EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0016277 (Gene tree)
Gene ID
110305259
Gene Symbol
Cnot6
Alias
A230103N10Rik
Full Name
CCR4-NOT transcription complex subunit 6
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
42075 bases
Position
chr11:44554941-44597015
Accession
110305259
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0026390Exo_endo_phosPF03372.236.7e-2211
MGP_CAROLIEiJ_P0026388Exo_endo_phosPF03372.236.9e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0026389-2244--- (aa)--
MGP_CAROLIEiJ_T0026388-5723-MGP_CAROLIEiJ_P0026388557 (aa)XP_021032795UPI0000192B33
MGP_CAROLIEiJ_T0026390-2525-MGP_CAROLIEiJ_P0026390552 (aa)XP_021032796UPI00001E5959
MGP_CAROLIEiJ_T0026391-599--- (aa)--
MGP_CAROLIEiJ_T0026392-852--- (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0016277's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0016277's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0016277Cnot610077.355MGP_CAROLIEiJ_G0027429Cnot6l10077.355
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0016277Cnot610096.230ENSG00000113300CNOT6100100.000Homo_sapiens
MGP_CAROLIEiJ_G0016277Cnot610086.225ENSAPOG00000009994cnot6b10086.225Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0016277Cnot610096.780ENSAMEG00000000949CNOT69996.780Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0016277Cnot610085.740ENSACIG00000016566cnot6b10085.740Amphilophus_citrinellus
MGP_CAROLIEiJ_G0016277Cnot610086.225ENSAOCG00000006893cnot6b10086.225Amphiprion_ocellaris
MGP_CAROLIEiJ_G0016277Cnot610086.225ENSAPEG00000016949cnot6b10086.225Amphiprion_percula
MGP_CAROLIEiJ_G0016277Cnot610084.258ENSATEG00000007862cnot6b10084.258Anabas_testudineus
MGP_CAROLIEiJ_G0016277Cnot610095.153ENSAPLG00000012715CNOT69995.153Anas_platyrhynchos
MGP_CAROLIEiJ_G0016277Cnot610092.460ENSACAG00000016548CNOT610092.460Anolis_carolinensis
MGP_CAROLIEiJ_G0016277Cnot610096.589ENSANAG00000030436CNOT69696.589Aotus_nancymaae
MGP_CAROLIEiJ_G0016277Cnot610084.258ENSACLG00000008279cnot6b10085.152Astatotilapia_calliptera
MGP_CAROLIEiJ_G0016277Cnot610084.767ENSAMXG00000034694cnot6b10084.767Astyanax_mexicanus
MGP_CAROLIEiJ_G0016277Cnot610086.022ENSAMXG00000019140cnot6a10086.022Astyanax_mexicanus
MGP_CAROLIEiJ_G0016277Cnot610096.768ENSBTAG00000017362CNOT610096.768Bos_taurus
MGP_CAROLIEiJ_G0016277Cnot610096.409ENSCJAG00000009795CNOT610096.409Callithrix_jacchus
MGP_CAROLIEiJ_G0016277Cnot610097.127ENSCAFG00000000464CNOT610097.127Canis_familiaris
MGP_CAROLIEiJ_G0016277Cnot610097.127ENSCAFG00020002441CNOT610097.127Canis_lupus_dingo
MGP_CAROLIEiJ_G0016277Cnot610096.409ENSCHIG00000019100CNOT610096.409Capra_hircus
MGP_CAROLIEiJ_G0016277Cnot610094.794ENSTSYG00000003982CNOT610094.794Carlito_syrichta
MGP_CAROLIEiJ_G0016277Cnot610092.460ENSCPOG00000035657CNOT610092.460Cavia_porcellus
