EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0016306 (Gene tree)
Gene ID: 110304622
Gene Symbol: Zfp354a
Alias: Tcf17|kid1
Full Name: zinc finger protein 354A
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 13597 bases
Position: chr11:45964600-45978196
Accession: 110304622
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0026501	zf-C2H2	PF00096.26	1.1e-67	1	13
MGP_CAROLIEiJ_P0026501	zf-C2H2	PF00096.26	1.1e-67	2	13
MGP_CAROLIEiJ_P0026501	zf-C2H2	PF00096.26	1.1e-67	3	13
MGP_CAROLIEiJ_P0026501	zf-C2H2	PF00096.26	1.1e-67	4	13
MGP_CAROLIEiJ_P0026501	zf-C2H2	PF00096.26	1.1e-67	5	13
MGP_CAROLIEiJ_P0026501	zf-C2H2	PF00096.26	1.1e-67	6	13
MGP_CAROLIEiJ_P0026501	zf-C2H2	PF00096.26	1.1e-67	7	13
MGP_CAROLIEiJ_P0026501	zf-C2H2	PF00096.26	1.1e-67	8	13
MGP_CAROLIEiJ_P0026501	zf-C2H2	PF00096.26	1.1e-67	9	13
MGP_CAROLIEiJ_P0026501	zf-C2H2	PF00096.26	1.1e-67	10	13
MGP_CAROLIEiJ_P0026501	zf-C2H2	PF00096.26	1.1e-67	11	13
MGP_CAROLIEiJ_P0026501	zf-C2H2	PF00096.26	1.1e-67	12	13
MGP_CAROLIEiJ_P0026501	zf-C2H2	PF00096.26	1.1e-67	13	13
MGP_CAROLIEiJ_P0026499	zf-C2H2	PF00096.26	1.1e-67	1	13
MGP_CAROLIEiJ_P0026499	zf-C2H2	PF00096.26	1.1e-67	2	13
MGP_CAROLIEiJ_P0026499	zf-C2H2	PF00096.26	1.1e-67	3	13
MGP_CAROLIEiJ_P0026499	zf-C2H2	PF00096.26	1.1e-67	4	13
MGP_CAROLIEiJ_P0026499	zf-C2H2	PF00096.26	1.1e-67	5	13
MGP_CAROLIEiJ_P0026499	zf-C2H2	PF00096.26	1.1e-67	6	13
MGP_CAROLIEiJ_P0026499	zf-C2H2	PF00096.26	1.1e-67	7	13
MGP_CAROLIEiJ_P0026499	zf-C2H2	PF00096.26	1.1e-67	8	13
MGP_CAROLIEiJ_P0026499	zf-C2H2	PF00096.26	1.1e-67	9	13
MGP_CAROLIEiJ_P0026499	zf-C2H2	PF00096.26	1.1e-67	10	13
MGP_CAROLIEiJ_P0026499	zf-C2H2	PF00096.26	1.1e-67	11	13
MGP_CAROLIEiJ_P0026499	zf-C2H2	PF00096.26	1.1e-67	12	13
MGP_CAROLIEiJ_P0026499	zf-C2H2	PF00096.26	1.1e-67	13	13
MGP_CAROLIEiJ_P0026502	zf-C2H2	PF00096.26	1.1e-67	1	13
MGP_CAROLIEiJ_P0026502	zf-C2H2	PF00096.26	1.1e-67	2	13
MGP_CAROLIEiJ_P0026502	zf-C2H2	PF00096.26	1.1e-67	3	13
MGP_CAROLIEiJ_P0026502	zf-C2H2	PF00096.26	1.1e-67	4	13
MGP_CAROLIEiJ_P0026502	zf-C2H2	PF00096.26	1.1e-67	5	13
MGP_CAROLIEiJ_P0026502	zf-C2H2	PF00096.26	1.1e-67	6	13
MGP_CAROLIEiJ_P0026502	zf-C2H2	PF00096.26	1.1e-67	7	13
MGP_CAROLIEiJ_P0026502	zf-C2H2	PF00096.26	1.1e-67	8	13
MGP_CAROLIEiJ_P0026502	zf-C2H2	PF00096.26	1.1e-67	9	13
MGP_CAROLIEiJ_P0026502	zf-C2H2	PF00096.26	1.1e-67	10	13
