EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0016069 (Gene tree)
Gene ID
110304653
Gene Symbol
Ddx56
Alias
2600001H07Rik|D11Ertd619e|NOH61
Full Name
DEAD-box helicase 56
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
9274 bases
Position
chr11:3115897-3125170
Accession
110304653
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0025589ResIIIPF04851.151e-0611
MGP_CAROLIEiJ_P0025589DEADPF00270.295.9e-4011
MGP_CAROLIEiJ_P0025591DEADPF00270.295e-3311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0025592-621--- (aa)--
MGP_CAROLIEiJ_T0025591-764-MGP_CAROLIEiJ_P0025591237 (aa)--
MGP_CAROLIEiJ_T0025590-531--- (aa)--
MGP_CAROLIEiJ_T0025589-1957XM_021176105MGP_CAROLIEiJ_P0025589546 (aa)XP_021031764UPI000A318A01
Gene Model
Click here to download MGP_CAROLIEiJ_G0016069's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0016069's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0016069Ddx569230.137MGP_CAROLIEiJ_G0017495-5930.137
MGP_CAROLIEiJ_G0016069Ddx568034.450MGP_CAROLIEiJ_G0016888Ddx526131.343
MGP_CAROLIEiJ_G0016069Ddx566630.789MGP_CAROLIEiJ_G0015028D1Pas15230.159
MGP_CAROLIEiJ_G0016069Ddx569935.887MGP_CAROLIEiJ_G0028986Ddx478638.889
MGP_CAROLIEiJ_G0016069Ddx569532.258MGP_CAROLIEiJ_G0031567Ddx19a7330.424
MGP_CAROLIEiJ_G0016069Ddx569833.468MGP_CAROLIEiJ_G0024700Ddx275331.250
MGP_CAROLIEiJ_G0016069Ddx569532.258MGP_CAROLIEiJ_G0031568Ddx19b7330.402
MGP_CAROLIEiJ_G0016069Ddx568250.000MGP_CAROLIEiJ_G0017622Ddx15350.847
MGP_CAROLIEiJ_G0016069Ddx565131.852MGP_CAROLIEiJ_G0021519-7234.752
MGP_CAROLIEiJ_G0016069Ddx566132.692MGP_CAROLIEiJ_G0031277Ddx397435.583
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0016069Ddx5610090.859ENSG00000136271DDX5610094.054Homo_sapiens
MGP_CAROLIEiJ_G0016069Ddx569866.935ENSAPOG00000017113ddx569864.205Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0016069Ddx5610087.363ENSAMEG00000017711DDX5610087.363Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0016069Ddx569258.974ENSACIG00000013747ddx569867.403Amphilophus_citrinellus
MGP_CAROLIEiJ_G0016069Ddx569665.984ENSAOCG00000015447-8765.503Amphiprion_ocellaris
MGP_CAROLIEiJ_G0016069Ddx569665.984ENSAOCG00000018059ddx569365.600Amphiprion_ocellaris
MGP_CAROLIEiJ_G0016069Ddx569963.082ENSAPEG00000007267ddx569963.082Amphiprion_percula
MGP_CAROLIEiJ_G0016069Ddx569866.532ENSATEG00000005279ddx569863.455Anabas_testudineus
MGP_CAROLIEiJ_G0016069Ddx569866.667ENSACLG00000020113ddx569863.834Astatotilapia_calliptera
MGP_CAROLIEiJ_G0016069Ddx569764.919ENSAMXG00000019357ddx569960.360Astyanax_mexicanus
MGP_CAROLIEiJ_G0016069Ddx5610089.560ENSBTAG00000010602DDX5610089.560Bos_taurus
MGP_CAROLIEiJ_G0016069Ddx569641.081WBGene00016073C24H12.48641.081Caenorhabditis_elegans
MGP_CAROLIEiJ_G0016069Ddx5610090.311ENSCJAG00000012233DDX5610090.311Callithrix_jacchus
