990	Capra_hircus
MGP_CAROLIEiJ_G0015958	-	100	76.190	ENSCHIG00000017443	-	100	78.571	Capra_hircus
MGP_CAROLIEiJ_G0015958	-	100	97.143	ENSTSYG00000009225	SARNP	100	97.143	Carlito_syrichta
MGP_CAROLIEiJ_G0015958	-	100	96.190	ENSCPOG00000011755	-	100	96.190	Cavia_porcellus
MGP_CAROLIEiJ_G0015958	-	100	83.810	ENSCCAG00000004296	-	95	83.495	Cebus_capucinus
MGP_CAROLIEiJ_G0015958	-	100	74.762	ENSCCAG00000030892	-	98	74.762	Cebus_capucinus
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSCCAG00000019247	-	100	95.714	Cebus_capucinus
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSCATG00000045088	SARNP	100	95.714	Cercocebus_atys
MGP_CAROLIEiJ_G0015958	-	100	86.190	ENSCATG00000042076	-	98	86.190	Cercocebus_atys
MGP_CAROLIEiJ_G0015958	-	100	96.190	ENSCLAG00000007774	-	100	96.190	Chinchilla_lanigera
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSCSAG00000005303	SARNP	98	95.714	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0015958	-	94	91.414	ENSCHOG00000005081	SARNP	100	91.414	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0015958	-	99	86.124	ENSCPBG00000012618	SARNP	99	86.124	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0015958	-	99	34.211	ENSCING00000015811	-	99	38.158	Ciona_intestinalis
MGP_CAROLIEiJ_G0015958	-	100	95.238	ENSCANG00000027918	-	100	95.238	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0015958	-	100	98.571	ENSCGRG00001018129	-	100	98.571	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015958	-	100	79.524	ENSCGRG00001013880	-	100	79.524	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015958	-	98	73.430	ENSCGRG00001022403	-	78	73.659	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0015958	-	100	98.571	ENSCGRG00000015182	-	100	98.571	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015958	-	100	79.524	ENSCGRG00000004298	-	100	79.524	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015958	-	99	79.426	ENSCGRG00000000109	-	76	80.000	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0015958	-	98	56.221	ENSCVAG00000010924	sarnp	99	57.143	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0015958	-	98	61.165	ENSDARG00000059357	sarnp	99	62.136	Danio_rerio
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSDNOG00000014518	SARNP	100	95.714	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0015958	-	100	96.190	ENSDORG00000001065	-	100	96.190	Dipodomys_ordii
MGP_CAROLIEiJ_G0015958	-	99	52.315	ENSEBUG00000016080	sarnp	98	52.315	Eptatretus_burgeri
MGP_CAROLIEiJ_G0015958	-	100	97.143	ENSECAG00000000708	SARNP	100	97.143	Equus_caballus
MGP_CAROLIEiJ_G0015958	-	98	58.879	ENSELUG00000020983	sarnp	99	58.962	Esox_lucius
MGP_CAROLIEiJ_G0015958	-	98	55.405	ENSELUG00000006786	HCC1	98	55.405	Esox_lucius
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSFCAG00000037076	SARNP	100	95.714	Felis_catus
MGP_CAROLIEiJ_G0015958	-	90	76.064	ENSFALG00000000679	SARNP	73	76.064	Ficedula_albicollis
MGP_CAROLIEiJ_G0015958	-	100	96.667	ENSFDAG00000007766	SARNP	100	96.667	Fukomys_damarensis
MGP_CAROLIEiJ_G0015958	-	98	55.760	ENSFHEG00000012192	sarnp	99	56.682	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0015958	-	98	53.589	ENSGMOG00000011467	sarnp	98	53.589	Gadus_morhua