MGP_CAROLIEiJ_P0026502	zf-C2H2	PF00096.26	1.1e-67	11	13
MGP_CAROLIEiJ_P0026502	zf-C2H2	PF00096.26	1.1e-67	12	13
MGP_CAROLIEiJ_P0026502	zf-C2H2	PF00096.26	1.1e-67	13	13
MGP_CAROLIEiJ_P0026501	zf-met	PF12874.7	6.3e-06	1	1
MGP_CAROLIEiJ_P0026499	zf-met	PF12874.7	6.4e-06	1	1
MGP_CAROLIEiJ_P0026502	zf-met	PF12874.7	6.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0026499	-	2585	XM_021176046	MGP_CAROLIEiJ_P0026499	572 (aa)	XP_021031705	UPI000A319BF1
MGP_CAROLIEiJ_T0026502	-	2079	-	MGP_CAROLIEiJ_P0026502	573 (aa)	XP_021031704	UPI000A31ACB0
MGP_CAROLIEiJ_T0026501	-	4187	XM_021176047	MGP_CAROLIEiJ_P0026501	571 (aa)	XP_021031706	UPI000A318C72
MGP_CAROLIEiJ_T0026500	-	429	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0016306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0016306's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0016306	Zfp354a	75	40.000	MGP_CAROLIEiJ_G0028343	Repin1	95	40.000
MGP_CAROLIEiJ_G0016306	Zfp354a	100	48.866	MGP_CAROLIEiJ_G0029614	Zfp715	96	48.866
MGP_CAROLIEiJ_G0016306	Zfp354a	69	41.667	MGP_CAROLIEiJ_G0029356	Zfp574	93	41.667
MGP_CAROLIEiJ_G0016306	Zfp354a	98	43.210	MGP_CAROLIEiJ_G0018661	Zfp759	99	48.622
MGP_CAROLIEiJ_G0016306	Zfp354a	100	46.715	MGP_CAROLIEiJ_G0018660	-	78	46.715
MGP_CAROLIEiJ_G0016306	Zfp354a	99	52.000	MGP_CAROLIEiJ_G0015655	-	94	48.963
MGP_CAROLIEiJ_G0016306	Zfp354a	71	38.136	MGP_CAROLIEiJ_G0031420	Zfp319	97	37.778
MGP_CAROLIEiJ_G0016306	Zfp354a	69	54.037	MGP_CAROLIEiJ_G0018274	Zkscan4	56	54.037
MGP_CAROLIEiJ_G0016306	Zfp354a	70	35.443	MGP_CAROLIEiJ_G0020389	Zfp597	84	35.443
MGP_CAROLIEiJ_G0016306	Zfp354a	99	45.091	MGP_CAROLIEiJ_G0030502	-	96	47.085
MGP_CAROLIEiJ_G0016306	Zfp354a	99	45.091	MGP_CAROLIEiJ_G0030501	Zfp764	96	47.085
MGP_CAROLIEiJ_G0016306	Zfp354a	98	48.248	MGP_CAROLIEiJ_G0029612	Zfp141	98	48.518
MGP_CAROLIEiJ_G0016306	Zfp354a	70	42.308	MGP_CAROLIEiJ_G0024724	Zfp64	73	35.242
MGP_CAROLIEiJ_G0016306	Zfp354a	98	50.000	MGP_CAROLIEiJ_G0021128	Zfp51	94	50.000
MGP_CAROLIEiJ_G0016306	Zfp354a	77	39.286	MGP_CAROLIEiJ_G0028463	Prdm5	85	36.293
MGP_CAROLIEiJ_G0016306	Zfp354a	69	43.953	MGP_CAROLIEiJ_G0026744	Zbtb17	62	39.672
MGP_CAROLIEiJ_G0016306	Zfp354a	97	55.949	MGP_CAROLIEiJ_G0018683	Zfp493	99	53.869
MGP_CAROLIEiJ_G0016306	Zfp354a	68	51.394	MGP_CAROLIEiJ_G0030498	Zfp768	55	48.540