MGP_CAROLIEiJ_G0016069Ddx568286.099ENSCAFG00000029295DDX5610086.099Canis_familiaris
MGP_CAROLIEiJ_G0016069Ddx5610083.700ENSCAFG00020019695DDX5610083.700Canis_lupus_dingo
MGP_CAROLIEiJ_G0016069Ddx5610089.560ENSCHIG00000014261DDX5610089.560Capra_hircus
MGP_CAROLIEiJ_G0016069Ddx5610089.397ENSTSYG00000008048DDX5610089.945Carlito_syrichta
MGP_CAROLIEiJ_G0016069Ddx568687.104ENSCAPG00000006286DDX5610087.104Cavia_aperea
MGP_CAROLIEiJ_G0016069Ddx5610087.569ENSCPOG00000003359DDX5610087.569Cavia_porcellus
MGP_CAROLIEiJ_G0016069Ddx5610089.762ENSCCAG00000025303DDX5610090.311Cebus_capucinus
MGP_CAROLIEiJ_G0016069Ddx5610090.659ENSCATG00000039389DDX5610090.659Cercocebus_atys
MGP_CAROLIEiJ_G0016069Ddx5610089.011ENSCLAG00000007666DDX5610089.011Chinchilla_lanigera
MGP_CAROLIEiJ_G0016069Ddx5610090.676ENSCSAG00000015636DDX5610090.676Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0016069Ddx569868.124ENSCPBG00000024556DDX569868.124Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0016069Ddx569854.545ENSCING00000005185-9855.796Ciona_intestinalis
MGP_CAROLIEiJ_G0016069Ddx569954.472ENSCSAVG00000011266-9954.059Ciona_savignyi
MGP_CAROLIEiJ_G0016069Ddx5610090.494ENSCANG00000028187DDX5610090.494Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0016069Ddx5610093.223ENSCGRG00001019019Ddx5610093.223Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0016069Ddx5610093.223ENSCGRG00000011870Ddx5610093.223Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0016069Ddx569868.145ENSCSEG00000008368ddx569963.620Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0016069Ddx569868.145ENSCVAG00000006499ddx569963.653Cyprinodon_variegatus
MGP_CAROLIEiJ_G0016069Ddx569964.940ENSDARG00000020913ddx569963.327Danio_rerio
MGP_CAROLIEiJ_G0016069Ddx568686.441ENSDNOG00000036526DDX569986.441Dasypus_novemcinctus
MGP_CAROLIEiJ_G0016069Ddx567085.326ENSDORG00000026173-10094.054Dipodomys_ordii
MGP_CAROLIEiJ_G0016069Ddx569848.000FBgn0001565Hlc9049.803Drosophila_melanogaster
MGP_CAROLIEiJ_G0016069Ddx569472.199ENSETEG00000002969-8378.325Echinops_telfairi
MGP_CAROLIEiJ_G0016069Ddx568759.368ENSETEG00000019559-10058.526Echinops_telfairi
MGP_CAROLIEiJ_G0016069Ddx5610058.498ENSEBUG00000009986ddx569958.198Eptatretus_burgeri
MGP_CAROLIEiJ_G0016069Ddx5610089.744ENSEASG00005017795DDX5610089.744Equus_asinus_asinus
MGP_CAROLIEiJ_G0016069Ddx5610089.560ENSECAG00000019897DDX5610089.560Equus_caballus
MGP_CAROLIEiJ_G0016069Ddx568688.347ENSEEUG00000004849DDX5610088.347Erinaceus_europaeus
MGP_CAROLIEiJ_G0016069Ddx569767.073ENSELUG00000004150ddx569765.867Esox_lucius
MGP_CAROLIEiJ_G0016069Ddx569987.156ENSFCAG00000010261DDX569987.339Felis_catus
MGP_CAROLIEiJ_G0016069Ddx5610088.828ENSFDAG00000007128DDX5610088.828Fukomys_damarensis