MGP_CAROLIEiJ_G0016277Cnot610092.460ENSCCAG00000033670CNOT610092.460Cebus_capucinus
MGP_CAROLIEiJ_G0016277Cnot610096.230ENSCATG00000042014CNOT610096.230Cercocebus_atys
MGP_CAROLIEiJ_G0016277Cnot610096.230ENSCLAG00000010489CNOT610096.230Chinchilla_lanigera
MGP_CAROLIEiJ_G0016277Cnot610096.230ENSCSAG00000008165CNOT610096.230Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0016277Cnot610095.691ENSCHOG00000009680CNOT610095.691Choloepus_hoffmanni
MGP_CAROLIEiJ_G0016277Cnot610094.434ENSCPBG00000008908CNOT610094.434Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0016277Cnot610096.409ENSCANG00000026756CNOT610096.409Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0016277Cnot610099.819ENSCGRG00001011452Cnot610099.819Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0016277Cnot610097.127ENSCGRG00000010407Cnot610097.127Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0016277Cnot610085.331ENSCSEG00000010939cnot6b10085.331Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0016277Cnot610084.946ENSCVAG00000010538cnot6b10084.946Cyprinodon_variegatus
MGP_CAROLIEiJ_G0016277Cnot610083.333ENSDARG00000101072cnot6b10083.333Danio_rerio
MGP_CAROLIEiJ_G0016277Cnot610085.484ENSDARG00000008255cnot6a10085.484Danio_rerio
MGP_CAROLIEiJ_G0016277Cnot610096.409ENSDNOG00000041644CNOT610096.409Dasypus_novemcinctus
MGP_CAROLIEiJ_G0016277Cnot610087.276ENSDORG00000001708Cnot610087.276Dipodomys_ordii
MGP_CAROLIEiJ_G0016277Cnot610077.102ENSETEG00000006975CNOT610077.102Echinops_telfairi
MGP_CAROLIEiJ_G0016277Cnot68992.698ENSEASG00005012957-9892.698Equus_asinus_asinus
MGP_CAROLIEiJ_G0016277Cnot610096.230ENSEASG00005012794-10096.230Equus_asinus_asinus
MGP_CAROLIEiJ_G0016277Cnot610091.304ENSECAG00000012704-9991.304Equus_caballus
MGP_CAROLIEiJ_G0016277Cnot610096.948ENSECAG00000019325CNOT610096.948Equus_caballus
MGP_CAROLIEiJ_G0016277Cnot610095.691ENSEEUG00000015382CNOT610095.691Erinaceus_europaeus
MGP_CAROLIEiJ_G0016277Cnot610081.362ENSELUG00000024580cnot6a10081.362Esox_lucius
MGP_CAROLIEiJ_G0016277Cnot610082.540ENSELUG00000015981cnot6b9982.540Esox_lucius
MGP_CAROLIEiJ_G0016277Cnot610097.127ENSFCAG00000001881CNOT610097.127Felis_catus
MGP_CAROLIEiJ_G0016277Cnot610095.332ENSFALG00000007699CNOT610095.332Ficedula_albicollis
MGP_CAROLIEiJ_G0016277Cnot610095.871ENSFDAG00000001999CNOT610095.871Fukomys_damarensis
MGP_CAROLIEiJ_G0016277Cnot66588.095ENSFHEG00000013756cnot6b9492.308Fundulus_heteroclitus
MGP_CAROLIEiJ_G0016277Cnot69584.121ENSGMOG00000009767cnot6b9984.121Gadus_morhua
MGP_CAROLIEiJ_G0016277Cnot610095.332ENSGALG00000034316CNOT610095.332Gallus_gallus
MGP_CAROLIEiJ_G0016277Cnot610085.125ENSGAFG00000008525cnot6b10085.125Gambusia_affinis
MGP_CAROLIEiJ_G0016277Cnot69582.420ENSGACG00000018046cnot6b9982.420Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0016277Cnot610078.636ENSGAGG00000012176CNOT610078.636Gopherus_agassizii
