EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0016153 (Gene tree)
Gene ID
110304831
Gene Symbol
Pnpt1
Alias
1200003F12Rik|PNPase|polynucleotide phosphorylase
Full Name
polyribonucleotide nucleotidyltransferase 1
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
32120 bases
Position
chr11:24782457-24814576
Accession
110304831
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0025959KH_1PF00013.293.9e-0711
MGP_CAROLIEiJ_P0025959RNase_PHPF01138.213.9e-3912
MGP_CAROLIEiJ_P0025959RNase_PHPF01138.213.9e-3922
MGP_CAROLIEiJ_P0025959PNPasePF03726.143e-0711
MGP_CAROLIEiJ_P0025959S1PF00575.236.6e-0611
MGP_CAROLIEiJ_P0025959RNase_PH_CPF03725.152.5e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0025960-587--- (aa)--
MGP_CAROLIEiJ_T0025957-3335--- (aa)--
MGP_CAROLIEiJ_T0025959-2711XM_021176449MGP_CAROLIEiJ_P0025959784 (aa)XP_021032108UPI000A3177BD
MGP_CAROLIEiJ_T0025958-459--- (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0016153's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0016153's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0016153Pnpt19991.944ENSG00000138035PNPT19892.288Homo_sapiens
MGP_CAROLIEiJ_G0016153Pnpt19476.779ENSAPOG00000005581PNPT19976.446Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0016153Pnpt19991.214ENSAMEG00000003772PNPT19891.634Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0016153Pnpt19277.839ENSACIG00000010140PNPT19977.839Amphilophus_citrinellus
MGP_CAROLIEiJ_G0016153Pnpt19676.548ENSAOCG00000020109PNPT19976.178Amphiprion_ocellaris
MGP_CAROLIEiJ_G0016153Pnpt19475.881ENSAPEG00000002299PNPT19975.881Amphiprion_percula
MGP_CAROLIEiJ_G0016153Pnpt19378.875ENSATEG00000011164PNPT19578.875Anabas_testudineus
MGP_CAROLIEiJ_G0016153Pnpt19381.088ENSAPLG00000002885PNPT110080.978Anas_platyrhynchos
MGP_CAROLIEiJ_G0016153Pnpt19978.310ENSACAG00000003692PNPT19680.313Anolis_carolinensis
MGP_CAROLIEiJ_G0016153Pnpt19991.742ENSANAG00000023709PNPT19892.026Aotus_nancymaae
MGP_CAROLIEiJ_G0016153Pnpt19676.812ENSACLG00000024267PNPT19976.812Astatotilapia_calliptera
MGP_CAROLIEiJ_G0016153Pnpt19178.255ENSAMXG00000042321PNPT19978.255Astyanax_mexicanus
MGP_CAROLIEiJ_G0016153Pnpt19990.427ENSBTAG00000008909PNPT19890.470Bos_taurus
MGP_CAROLIEiJ_G0016153Pnpt19141.413WBGene00015266BE0003N10.19641.413Caenorhabditis_elegans
MGP_CAROLIEiJ_G0016153Pnpt19992.000ENSCJAG00000009740PNPT19892.157Callithrix_jacchus
MGP_CAROLIEiJ_G0016153Pnpt19986.410ENSCAFG00000002891PNPT19886.511Canis_familiaris
MGP_CAROLIEiJ_G0016153Pnpt19991.850ENSCAFG00020026841PNPT19792.016Canis_lupus_dingo
MGP_CAROLIEiJ_G0016153Pnpt19986.546ENSCHIG00000025034PNPT19886.441Capra_hircus
MGP_CAROLIEiJ_G0016153Pnpt19991.097ENSTSYG00000006536PNPT19891.134Carlito_syrichta
MGP_CAROLIEiJ_G0016153Pnpt19171.330ENSCAPG00000013300PNPT19971.370Cavia_aperea
