EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0016322 (Gene tree)
Gene ID: 110305873
Gene Symbol: Cdkl3
Alias: B230379H01Rik
Full Name: cyclin dependent kinase like 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 80952 bases
Position: chr11:46899317-46980268
Accession: 110305873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0026569	RIO1	PF01163.22	4.2e-05	1	1
MGP_CAROLIEiJ_P0026567	RIO1	PF01163.22	0.00026	1	1
MGP_CAROLIEiJ_P0026572	RIO1	PF01163.22	0.00034	1	1
MGP_CAROLIEiJ_P0026566	RIO1	PF01163.22	0.00034	1	1
MGP_CAROLIEiJ_P0026568	RIO1	PF01163.22	0.00034	1	1
MGP_CAROLIEiJ_P0026565	RIO1	PF01163.22	0.00034	1	1
MGP_CAROLIEiJ_P0026564	RIO1	PF01163.22	0.00036	1	1
MGP_CAROLIEiJ_P0026573	RIO1	PF01163.22	0.00036	1	1
MGP_CAROLIEiJ_P0026563	RIO1	PF01163.22	0.00036	1	1
MGP_CAROLIEiJ_P0026571	RIO1	PF01163.22	0.00039	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0026576	-	631	-	MGP_CAROLIEiJ_P0026576	97 (aa)	-	UPI000059DC59
MGP_CAROLIEiJ_T0026574	-	1366	-	MGP_CAROLIEiJ_P0026574	208 (aa)	-	-
MGP_CAROLIEiJ_T0026575	-	513	-	MGP_CAROLIEiJ_P0026575	137 (aa)	-	UPI0000EE0542
MGP_CAROLIEiJ_T0026570	-	2573	-	MGP_CAROLIEiJ_P0026570	575 (aa)	-	-
MGP_CAROLIEiJ_T0026572	-	1948	-	MGP_CAROLIEiJ_P0026572	597 (aa)	-	-
MGP_CAROLIEiJ_T0026573	-	2770	-	MGP_CAROLIEiJ_P0026573	610 (aa)	XP_021033681	UPI000A3157F2
MGP_CAROLIEiJ_T0026563	-	2765	XM_021178024	MGP_CAROLIEiJ_P0026563	595 (aa)	XP_021033683	UPI000A31A0A2
MGP_CAROLIEiJ_T0026571	-	2074	XM_021178012	MGP_CAROLIEiJ_P0026571	638 (aa)	XP_021033670	UPI000A3191BB
MGP_CAROLIEiJ_T0026565	-	2063	XM_021178025	MGP_CAROLIEiJ_P0026565	585 (aa)	XP_021033684	UPI000A315E5B
MGP_CAROLIEiJ_T0026564	-	2749	XM_021178023	MGP_CAROLIEiJ_P0026564	610 (aa)	XP_021033681	UPI000A3157F2
MGP_CAROLIEiJ_T0026567	-	2217	-	MGP_CAROLIEiJ_P0026567	457 (aa)	-	-
MGP_CAROLIEiJ_T0026566	-	2051	XM_021178028	MGP_CAROLIEiJ_P0026566	581 (aa)	XP_021033687	-
MGP_CAROLIEiJ_T0026569	-	665	-	MGP_CAROLIEiJ_P0026569	192 (aa)	-	UPI00015F3B5C
MGP_CAROLIEiJ_T0026568	-	2008	-	MGP_CAROLIEiJ_P0026568	581 (aa)	-	-
MGP_CAROLIEiJ_T0026578	-	467	-	MGP_CAROLIEiJ_P0026578	91 (aa)	-	-
MGP_CAROLIEiJ_T0026577	-	489	-	MGP_CAROLIEiJ_P0026577	79 (aa)	-	UPI00015F3B5D

Gene Model

Click here to download MGP_CAROLIEiJ_G0016322's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0016322's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0016322	Cdkl3	90	35.556	MGP_CAROLIEiJ_G0027465	Mapk10	84	37.908
MGP_CAROLIEiJ_G0016322	Cdkl3	88	33.721	MGP_CAROLIEiJ_G0022636	Mark2	87	33.721

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0016322	Cdkl3	100	94.271	ENSCLAG00000013562	CDKL3	100	94.271	Chinchilla_lanigera
MGP_CAROLIEiJ_G0016322	Cdkl3	100	100.000	ENSCGRG00001024159	Cdkl3	92	98.299	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0016322	Cdkl3	100	99.479	ENSCGRG00000008921	Cdkl3	100	99.479	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0016322	Cdkl3	100	95.833	ENSDORG00000002519	-	100	95.833	Dipodomys_ordii
MGP_CAROLIEiJ_G0016322	Cdkl3	100	98.438	ENSFCAG00000024742	CDKL3	99	80.372	Felis_catus
MGP_CAROLIEiJ_G0016322	Cdkl3	100	92.708	ENSHGLG00000018175	-	97	92.166	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0016322	Cdkl3	100	92.708	ENSHGLG00100013066	-	100	92.708	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016322	Cdkl3	100	96.875	ENSJJAG00000000547	-	100	96.875	Jaculus_jaculus
MGP_CAROLIEiJ_G0016322	Cdkl3	100	96.354	ENSLAFG00000011468	CDKL3	100	82.412	Loxodonta_africana
MGP_CAROLIEiJ_G0016322	Cdkl3	100	100.000	ENSMAUG00000010031	-	100	100.000	Mesocricetus_auratus
MGP_CAROLIEiJ_G0016322	Cdkl3	100	97.917	ENSMICG00000004579	CDKL3	96	81.952	Microcebus_murinus
MGP_CAROLIEiJ_G0016322	Cdkl3	100	100.000	ENSMOCG00000012243	-	100	100.000	Microtus_ochrogaster
MGP_CAROLIEiJ_G0016322	Cdkl3	100	100.000	ENSMUSG00000020389	Cdkl3	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0016322	Cdkl3	100	100.000	MGP_PahariEiJ_G0017457	Cdkl3	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0016322	Cdkl3	100	100.000	MGP_SPRETEiJ_G0017166	Cdkl3	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0016322	Cdkl3	100	99.479	ENSMPUG00000010119	CDKL3	99	82.521	Mustela_putorius_furo
MGP_CAROLIEiJ_G0016322	Cdkl3	100	94.792	ENSMLUG00000012902	CDKL3	99	79.561	Myotis_lucifugus
MGP_CAROLIEiJ_G0016322	Cdkl3	100	96.354	ENSOANG00000000233	CDKL3	100	71.285	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0016322	Cdkl3	100	97.917	ENSPPRG00000005837	CDKL3	99	84.989	Panthera_pardus
MGP_CAROLIEiJ_G0016322	Cdkl3	100	97.917	ENSPTIG00000019406	CDKL3	99	83.275	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0016322	Cdkl3	100	100.000	ENSPEMG00000021980	-	100	100.000	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0016322	Cdkl3	100	98.958	ENSPVAG00000012429	CDKL3	99	78.415	Pteropus_vampyrus
MGP_CAROLIEiJ_G0016322	Cdkl3	100	99.479	ENSRNOG00000054806	LOC108348323	100	93.802	Rattus_norvegicus
MGP_CAROLIEiJ_G0016322	Cdkl3	100	99.479	ENSRNOG00000059485	Cdkl3	100	94.958	Rattus_norvegicus