MGP_CAROLIEiJ_G0016277Cnot610096.230ENSGGOG00000003675CNOT610096.230Gorilla_gorilla
MGP_CAROLIEiJ_G0016277Cnot610084.436ENSHBUG00000002819cnot6b10085.331Haplochromis_burtoni
MGP_CAROLIEiJ_G0016277Cnot610096.409ENSHGLG00000017756CNOT610096.409Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0016277Cnot610096.409ENSHGLG00100005747CNOT610096.409Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016277Cnot610083.574ENSHCOG00000016176cnot6b10084.477Hippocampus_comes
MGP_CAROLIEiJ_G0016277Cnot610084.229ENSIPUG00000017482cnot6b10084.229Ictalurus_punctatus
MGP_CAROLIEiJ_G0016277Cnot610084.946ENSIPUG00000019831cnot6a10084.946Ictalurus_punctatus
MGP_CAROLIEiJ_G0016277Cnot610096.589ENSSTOG00000002803CNOT610096.589Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0016277Cnot610096.230ENSJJAG00000012296Cnot610096.230Jaculus_jaculus
MGP_CAROLIEiJ_G0016277Cnot610086.022ENSKMAG00000004640cnot6b10086.022Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0016277Cnot610083.363ENSLBEG00000027917cnot6b10084.258Labrus_bergylta
MGP_CAROLIEiJ_G0016277Cnot610089.068ENSLOCG00000010102cnot6b9989.068Lepisosteus_oculatus
MGP_CAROLIEiJ_G0016277Cnot610096.948ENSLAFG00000016742CNOT610096.948Loxodonta_africana
MGP_CAROLIEiJ_G0016277Cnot610096.230ENSMFAG00000030867CNOT610096.230Macaca_fascicularis
MGP_CAROLIEiJ_G0016277Cnot610096.230ENSMMUG00000018690CNOT610096.230Macaca_mulatta
MGP_CAROLIEiJ_G0016277Cnot610096.230ENSMNEG00000038565CNOT610096.230Macaca_nemestrina
MGP_CAROLIEiJ_G0016277Cnot610096.230ENSMLEG00000010555CNOT610096.230Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0016277Cnot610086.404ENSMAMG00000007515cnot6b10086.404Mastacembelus_armatus
MGP_CAROLIEiJ_G0016277Cnot610084.258ENSMZEG00005012899cnot6b10085.152Maylandia_zebra
MGP_CAROLIEiJ_G0016277Cnot610099.820ENSMAUG00000019798Cnot610099.820Mesocricetus_auratus
MGP_CAROLIEiJ_G0016277Cnot69886.213ENSMICG00000028378-9986.213Microcebus_murinus
MGP_CAROLIEiJ_G0016277Cnot610094.794ENSMICG00000013018-10094.794Microcebus_murinus
MGP_CAROLIEiJ_G0016277Cnot610099.820ENSMOCG00000021662Cnot610099.820Microtus_ochrogaster
MGP_CAROLIEiJ_G0016277Cnot610083.906ENSMMOG00000003227cnot6b10083.906Mola_mola
MGP_CAROLIEiJ_G0016277Cnot610095.153ENSMODG00000003979CNOT610095.153Monodelphis_domestica
MGP_CAROLIEiJ_G0016277Cnot610086.047ENSMALG00000014251cnot6b10086.047Monopterus_albus
MGP_CAROLIEiJ_G0016277Cnot6100100.000ENSMUSG00000020362Cnot6100100.000Mus_musculus
MGP_CAROLIEiJ_G0016277Cnot6100100.000MGP_PahariEiJ_G0017413Cnot6100100.000Mus_pahari
MGP_CAROLIEiJ_G0016277Cnot610099.641MGP_SPRETEiJ_G0017122Cnot610099.641Mus_spretus
MGP_CAROLIEiJ_G0016277Cnot610096.948ENSMPUG00000000587CNOT69696.948Mustela_putorius_furo