MGP_CAROLIEiJ_G0016153Pnpt19989.935ENSCPOG00000011008PNPT19889.831Cavia_porcellus
MGP_CAROLIEiJ_G0016153Pnpt19991.097ENSCCAG00000037909PNPT19891.503Cebus_capucinus
MGP_CAROLIEiJ_G0016153Pnpt19990.409ENSCATG00000031551PNPT19890.850Cercocebus_atys
MGP_CAROLIEiJ_G0016153Pnpt19968.564ENSCATG00000036442-9768.717Cercocebus_atys
MGP_CAROLIEiJ_G0016153Pnpt19990.710ENSCLAG00000006240PNPT19890.743Chinchilla_lanigera
MGP_CAROLIEiJ_G0016153Pnpt19991.699ENSCSAG00000014324PNPT19892.167Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0016153Pnpt19380.137ENSCHOG00000007360PNPT110080.137Choloepus_hoffmanni
MGP_CAROLIEiJ_G0016153Pnpt19979.925ENSCPBG00000020856PNPT19582.563Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0016153Pnpt19991.304ENSCANG00000034019PNPT19891.765Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0016153Pnpt19971.134ENSCANG00000028159-9871.429Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0016153Pnpt110092.785ENSCGRG00001012245Pnpt19793.995Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0016153Pnpt110093.367ENSCGRG00000007624Pnpt19893.872Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0016153Pnpt19174.543ENSCSEG00000000809PNPT19974.543Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0016153Pnpt17780.435ENSCVAG00000010037PNPT19680.435Cyprinodon_variegatus
MGP_CAROLIEiJ_G0016153Pnpt110090.051ENSDNOG00000046753PNPT19890.104Dasypus_novemcinctus
MGP_CAROLIEiJ_G0016153Pnpt19991.332ENSDORG00000011409Pnpt19891.906Dipodomys_ordii
MGP_CAROLIEiJ_G0016153Pnpt19356.386FBgn0039846PNPase9556.386Drosophila_melanogaster
MGP_CAROLIEiJ_G0016153Pnpt110067.006ENSETEG00000001582-9867.100Echinops_telfairi
MGP_CAROLIEiJ_G0016153Pnpt19154.722ENSEBUG00000010305PNPT19454.722Eptatretus_burgeri
MGP_CAROLIEiJ_G0016153Pnpt19992.109ENSEASG00005001974PNPT19891.917Equus_asinus_asinus
MGP_CAROLIEiJ_G0016153Pnpt19992.238ENSECAG00000020058PNPT19893.380Equus_caballus
MGP_CAROLIEiJ_G0016153Pnpt19980.928ENSEEUG00000015610PNPT19781.356Erinaceus_europaeus
MGP_CAROLIEiJ_G0016153Pnpt19576.800ENSELUG00000004795PNPT19876.627Esox_lucius
MGP_CAROLIEiJ_G0016153Pnpt19991.721ENSFCAG00000013236PNPT19891.656Felis_catus
MGP_CAROLIEiJ_G0016153Pnpt19380.468ENSFALG00000011214PNPT110080.357Ficedula_albicollis
MGP_CAROLIEiJ_G0016153Pnpt19990.281ENSFDAG00000017446PNPT19890.470Fukomys_damarensis
MGP_CAROLIEiJ_G0016153Pnpt19775.686ENSFHEG00000006495PNPT19878.008Fundulus_heteroclitus
MGP_CAROLIEiJ_G0016153Pnpt19474.459ENSGMOG00000006805PNPT19674.560Gadus_morhua
MGP_CAROLIEiJ_G0016153Pnpt19481.165ENSGALG00000043545PNPT19281.165Gallus_gallus
MGP_CAROLIEiJ_G0016153Pnpt19576.393ENSGAFG00000019681PNPT19877.147Gambusia_affinis
MGP_CAROLIEiJ_G0016153Pnpt19675.198ENSGACG00000010840PNPT19875.198Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0016153Pnpt19991.944ENSGGOG00000006867PNPT19892.288Gorilla_gorilla