MGP_CAROLIEiJ_G0016069Ddx569768.293ENSFHEG00000018008ddx569567.273Fundulus_heteroclitus
MGP_CAROLIEiJ_G0016069Ddx569867.339ENSGAFG00000006906ddx569860.846Gambusia_affinis
MGP_CAROLIEiJ_G0016069Ddx569470.760ENSGAGG00000006789DDX569170.760Gopherus_agassizii
MGP_CAROLIEiJ_G0016069Ddx5610090.859ENSGGOG00000012031DDX5610090.859Gorilla_gorilla
MGP_CAROLIEiJ_G0016069Ddx569866.667ENSHBUG00000015246ddx569361.538Haplochromis_burtoni
MGP_CAROLIEiJ_G0016069Ddx5610089.194ENSHGLG00000017271DDX5610089.194Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0016069Ddx5610089.194ENSHGLG00100015731DDX5610089.194Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016069Ddx569867.742ENSHCOG00000001685ddx569763.168Hippocampus_comes
MGP_CAROLIEiJ_G0016069Ddx569964.542ENSIPUG00000006602ddx569861.388Ictalurus_punctatus
MGP_CAROLIEiJ_G0016069Ddx5610088.645ENSSTOG00000000464DDX5610088.645Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0016069Ddx569989.483ENSJJAG00000014269Ddx5610089.483Jaculus_jaculus
MGP_CAROLIEiJ_G0016069Ddx569767.480ENSKMAG00000016611ddx569863.784Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0016069Ddx569666.803ENSLBEG00000026281ddx569862.477Labrus_bergylta
MGP_CAROLIEiJ_G0016069Ddx569866.055ENSLACG00000015551DDX569766.365Latimeria_chalumnae
MGP_CAROLIEiJ_G0016069Ddx569768.421ENSLOCG00000015185ddx569963.458Lepisosteus_oculatus
MGP_CAROLIEiJ_G0016069Ddx569987.823ENSLAFG00000018206DDX569987.823Loxodonta_africana
MGP_CAROLIEiJ_G0016069Ddx5610090.842ENSMFAG00000041001DDX5610090.842Macaca_fascicularis
MGP_CAROLIEiJ_G0016069Ddx5610090.659ENSMMUG00000002645DDX5610090.659Macaca_mulatta
MGP_CAROLIEiJ_G0016069Ddx5610091.026ENSMNEG00000028492DDX5610091.026Macaca_nemestrina
MGP_CAROLIEiJ_G0016069Ddx5610090.659ENSMLEG00000043591DDX5610090.659Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0016069Ddx569667.623ENSMAMG00000007776ddx569864.117Mastacembelus_armatus
MGP_CAROLIEiJ_G0016069Ddx569866.667ENSMZEG00005009813ddx569863.834Maylandia_zebra
MGP_CAROLIEiJ_G0016069Ddx5610090.859ENSMICG00000005550DDX5610090.859Microcebus_murinus
MGP_CAROLIEiJ_G0016069Ddx5610094.139ENSMOCG00000016782Ddx5610094.139Microtus_ochrogaster
MGP_CAROLIEiJ_G0016069Ddx569766.667ENSMMOG00000009654ddx569665.759Mola_mola
MGP_CAROLIEiJ_G0016069Ddx5610073.960ENSMODG00000016137DDX5610073.960Monodelphis_domestica
MGP_CAROLIEiJ_G0016069Ddx569866.534ENSMALG00000016910ddx569963.539Monopterus_albus
MGP_CAROLIEiJ_G0016069Ddx5610099.156ENSMUSG00000004393Ddx5610099.156Mus_musculus
MGP_CAROLIEiJ_G0016069Ddx5610097.436MGP_PahariEiJ_G0016822Ddx5610097.881Mus_pahari
MGP_CAROLIEiJ_G0016069Ddx5610099.156MGP_SPRETEiJ_G0016911Ddx5610099.156Mus_spretus
MGP_CAROLIEiJ_G0016069Ddx5610086.081ENSMPUG00000018196DDX568886.081Mustela_putorius_furo