MGP_CAROLIEiJ_G0016277Cnot610094.484ENSMLUG00000010257CNOT610094.484Myotis_lucifugus
MGP_CAROLIEiJ_G0016277Cnot610098.743ENSNGAG00000008269Cnot610098.743Nannospalax_galili
MGP_CAROLIEiJ_G0016277Cnot610084.436ENSNBRG00000010798cnot6b10085.331Neolamprologus_brichardi
MGP_CAROLIEiJ_G0016277Cnot610095.833ENSNLEG00000002322CNOT610095.833Nomascus_leucogenys
MGP_CAROLIEiJ_G0016277Cnot68197.196ENSMEUG00000000025CNOT68197.196Notamacropus_eugenii
MGP_CAROLIEiJ_G0016277Cnot68894.988ENSOPRG00000008244-8894.988Ochotona_princeps
MGP_CAROLIEiJ_G0016277Cnot610095.332ENSODEG00000007041CNOT610095.332Octodon_degus
MGP_CAROLIEiJ_G0016277Cnot67584.397ENSONIG00000013027cnot6b9984.397Oreochromis_niloticus
MGP_CAROLIEiJ_G0016277Cnot610094.255ENSOANG00000010226CNOT610094.255Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0016277Cnot610095.349ENSOCUG00000011083CNOT610095.349Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0016277Cnot610084.794ENSORLG00000005059cnot6b10084.794Oryzias_latipes
MGP_CAROLIEiJ_G0016277Cnot610084.794ENSORLG00020012784cnot6b10084.794Oryzias_latipes_hni
MGP_CAROLIEiJ_G0016277Cnot69483.939ENSORLG00015022658cnot6b9883.939Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0016277Cnot610084.973ENSOMEG00000005295cnot6b10084.973Oryzias_melastigma
MGP_CAROLIEiJ_G0016277Cnot69495.992ENSOGAG00000032470CNOT610095.992Otolemur_garnettii
MGP_CAROLIEiJ_G0016277Cnot69796.125ENSOARG00000001003CNOT610096.125Ovis_aries
MGP_CAROLIEiJ_G0016277Cnot610096.230ENSPPAG00000032253CNOT610096.230Pan_paniscus
MGP_CAROLIEiJ_G0016277Cnot610096.948ENSPPRG00000011912CNOT610096.948Panthera_pardus
MGP_CAROLIEiJ_G0016277Cnot610096.948ENSPTIG00000016794CNOT610096.948Panthera_tigris_altaica
MGP_CAROLIEiJ_G0016277Cnot610096.230ENSPTRG00000017636CNOT610096.230Pan_troglodytes
MGP_CAROLIEiJ_G0016277Cnot610096.230ENSPANG00000016191CNOT610096.230Papio_anubis
MGP_CAROLIEiJ_G0016277Cnot610086.022ENSPKIG00000021368cnot6b10086.022Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0016277Cnot69894.853ENSPSIG00000017307CNOT610094.853Pelodiscus_sinensis
MGP_CAROLIEiJ_G0016277Cnot610085.560ENSPMGG00000011238cnot6b10085.560Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0016277Cnot610098.743ENSPEMG00000000627Cnot610098.743Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0016277Cnot610095.153ENSPCIG00000020319CNOT69995.153Phascolarctos_cinereus
MGP_CAROLIEiJ_G0016277Cnot610084.946ENSPFOG00000006291cnot6b10084.946Poecilia_formosa
MGP_CAROLIEiJ_G0016277Cnot610081.555ENSPLAG00000008266cnot6b10081.555Poecilia_latipinna
MGP_CAROLIEiJ_G0016277Cnot610085.125ENSPMEG00000009091cnot6b10085.125Poecilia_mexicana
MGP_CAROLIEiJ_G0016277Cnot610084.448ENSPREG00000003713cnot6b10084.448Poecilia_reticulata
MGP_CAROLIEiJ_G0016277Cnot610096.230ENSPPYG00000016137CNOT610096.230Pongo_abelii