MGP_CAROLIEiJ_G0016153Pnpt19977.290ENSGGOG00000041496-9877.647Gorilla_gorilla
MGP_CAROLIEiJ_G0016153Pnpt19577.230ENSHBUG00000013041PNPT19777.333Haplochromis_burtoni
MGP_CAROLIEiJ_G0016153Pnpt18982.951ENSHGLG00000010054-9086.728Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0016153Pnpt19990.686ENSHGLG00000007480PNPT19890.482Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0016153Pnpt19990.686ENSHGLG00100010920PNPT19890.482Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016153Pnpt19977.749ENSHGLG00100007397-9680.491Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016153Pnpt19463.908ENSHCOG00000002817PNPT110063.908Hippocampus_comes
MGP_CAROLIEiJ_G0016153Pnpt19377.808ENSIPUG00000014624PNPT19977.808Ictalurus_punctatus
MGP_CAROLIEiJ_G0016153Pnpt19991.188ENSSTOG00000006304PNPT19891.525Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0016153Pnpt110090.944ENSJJAG00000019227Pnpt19891.645Jaculus_jaculus
MGP_CAROLIEiJ_G0016153Pnpt19676.525ENSKMAG00000017389PNPT19876.525Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0016153Pnpt19477.193ENSLBEG00000027692PNPT19876.204Labrus_bergylta
MGP_CAROLIEiJ_G0016153Pnpt18881.069ENSLACG00000011059PNPT19981.069Latimeria_chalumnae
MGP_CAROLIEiJ_G0016153Pnpt19576.769ENSLOCG00000015375PNPT19476.769Lepisosteus_oculatus
MGP_CAROLIEiJ_G0016153Pnpt19983.162ENSLAFG00000021462PNPT19883.117Loxodonta_africana
MGP_CAROLIEiJ_G0016153Pnpt19991.688ENSMFAG00000001927PNPT19892.288Macaca_fascicularis
MGP_CAROLIEiJ_G0016153Pnpt17994.118ENSMMUG00000007003PNPT19994.118Macaca_mulatta
MGP_CAROLIEiJ_G0016153Pnpt19393.407ENSMNEG00000038589PNPT110093.278Macaca_nemestrina
MGP_CAROLIEiJ_G0016153Pnpt19988.747ENSMLEG00000038706PNPT19889.150Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0016153Pnpt19966.624ENSMLEG00000028524-9767.059Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0016153Pnpt19970.356ENSMAMG00000021954PNPT19672.922Mastacembelus_armatus
MGP_CAROLIEiJ_G0016153Pnpt19676.812ENSMZEG00005027363PNPT19976.812Maylandia_zebra
MGP_CAROLIEiJ_G0016153Pnpt19381.011ENSMGAG00000001952PNPT110080.900Meleagris_gallopavo
MGP_CAROLIEiJ_G0016153Pnpt110093.165ENSMAUG00000013652Pnpt19794.386Mesocricetus_auratus
MGP_CAROLIEiJ_G0016153Pnpt19991.443ENSMICG00000009369PNPT19891.656Microcebus_murinus
MGP_CAROLIEiJ_G0016153Pnpt19994.072ENSMOCG00000002820Pnpt19894.163Microtus_ochrogaster
MGP_CAROLIEiJ_G0016153Pnpt19174.274ENSMMOG00000007480PNPT19974.274Mola_mola
MGP_CAROLIEiJ_G0016153Pnpt19982.413ENSMODG00000001984PNPT19683.952Monodelphis_domestica
MGP_CAROLIEiJ_G0016153Pnpt19875.323ENSMALG00000018484PNPT19975.694Monopterus_albus
MGP_CAROLIEiJ_G0016153Pnpt110098.852ENSMUSG00000020464Pnpt110098.852Mus_musculus