MGP_CAROLIEiJ_G0016069Ddx5610089.927ENSMLUG00000003509DDX5610090.110Myotis_lucifugus
MGP_CAROLIEiJ_G0016069Ddx5610090.110ENSNGAG00000018785Ddx5610090.110Nannospalax_galili
MGP_CAROLIEiJ_G0016069Ddx569866.667ENSNBRG00000002656ddx569363.353Neolamprologus_brichardi
MGP_CAROLIEiJ_G0016069Ddx5610091.225ENSNLEG00000003816DDX5610091.225Nomascus_leucogenys
MGP_CAROLIEiJ_G0016069Ddx569679.184ENSMEUG00000006788DDX5610076.411Notamacropus_eugenii
MGP_CAROLIEiJ_G0016069Ddx5610087.569ENSOPRG00000000292-10087.569Ochotona_princeps
MGP_CAROLIEiJ_G0016069Ddx569686.531ENSODEG00000014807DDX5610092.000Octodon_degus
MGP_CAROLIEiJ_G0016069Ddx569866.667ENSONIG00000011509ddx569865.299Oreochromis_niloticus
MGP_CAROLIEiJ_G0016069Ddx569567.078ENSOANG00000015987-9569.363Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0016069Ddx568880.531ENSOANG00000006320-10069.606Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0016069Ddx5610087.569ENSOCUG00000022918DDX5610088.300Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0016069Ddx569866.532ENSORLG00000001434ddx569964.195Oryzias_latipes
MGP_CAROLIEiJ_G0016069Ddx569866.532ENSORLG00020015718ddx569564.376Oryzias_latipes_hni
MGP_CAROLIEiJ_G0016069Ddx569866.532ENSORLG00015003004ddx569564.195Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0016069Ddx569866.532ENSOMEG00000022072ddx569864.791Oryzias_melastigma
MGP_CAROLIEiJ_G0016069Ddx5610089.031ENSOGAG00000009981DDX5610089.031Otolemur_garnettii
MGP_CAROLIEiJ_G0016069Ddx5610089.560ENSOARG00000015240DDX5610089.560Ovis_aries
MGP_CAROLIEiJ_G0016069Ddx5610086.871ENSPPAG00000029147DDX5610086.871Pan_paniscus
MGP_CAROLIEiJ_G0016069Ddx5610073.588ENSPPAG00000031263-10073.406Pan_paniscus
MGP_CAROLIEiJ_G0016069Ddx569985.897ENSPPRG00000014594DDX569986.630Panthera_pardus
MGP_CAROLIEiJ_G0016069Ddx569677.714ENSPTIG00000019500DDX569977.905Panthera_tigris_altaica
MGP_CAROLIEiJ_G0016069Ddx569475.483ENSPTRG00000052765-10075.290Pan_troglodytes
MGP_CAROLIEiJ_G0016069Ddx5610090.494ENSPTRG00000019147DDX5610090.494Pan_troglodytes
MGP_CAROLIEiJ_G0016069Ddx5610090.842ENSPANG00000002446DDX5610090.842Papio_anubis
MGP_CAROLIEiJ_G0016069Ddx569865.863ENSPKIG00000018998ddx569864.493Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0016069Ddx569865.863ENSPMGG00000017421ddx569665.830Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0016069Ddx569695.154ENSPEMG00000018351-9695.154Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0016069Ddx5610082.065ENSPCIG00000009336DDX5610082.065Phascolarctos_cinereus
MGP_CAROLIEiJ_G0016069Ddx569867.742ENSPFOG00000018658ddx569963.110Poecilia_formosa
MGP_CAROLIEiJ_G0016069Ddx569867.742ENSPLAG00000019208ddx569963.110Poecilia_latipinna
MGP_CAROLIEiJ_G0016069Ddx569867.742ENSPMEG00000001775ddx569963.110Poecilia_mexicana