MGP_CAROLIEiJ_G0016277Cnot67196.992ENSPCAG00000005599-59100.000Procavia_capensis
MGP_CAROLIEiJ_G0016277Cnot610091.203ENSPCOG00000017359CNOT610091.921Propithecus_coquereli
MGP_CAROLIEiJ_G0016277Cnot610091.921ENSPVAG00000003069CNOT610091.921Pteropus_vampyrus
MGP_CAROLIEiJ_G0016277Cnot610084.079ENSPNYG00000000321cnot6b10084.973Pundamilia_nyererei
MGP_CAROLIEiJ_G0016277Cnot610084.946ENSPNAG00000028816cnot6b10084.946Pygocentrus_nattereri
MGP_CAROLIEiJ_G0016277Cnot610086.201ENSPNAG00000029586cnot6a10086.201Pygocentrus_nattereri
MGP_CAROLIEiJ_G0016277Cnot610098.923ENSRNOG00000054891Cnot610098.923Rattus_norvegicus
MGP_CAROLIEiJ_G0016277Cnot610096.050ENSRBIG00000004309CNOT610096.050Rhinopithecus_bieti
MGP_CAROLIEiJ_G0016277Cnot610096.050ENSRROG00000035378CNOT610096.537Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0016277Cnot610096.409ENSSBOG00000030494CNOT610096.409Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0016277Cnot610095.153ENSSHAG00000017436CNOT610095.153Sarcophilus_harrisii
MGP_CAROLIEiJ_G0016277Cnot610085.484ENSSFOG00015022383cnot6a9685.484Scleropages_formosus
MGP_CAROLIEiJ_G0016277Cnot610087.276ENSSFOG00015015133CNOT610087.276Scleropages_formosus
MGP_CAROLIEiJ_G0016277Cnot610084.079ENSSMAG00000003084cnot6b10084.079Scophthalmus_maximus
MGP_CAROLIEiJ_G0016277Cnot610085.868ENSSDUG00000004151cnot6b10085.868Seriola_dumerili
MGP_CAROLIEiJ_G0016277Cnot610085.152ENSSLDG00000004448cnot6b10086.047Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0016277Cnot66476.816ENSSARG00000012650-10076.816Sorex_araneus
MGP_CAROLIEiJ_G0016277Cnot610094.075ENSSPUG00000007893CNOT610094.075Sphenodon_punctatus
MGP_CAROLIEiJ_G0016277Cnot610086.047ENSSPAG00000000149cnot6b10086.047Stegastes_partitus
MGP_CAROLIEiJ_G0016277Cnot610096.589ENSSSCG00000014009CNOT610097.186Sus_scrofa
MGP_CAROLIEiJ_G0016277Cnot610094.973ENSTGUG00000001119CNOT610094.973Taeniopygia_guttata
MGP_CAROLIEiJ_G0016277Cnot610083.483ENSTRUG00000002818cnot6b10083.483Takifugu_rubripes
MGP_CAROLIEiJ_G0016277Cnot610083.842ENSTNIG00000004443cnot6b9983.842Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0016277Cnot68766.119ENSTBEG00000017094-10066.119Tupaia_belangeri
MGP_CAROLIEiJ_G0016277Cnot610096.768ENSTTRG00000009363CNOT610096.768Tursiops_truncatus
MGP_CAROLIEiJ_G0016277Cnot67797.902ENSUAMG00000004579CNOT68897.902Ursus_americanus
MGP_CAROLIEiJ_G0016277Cnot610092.466ENSUMAG00000024577CNOT610092.466Ursus_maritimus
MGP_CAROLIEiJ_G0016277Cnot68396.028ENSVPAG00000003593CNOT68396.028Vicugna_pacos
MGP_CAROLIEiJ_G0016277Cnot610097.127ENSVVUG00000026940CNOT610097.127Vulpes_vulpes
MGP_CAROLIEiJ_G0016277Cnot610081.917ENSXCOG00000003360cnot6b10081.917Xiphophorus_couchianus
MGP_CAROLIEiJ_G0016277Cnot610085.125ENSXMAG00000008730cnot6b10085.125Xiphophorus_maculatus

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