MGP_CAROLIEiJ_G0016153Pnpt110098.214MGP_PahariEiJ_G0016737Pnpt110098.214Mus_pahari
MGP_CAROLIEiJ_G0016153Pnpt110099.107MGP_SPRETEiJ_G0016996Pnpt110099.333Mus_spretus
MGP_CAROLIEiJ_G0016153Pnpt19991.355ENSMPUG00000002353PNPT19791.514Mustela_putorius_furo
MGP_CAROLIEiJ_G0016153Pnpt19990.335ENSMLUG00000003886PNPT19890.402Myotis_lucifugus
MGP_CAROLIEiJ_G0016153Pnpt19994.179ENSNGAG00000020856-9893.742Nannospalax_galili
MGP_CAROLIEiJ_G0016153Pnpt17867.869ENSNBRG00000012517PNPT18975.407Neolamprologus_brichardi
MGP_CAROLIEiJ_G0016153Pnpt19988.875ENSNLEG00000009354PNPT19889.281Nomascus_leucogenys
MGP_CAROLIEiJ_G0016153Pnpt19181.601ENSNLEG00000003327-9781.601Nomascus_leucogenys
MGP_CAROLIEiJ_G0016153Pnpt19987.852ENSOPRG00000010232-9887.776Ochotona_princeps
MGP_CAROLIEiJ_G0016153Pnpt19990.581ENSODEG00000012137PNPT19890.743Octodon_degus
MGP_CAROLIEiJ_G0016153Pnpt19975.385ENSONIG00000000983PNPT19876.042Oreochromis_niloticus
MGP_CAROLIEiJ_G0016153Pnpt19085.917ENSOANG00000011178PNPT19985.917Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0016153Pnpt19992.010ENSOCUG00000006889PNPT19892.047Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0016153Pnpt19974.777ENSORLG00000004335PNPT19576.053Oryzias_latipes
MGP_CAROLIEiJ_G0016153Pnpt19974.904ENSORLG00015018951PNPT19978.483Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0016153Pnpt19989.100ENSOGAG00000009840PNPT19889.263Otolemur_garnettii
MGP_CAROLIEiJ_G0016153Pnpt19990.052ENSOARG00000002164PNPT19889.974Ovis_aries
MGP_CAROLIEiJ_G0016153Pnpt19974.330ENSPPAG00000040514-9774.771Pan_paniscus
MGP_CAROLIEiJ_G0016153Pnpt19093.196ENSPPAG00000024705PNPT110093.049Pan_paniscus
MGP_CAROLIEiJ_G0016153Pnpt19992.238ENSPPRG00000001366PNPT19892.177Panthera_pardus
MGP_CAROLIEiJ_G0016153Pnpt19992.367ENSPTIG00000014915PNPT19892.428Panthera_tigris_altaica
MGP_CAROLIEiJ_G0016153Pnpt19991.944ENSPTRG00000011934PNPT19892.288Pan_troglodytes
MGP_CAROLIEiJ_G0016153Pnpt19974.127ENSPTRG00000051411-9974.248Pan_troglodytes
MGP_CAROLIEiJ_G0016153Pnpt19991.944ENSPANG00000022846PNPT19892.418Papio_anubis
MGP_CAROLIEiJ_G0016153Pnpt19973.929ENSPKIG00000021612PNPT19974.793Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0016153Pnpt19880.674ENSPSIG00000013120PNPT19683.085Pelodiscus_sinensis
MGP_CAROLIEiJ_G0016153Pnpt110093.011ENSPEMG00000004284Pnpt19893.515Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0016153Pnpt19273.416ENSPMAG00000008932PNPT19873.416Petromyzon_marinus
MGP_CAROLIEiJ_G0016153Pnpt19983.805ENSPCIG00000010236PNPT19784.444Phascolarctos_cinereus
MGP_CAROLIEiJ_G0016153Pnpt19576.525ENSPFOG00000010229PNPT19876.525Poecilia_formosa
MGP_CAROLIEiJ_G0016153Pnpt19576.658ENSPLAG00000009008PNPT19876.658Poecilia_latipinna
MGP_CAROLIEiJ_G0016153Pnpt19576.525ENSPMEG00000004192PNPT19878.355Poecilia_mexicana