MGP_CAROLIEiJ_G0015958	-	99	84.689	ENSGALG00000030342	SARNP	99	84.689	Gallus_gallus
MGP_CAROLIEiJ_G0015958	-	98	56.221	ENSGAFG00000019183	sarnp	99	57.143	Gambusia_affinis
MGP_CAROLIEiJ_G0015958	-	98	54.338	ENSGACG00000011615	sarnp	99	54.839	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSGGOG00000013217	SARNP	100	95.714	Gorilla_gorilla
MGP_CAROLIEiJ_G0015958	-	100	80.000	ENSGGOG00000041309	-	100	82.381	Gorilla_gorilla
MGP_CAROLIEiJ_G0015958	-	98	58.333	ENSHBUG00000008761	sarnp	99	58.333	Haplochromis_burtoni
MGP_CAROLIEiJ_G0015958	-	100	97.143	ENSHGLG00000016869	SARNP	100	97.143	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0015958	-	100	97.143	ENSHGLG00100014657	SARNP	100	97.143	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0015958	-	99	53.488	ENSHCOG00000015510	sarnp	99	54.673	Hippocampus_comes
MGP_CAROLIEiJ_G0015958	-	98	58.654	ENSIPUG00000012503	Sarnp	99	60.766	Ictalurus_punctatus
MGP_CAROLIEiJ_G0015958	-	100	97.143	ENSSTOG00000000283	SARNP	100	97.143	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0015958	-	92	82.383	ENSJJAG00000011057	-	90	82.383	Jaculus_jaculus
MGP_CAROLIEiJ_G0015958	-	100	90.952	ENSJJAG00000001070	-	100	90.952	Jaculus_jaculus
MGP_CAROLIEiJ_G0015958	-	98	57.078	ENSKMAG00000013400	sarnp	99	57.798	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0015958	-	98	54.930	ENSLBEG00000025038	sarnp	99	56.881	Labrus_bergylta
MGP_CAROLIEiJ_G0015958	-	85	43.478	ENSLACG00000014810	-	96	44.565	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015958	-	95	68.342	ENSLACG00000018719	SARNP	88	70.352	Latimeria_chalumnae
MGP_CAROLIEiJ_G0015958	-	98	65.258	ENSLOCG00000003621	sarnp	98	65.728	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0015958	-	100	97.143	ENSLAFG00000015053	SARNP	100	97.143	Loxodonta_africana
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSMFAG00000045270	SARNP	100	95.714	Macaca_fascicularis
MGP_CAROLIEiJ_G0015958	-	100	89.048	ENSMFAG00000032419	-	98	89.048	Macaca_fascicularis
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSMMUG00000006289	-	100	95.714	Macaca_mulatta
MGP_CAROLIEiJ_G0015958	-	100	89.048	ENSMMUG00000037731	-	100	89.048	Macaca_mulatta
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSMNEG00000044633	-	100	95.714	Macaca_nemestrina
MGP_CAROLIEiJ_G0015958	-	99	87.981	ENSMNEG00000041520	-	97	88.670	Macaca_nemestrina
MGP_CAROLIEiJ_G0015958	-	100	77.619	ENSMNEG00000030688	-	98	77.619	Macaca_nemestrina
MGP_CAROLIEiJ_G0015958	-	100	85.714	ENSMLEG00000037790	-	98	85.714	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015958	-	67	92.143	ENSMLEG00000038545	-	86	92.143	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0015958	-	98	58.019	ENSMAMG00000005942	sarnp	99	58.019	Mastacembelus_armatus
MGP_CAROLIEiJ_G0015958	-	98	58.333	ENSMZEG00005023533	sarnp	99	58.333	Maylandia_zebra
MGP_CAROLIEiJ_G0015958	-	99	84.689	ENSMGAG00000001807	SARNP	99	84.689	Meleagris_gallopavo
MGP_CAROLIEiJ_G0015958	-	100	97.143	ENSMAUG00000005256	-	100	97.143	Mesocricetus_auratus
MGP_CAROLIEiJ_G0015958	-	100	96.190	ENSMICG00000010902	-	100	96.190	Microcebus_murinus