MGP_CAROLIEiJ_G0016306	Zfp354a	69	49.738	MGP_CAROLIEiJ_G0029135	Zfp628	60	48.810
MGP_CAROLIEiJ_G0016306	Zfp354a	98	45.153	MGP_CAROLIEiJ_G0016437	Zfp867	96	45.153
MGP_CAROLIEiJ_G0016306	Zfp354a	70	56.675	MGP_CAROLIEiJ_G0029490	Zfp420	99	56.327
MGP_CAROLIEiJ_G0016306	Zfp354a	98	46.032	MGP_CAROLIEiJ_G0021132	Zfp948	97	46.196
MGP_CAROLIEiJ_G0016306	Zfp354a	98	42.857	MGP_CAROLIEiJ_G0019949	Zfp251	95	47.765
MGP_CAROLIEiJ_G0016306	Zfp354a	98	47.674	MGP_CAROLIEiJ_G0031203	Zfp882	99	47.674
MGP_CAROLIEiJ_G0016306	Zfp354a	69	47.458	MGP_CAROLIEiJ_G0029144	-	68	32.308
MGP_CAROLIEiJ_G0016306	Zfp354a	68	43.210	MGP_CAROLIEiJ_G0029146	Zfp784	65	35.514
MGP_CAROLIEiJ_G0016306	Zfp354a	73	47.458	MGP_CAROLIEiJ_G0029143	-	82	32.766
MGP_CAROLIEiJ_G0016306	Zfp354a	70	40.095	MGP_CAROLIEiJ_G0016391	Zfp672	96	53.659
MGP_CAROLIEiJ_G0016306	Zfp354a	98	53.061	MGP_CAROLIEiJ_G0031579	Zfp1	99	53.061
MGP_CAROLIEiJ_G0016306	Zfp354a	89	48.148	MGP_CAROLIEiJ_G0022445	Zfp236	64	48.148
MGP_CAROLIEiJ_G0016306	Zfp354a	98	50.000	MGP_CAROLIEiJ_G0029427	-	99	50.000
MGP_CAROLIEiJ_G0016306	Zfp354a	69	48.819	MGP_CAROLIEiJ_G0027508	Gfi1	100	48.819
MGP_CAROLIEiJ_G0016306	Zfp354a	98	47.179	MGP_CAROLIEiJ_G0029329	Zfp94	99	47.179
MGP_CAROLIEiJ_G0016306	Zfp354a	98	51.304	MGP_CAROLIEiJ_G0029321	Zfp112	99	50.975
MGP_CAROLIEiJ_G0016306	Zfp354a	98	49.289	MGP_CAROLIEiJ_G0029322	Zfp235	99	51.637
MGP_CAROLIEiJ_G0016306	Zfp354a	89	52.187	MGP_CAROLIEiJ_G0029324	Zfp111	75	51.235
MGP_CAROLIEiJ_G0016306	Zfp354a	99	52.055	MGP_CAROLIEiJ_G0029326	Zfp108	100	52.055
MGP_CAROLIEiJ_G0016306	Zfp354a	83	46.742	MGP_CAROLIEiJ_G0029327	Zfp93	75	46.742
MGP_CAROLIEiJ_G0016306	Zfp354a	69	46.698	MGP_CAROLIEiJ_G0027176	Zbtb49	61	47.222
MGP_CAROLIEiJ_G0016306	Zfp354a	98	53.909	MGP_CAROLIEiJ_G0024261	Zfp661	95	53.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0016306	Zfp354a	100	83.421	ENSCAFG00020003589	-	99	84.035	Canis_lupus_dingo
MGP_CAROLIEiJ_G0016306	Zfp354a	100	77.686	ENSTSYG00000008405	-	100	77.686	Carlito_syrichta
MGP_CAROLIEiJ_G0016306	Zfp354a	99	78.070	ENSCAPG00000013118	-	99	78.070	Cavia_aperea
MGP_CAROLIEiJ_G0016306	Zfp354a	99	82.601	ENSCPOG00000034791	-	99	82.601	Cavia_porcellus
MGP_CAROLIEiJ_G0016306	Zfp354a	97	81.495	ENSCLAG00000014648	-	100	81.495	Chinchilla_lanigera