MGP_CAROLIEiJ_G0016153Pnpt19277.335ENSPREG00000003072PNPT110077.335Poecilia_reticulata
MGP_CAROLIEiJ_G0016153Pnpt19991.432ENSPPYG00000012399PNPT19891.765Pongo_abelii
MGP_CAROLIEiJ_G0016153Pnpt19281.137ENSPCAG00000010806PNPT19981.155Procavia_capensis
MGP_CAROLIEiJ_G0016153Pnpt19280.939ENSPCOG00000015664PNPT110080.939Propithecus_coquereli
MGP_CAROLIEiJ_G0016153Pnpt17985.514ENSPVAG00000005379PNPT18776.556Pteropus_vampyrus
MGP_CAROLIEiJ_G0016153Pnpt19376.374ENSPNYG00000000363PNPT19676.374Pundamilia_nyererei
MGP_CAROLIEiJ_G0016153Pnpt19580.107ENSPNAG00000010891PNPT19780.107Pygocentrus_nattereri
MGP_CAROLIEiJ_G0016153Pnpt110096.684ENSRNOG00000003600Pnpt110096.684Rattus_norvegicus
MGP_CAROLIEiJ_G0016153Pnpt19991.432ENSRBIG00000043016PNPT19891.895Rhinopithecus_bieti
MGP_CAROLIEiJ_G0016153Pnpt19991.304ENSRROG00000040537PNPT19891.765Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0016153Pnpt19989.290ENSSBOG00000032574PNPT19993.172Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0016153Pnpt16287.064ENSSHAG00000014040PNPT19986.613Sarcophilus_harrisii
MGP_CAROLIEiJ_G0016153Pnpt19270.376ENSSFOG00015017596PNPT19470.376Scleropages_formosus
MGP_CAROLIEiJ_G0016153Pnpt19476.391ENSSMAG00000018471PNPT19975.549Scophthalmus_maximus
MGP_CAROLIEiJ_G0016153Pnpt19577.254ENSSDUG00000018584PNPT19677.463Seriola_dumerili
MGP_CAROLIEiJ_G0016153Pnpt19577.793ENSSLDG00000023385PNPT19976.643Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0016153Pnpt18784.105ENSSARG00000012819PNPT18584.105Sorex_araneus
MGP_CAROLIEiJ_G0016153Pnpt19977.296ENSSPUG00000011785PNPT19778.920Sphenodon_punctatus
MGP_CAROLIEiJ_G0016153Pnpt19674.770ENSSPAG00000016880PNPT19875.451Stegastes_partitus
MGP_CAROLIEiJ_G0016153Pnpt19991.074ENSSSCG00000031882PNPT19890.874Sus_scrofa
MGP_CAROLIEiJ_G0016153Pnpt19380.521ENSTGUG00000006908PNPT110080.411Taeniopygia_guttata
MGP_CAROLIEiJ_G0016153Pnpt19475.168ENSTRUG00000005495PNPT19874.278Takifugu_rubripes
MGP_CAROLIEiJ_G0016153Pnpt19376.575ENSTNIG00000007460PNPT19975.941Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0016153Pnpt19961.647ENSTBEG00000010788PNPT19861.799Tupaia_belangeri
MGP_CAROLIEiJ_G0016153Pnpt19392.044ENSTTRG00000000029PNPT19992.044Tursiops_truncatus
MGP_CAROLIEiJ_G0016153Pnpt19294.340ENSUAMG00000017133PNPT19994.323Ursus_americanus
MGP_CAROLIEiJ_G0016153Pnpt19991.462ENSUMAG00000018844PNPT19691.623Ursus_maritimus
MGP_CAROLIEiJ_G0016153Pnpt19982.300ENSVPAG00000007097PNPT19782.484Vicugna_pacos
MGP_CAROLIEiJ_G0016153Pnpt19991.462ENSVVUG00000010034PNPT19791.623Vulpes_vulpes
MGP_CAROLIEiJ_G0016153Pnpt19479.757ENSXETG00000006075pnpt19479.757Xenopus_tropicalis
MGP_CAROLIEiJ_G0016153Pnpt19278.333ENSXCOG00000013381PNPT19778.333Xiphophorus_couchianus
MGP_CAROLIEiJ_G0016153Pnpt19576.393ENSXMAG00000016907PNPT19878.472Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us