MGP_CAROLIEiJ_G0015958	-	100	98.571	ENSMOCG00000006502	-	100	98.571	Microtus_ochrogaster
MGP_CAROLIEiJ_G0015958	-	99	55.714	ENSMMOG00000013258	sarnp	99	55.714	Mola_mola
MGP_CAROLIEiJ_G0015958	-	90	56.477	ENSMALG00000009106	sarnp	83	56.477	Monopterus_albus
MGP_CAROLIEiJ_G0015958	-	100	100.000	ENSMUSG00000078427	Sarnp	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0015958	-	94	98.985	MGP_PahariEiJ_G0031126	-	100	98.985	Mus_pahari
MGP_CAROLIEiJ_G0015958	-	100	100.000	MGP_SPRETEiJ_G0016783	-	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0015958	-	100	96.667	ENSMPUG00000000885	SARNP	100	96.667	Mustela_putorius_furo
MGP_CAROLIEiJ_G0015958	-	80	91.018	ENSMLUG00000003565	SARNP	100	91.018	Myotis_lucifugus
MGP_CAROLIEiJ_G0015958	-	100	96.190	ENSNGAG00000010245	-	100	96.190	Nannospalax_galili
MGP_CAROLIEiJ_G0015958	-	87	90.710	ENSNLEG00000017599	-	99	90.710	Nomascus_leucogenys
MGP_CAROLIEiJ_G0015958	-	100	85.238	ENSMEUG00000014879	SARNP	100	85.238	Notamacropus_eugenii
MGP_CAROLIEiJ_G0015958	-	100	74.762	ENSOPRG00000007733	SARNP	100	74.762	Ochotona_princeps
MGP_CAROLIEiJ_G0015958	-	100	78.095	ENSODEG00000012047	-	100	80.000	Octodon_degus
MGP_CAROLIEiJ_G0015958	-	100	96.667	ENSODEG00000004608	-	100	96.667	Octodon_degus
MGP_CAROLIEiJ_G0015958	-	98	58.796	ENSONIG00000016523	sarnp	99	58.796	Oreochromis_niloticus
MGP_CAROLIEiJ_G0015958	-	95	85.222	ENSOANG00000002882	SARNP	100	85.222	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0015958	-	98	93.720	ENSOCUG00000010117	SARNP	99	93.720	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0015958	-	98	59.809	ENSORLG00000029565	sarnp	88	59.809	Oryzias_latipes
MGP_CAROLIEiJ_G0015958	-	98	59.809	ENSORLG00015021649	sarnp	88	59.809	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0015958	-	98	59.330	ENSOMEG00000014699	sarnp	99	59.330	Oryzias_melastigma
MGP_CAROLIEiJ_G0015958	-	75	93.631	ENSOGAG00000001693	SARNP	94	93.631	Otolemur_garnettii
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSOARG00000011218	SARNP	100	95.714	Ovis_aries
MGP_CAROLIEiJ_G0015958	-	100	76.190	ENSPPAG00000042587	-	98	78.571	Pan_paniscus
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSPPAG00000039513	SARNP	100	95.714	Pan_paniscus
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSPPRG00000020704	SARNP	100	95.714	Panthera_pardus
MGP_CAROLIEiJ_G0015958	-	100	76.190	ENSPTRG00000046696	-	98	78.571	Pan_troglodytes
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSPTRG00000029747	SARNP	100	95.714	Pan_troglodytes
MGP_CAROLIEiJ_G0015958	-	100	95.238	ENSPANG00000013149	-	100	95.238	Papio_anubis
MGP_CAROLIEiJ_G0015958	-	100	87.143	ENSPANG00000006001	-	98	87.143	Papio_anubis
MGP_CAROLIEiJ_G0015958	-	98	61.792	ENSPKIG00000002212	sarnp	99	60.829	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0015958	-	99	82.609	ENSPSIG00000002998	SARNP	98	83.415	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0015958	-	100	98.095	ENSPEMG00000000923	-	100	98.095	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0015958	-	98	50.233	ENSPMAG00000009808	sarnp	95	51.131	Petromyzon_marinus
MGP_CAROLIEiJ_G0015958	-	95	92.965	ENSPCIG00000024663	SARNP	99	92.965	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0015958	-	98	56.682	ENSPFOG00000013517	sarnp	99	58.257	Poecilia_formosa