MGP_CAROLIEiJ_G0016069Ddx569867.339ENSPREG00000015142ddx569963.291Poecilia_reticulata
MGP_CAROLIEiJ_G0016069Ddx5610091.225ENSPPYG00000017591DDX5610091.225Pongo_abelii
MGP_CAROLIEiJ_G0016069Ddx569686.338ENSPCAG00000011499DDX5610086.338Procavia_capensis
MGP_CAROLIEiJ_G0016069Ddx5610090.494ENSPCOG00000024864DDX5610090.494Propithecus_coquereli
MGP_CAROLIEiJ_G0016069Ddx568891.163ENSPVAG00000000791DDX568891.163Pteropus_vampyrus
MGP_CAROLIEiJ_G0016069Ddx569866.265ENSPNYG00000019212ddx569863.653Pundamilia_nyererei
MGP_CAROLIEiJ_G0016069Ddx569865.863ENSPNAG00000025446ddx569963.197Pygocentrus_nattereri
MGP_CAROLIEiJ_G0016069Ddx5610096.154ENSRNOG00000004670Ddx5610096.154Rattus_norvegicus
MGP_CAROLIEiJ_G0016069Ddx5610090.676ENSRBIG00000030140DDX5610090.676Rhinopithecus_bieti
MGP_CAROLIEiJ_G0016069Ddx5610090.311ENSRROG00000044428DDX5610090.311Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0016069Ddx569742.735YLR276C-9842.906Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0016069Ddx5610090.128ENSSBOG00000034339DDX5610090.128Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0016069Ddx568682.030ENSSHAG00000016615DDX569982.030Sarcophilus_harrisii
MGP_CAROLIEiJ_G0016069Ddx569864.964ENSSFOG00015012795ddx569764.964Scleropages_formosus
MGP_CAROLIEiJ_G0016069Ddx569867.339ENSSMAG00000011280ddx569963.685Scophthalmus_maximus
MGP_CAROLIEiJ_G0016069Ddx569867.339ENSSDUG00000023597ddx569862.883Seriola_dumerili
MGP_CAROLIEiJ_G0016069Ddx569867.339ENSSLDG00000018369ddx569862.883Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0016069Ddx567586.819ENSSARG00000014363DDX567985.596Sorex_araneus
MGP_CAROLIEiJ_G0016069Ddx569965.996ENSSPUG00000000784DDX569665.996Sphenodon_punctatus
MGP_CAROLIEiJ_G0016069Ddx569866.129ENSSPAG00000009392ddx569566.344Stegastes_partitus
MGP_CAROLIEiJ_G0016069Ddx5610088.869ENSSSCG00000016745DDX5610088.869Sus_scrofa
MGP_CAROLIEiJ_G0016069Ddx569866.129ENSTRUG00000018623ddx569962.799Takifugu_rubripes
MGP_CAROLIEiJ_G0016069Ddx569866.532ENSTNIG00000013593ddx569861.717Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0016069Ddx5610088.095ENSTBEG00000007119DDX5610088.095Tupaia_belangeri
MGP_CAROLIEiJ_G0016069Ddx568687.924ENSTTRG00000010552DDX5610087.924Tursiops_truncatus
MGP_CAROLIEiJ_G0016069Ddx5610087.729ENSUAMG00000014194DDX5610087.729Ursus_americanus
MGP_CAROLIEiJ_G0016069Ddx5610087.729ENSUMAG00000009666DDX5610087.729Ursus_maritimus
MGP_CAROLIEiJ_G0016069Ddx5610085.897ENSVVUG00000011905DDX5610085.897Vulpes_vulpes
MGP_CAROLIEiJ_G0016069Ddx569964.260ENSXETG00000019000ddx569965.343Xenopus_tropicalis
MGP_CAROLIEiJ_G0016069Ddx569867.339ENSXCOG00000017413ddx569862.268Xiphophorus_couchianus
MGP_CAROLIEiJ_G0016069Ddx569867.339ENSXMAG00000018749ddx569962.500Xiphophorus_maculatus

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