MGP_CAROLIEiJ_G0016306	Zfp354a	91	81.919	ENSCHOG00000008173	-	91	81.919	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0016306	Zfp354a	69	94.704	ENSCHOG00000003898	-	100	94.704	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0016306	Zfp354a	99	91.434	ENSCGRG00001021088	Zfp354a	100	91.379	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0016306	Zfp354a	99	91.434	ENSCGRG00000015037	Zfp354a	100	91.379	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0016306	Zfp354a	69	95.619	ENSDNOG00000043806	-	100	95.619	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0016306	Zfp354a	99	83.882	ENSDORG00000009396	Zfp354a	100	83.882	Dipodomys_ordii
MGP_CAROLIEiJ_G0016306	Zfp354a	84	78.615	ENSETEG00000020249	-	99	78.615	Echinops_telfairi
MGP_CAROLIEiJ_G0016306	Zfp354a	85	80.233	ENSEEUG00000008362	-	99	80.233	Erinaceus_europaeus
MGP_CAROLIEiJ_G0016306	Zfp354a	99	82.548	ENSFDAG00000015190	-	100	82.548	Fukomys_damarensis
MGP_CAROLIEiJ_G0016306	Zfp354a	100	81.913	ENSHGLG00000005975	-	100	81.913	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0016306	Zfp354a	85	83.402	ENSHGLG00100012284	-	100	83.402	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016306	Zfp354a	85	84.137	ENSSTOG00000024118	-	97	84.137	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0016306	Zfp354a	84	80.556	ENSLAFG00000002909	-	100	80.556	Loxodonta_africana
MGP_CAROLIEiJ_G0016306	Zfp354a	85	90.524	ENSMAUG00000000735	Zfp354a	94	90.524	Mesocricetus_auratus
MGP_CAROLIEiJ_G0016306	Zfp354a	99	80.464	ENSMICG00000006390	ZNF354A	100	80.464	Microcebus_murinus
MGP_CAROLIEiJ_G0016306	Zfp354a	99	89.510	ENSMOCG00000003692	Zfp354a	100	88.908	Microtus_ochrogaster
MGP_CAROLIEiJ_G0016306	Zfp354a	100	98.080	ENSMUSG00000020364	Zfp354a	100	98.080	Mus_musculus
MGP_CAROLIEiJ_G0016306	Zfp354a	100	96.161	MGP_PahariEiJ_G0017441	Zfp354a	100	96.161	Mus_pahari
MGP_CAROLIEiJ_G0016306	Zfp354a	99	85.340	ENSNGAG00000011769	Zfp354a	100	85.340	Nannospalax_galili
MGP_CAROLIEiJ_G0016306	Zfp354a	90	83.205	ENSODEG00000008278	-	100	83.205	Octodon_degus
MGP_CAROLIEiJ_G0016306	Zfp354a	98	82.660	ENSPPAG00000039371	ZNF354A	100	82.660	Pan_paniscus
MGP_CAROLIEiJ_G0016306	Zfp354a	85	82.979	ENSPTRG00000017606	ZNF354A	97	80.271	Pan_troglodytes
MGP_CAROLIEiJ_G0016306	Zfp354a	100	88.966	ENSPEMG00000024167	Zfp354a	100	88.966	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0016306	Zfp354a	85	84.663	ENSUAMG00000000212	-	90	84.663	Ursus_americanus