MGP_CAROLIEiJ_G0015958	-	98	56.019	ENSPLAG00000017096	sarnp	99	58.525	Poecilia_latipinna
MGP_CAROLIEiJ_G0015958	-	98	56.019	ENSPMEG00000014306	sarnp	99	58.525	Poecilia_mexicana
MGP_CAROLIEiJ_G0015958	-	97	50.000	ENSPREG00000019598	sarnp	82	50.000	Poecilia_reticulata
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSPPYG00000004630	SARNP	100	95.714	Pongo_abelii
MGP_CAROLIEiJ_G0015958	-	98	59.330	ENSPNAG00000000975	sarnp	99	59.330	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0015958	-	100	98.571	ENSRNOG00000030520	Sarnp	100	98.571	Rattus_norvegicus
MGP_CAROLIEiJ_G0015958	-	100	84.977	ENSRBIG00000026928	-	98	85.446	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015958	-	100	72.381	ENSRBIG00000037388	-	98	73.333	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015958	-	95	93.467	ENSRBIG00000019503	-	96	93.467	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015958	-	100	95.238	ENSRBIG00000039295	-	100	95.238	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0015958	-	100	95.238	ENSRROG00000035177	-	100	95.238	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015958	-	100	84.977	ENSRROG00000044575	-	98	85.446	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0015958	-	100	95.714	ENSSBOG00000035337	-	100	95.714	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015958	-	100	91.905	ENSSBOG00000028635	-	98	91.905	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015958	-	100	78.095	ENSSBOG00000022787	-	97	78.095	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0015958	-	100	93.810	ENSSHAG00000008865	SARNP	100	93.810	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0015958	-	98	56.277	ENSSFOG00015020709	sarnp	99	63.014	Scleropages_formosus
MGP_CAROLIEiJ_G0015958	-	98	56.667	ENSSMAG00000018587	sarnp	99	56.667	Scophthalmus_maximus
MGP_CAROLIEiJ_G0015958	-	98	60.952	ENSSDUG00000005484	sarnp	99	60.952	Seriola_dumerili
MGP_CAROLIEiJ_G0015958	-	98	60.952	ENSSLDG00000003775	sarnp	99	60.952	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0015958	-	100	68.095	ENSSARG00000004858	SARNP	100	68.095	Sorex_araneus
MGP_CAROLIEiJ_G0015958	-	95	65.842	ENSSPUG00000015135	SARNP	96	65.842	Sphenodon_punctatus
MGP_CAROLIEiJ_G0015958	-	100	96.190	ENSSSCG00000000364	SARNP	100	96.190	Sus_scrofa
MGP_CAROLIEiJ_G0015958	-	94	76.142	ENSTGUG00000016126	SARNP	100	76.142	Taeniopygia_guttata
MGP_CAROLIEiJ_G0015958	-	99	54.378	ENSTRUG00000009497	-	99	57.143	Takifugu_rubripes
MGP_CAROLIEiJ_G0015958	-	99	54.630	ENSTNIG00000012432	sarnp	99	54.630	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0015958	-	100	89.524	ENSTTRG00000009735	SARNP	100	89.524	Tursiops_truncatus
MGP_CAROLIEiJ_G0015958	-	79	88.554	ENSUAMG00000015093	-	86	88.554	Ursus_americanus
MGP_CAROLIEiJ_G0015958	-	94	96.447	ENSVPAG00000009515	SARNP	100	96.447	Vicugna_pacos
MGP_CAROLIEiJ_G0015958	-	100	96.190	ENSVVUG00000022779	SARNP	100	96.190	Vulpes_vulpes
MGP_CAROLIEiJ_G0015958	-	99	73.913	ENSXETG00000024657	sarnp	99	73.913	Xenopus_tropicalis
MGP_CAROLIEiJ_G0015958	-	98	56.682	ENSXMAG00000009356	sarnp	99	57.604	Xiphophorus_maculatus