EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0016383 (Gene tree)
Gene ID: 110305372
Gene Symbol: Larp1
Alias: 1810024J12Rik|3110040D16Rik|Larp
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 53121 bases
Position: chr11:52846088-52899208
Accession: 110305372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0026801	La	PF05383.17	1.5e-20	1	1
MGP_CAROLIEiJ_P0026802	La	PF05383.17	1.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0026802	-	5535	-	MGP_CAROLIEiJ_P0026802	1072 (aa)	XP_021032979	UPI000A31A9E1
MGP_CAROLIEiJ_T0026803	-	746	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0026801	-	5532	-	MGP_CAROLIEiJ_P0026801	1072 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0016383's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0016383's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0016383	Larp1	89	94.979	ENSG00000155506	LARP1	100	94.788	Homo_sapiens
MGP_CAROLIEiJ_G0016383	Larp1	88	82.143	ENSAPOG00000020685	larp1	99	82.143	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0016383	Larp1	89	95.193	ENSAMEG00000016673	LARP1	100	95.193	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0016383	Larp1	69	74.665	ENSACIG00000012994	larp1	94	75.238	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0016383	Larp1	77	70.270	ENSAOCG00000007792	larp1	98	70.505	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0016383	Larp1	98	65.492	ENSAPEG00000022246	larp1	98	65.431	Amphiprion_percula
MGP_CAROLIEiJ_G0016383	Larp1	97	63.730	ENSATEG00000013523	larp1	98	63.520	Anabas_testudineus
MGP_CAROLIEiJ_G0016383	Larp1	83	83.687	ENSAPLG00000007559	LARP1	100	83.687	Anas_platyrhynchos
MGP_CAROLIEiJ_G0016383	Larp1	89	79.086	ENSACAG00000004071	LARP1	100	79.086	Anolis_carolinensis
MGP_CAROLIEiJ_G0016383	Larp1	89	95.397	ENSANAG00000029949	LARP1	100	92.308	Aotus_nancymaae
MGP_CAROLIEiJ_G0016383	Larp1	99	64.510	ENSACLG00000015256	larp1	98	67.103	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0016383	Larp1	88	70.126	ENSAMXG00000000859	larp1	97	66.318	Astyanax_mexicanus
MGP_CAROLIEiJ_G0016383	Larp1	100	90.282	ENSBTAG00000008443	LARP1	100	90.100	Bos_taurus
MGP_CAROLIEiJ_G0016383	Larp1	100	90.727	ENSCJAG00000004454	LARP1	100	90.455	Callithrix_jacchus
MGP_CAROLIEiJ_G0016383	Larp1	89	95.807	ENSCAFG00000017639	LARP1	99	95.807	Canis_familiaris
MGP_CAROLIEiJ_G0016383	Larp1	83	95.978	ENSCAFG00020023860	LARP1	100	95.978	Canis_lupus_dingo
MGP_CAROLIEiJ_G0016383	Larp1	100	90.700	ENSCHIG00000014414	LARP1	100	90.406	Capra_hircus
MGP_CAROLIEiJ_G0016383	Larp1	95	90.546	ENSTSYG00000013732	LARP1	99	91.405	Carlito_syrichta
MGP_CAROLIEiJ_G0016383	Larp1	79	93.735	ENSCAPG00000013865	LARP1	87	93.735	Cavia_aperea
MGP_CAROLIEiJ_G0016383	Larp1	89	95.908	ENSCPOG00000003377	LARP1	99	95.908	Cavia_porcellus
MGP_CAROLIEiJ_G0016383	Larp1	100	90.818	ENSCCAG00000025201	LARP1	100	90.727	Cebus_capucinus
MGP_CAROLIEiJ_G0016383	Larp1	100	87.364	ENSCATG00000030675	LARP1	93	94.979	Cercocebus_atys
MGP_CAROLIEiJ_G0016383	Larp1	89	96.432	ENSCLAG00000012755	LARP1	97	96.432	Chinchilla_lanigera
MGP_CAROLIEiJ_G0016383	Larp1	83	91.508	ENSCSAG00000010800	LARP1	100	91.397	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0016383	Larp1	85	88.210	ENSCHOG00000012716	LARP1	92	88.210	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0016383	Larp1	92	80.181	ENSCPBG00000002173	LARP1	94	80.789	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0016383	Larp1	89	95.084	ENSCANG00000037418	LARP1	93	95.084	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0016383	Larp1	100	97.295	ENSCGRG00001016913	Larp1	100	97.295	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0016383	Larp1	86	91.948	ENSCGRG00000009916	Larp1	100	92.492	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0016383	Larp1	99	63.521	ENSCSEG00000016431	larp1	99	64.620	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0016383	Larp1	99	63.481	ENSCVAG00000022687	larp1	98	64.007	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0016383	Larp1	92	65.331	ENSDARG00000101722	larp1	95	65.587	Danio_rerio
MGP_CAROLIEiJ_G0016383	Larp1	100	89.483	ENSDNOG00000012073	LARP1	100	88.849	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0016383	Larp1	89	92.550	ENSDORG00000002897	Larp1	98	92.445	Dipodomys_ordii
MGP_CAROLIEiJ_G0016383	Larp1	82	95.455	ENSETEG00000020251	LARP1	100	95.455	Echinops_telfairi
MGP_CAROLIEiJ_G0016383	Larp1	100	90.827	ENSEASG00005001070	LARP1	100	90.372	Equus_asinus_asinus
MGP_CAROLIEiJ_G0016383	Larp1	100	91.008	ENSECAG00000017002	LARP1	79	90.372	Equus_caballus
MGP_CAROLIEiJ_G0016383	Larp1	87	89.829	ENSEEUG00000001065	LARP1	100	89.829	Erinaceus_europaeus
MGP_CAROLIEiJ_G0016383	Larp1	99	63.167	ENSELUG00000019403	larp1	99	63.891	Esox_lucius
MGP_CAROLIEiJ_G0016383	Larp1	100	90.653	ENSFCAG00000000592	LARP1	100	90.653	Felis_catus
MGP_CAROLIEiJ_G0016383	Larp1	78	80.237	ENSFALG00000008335	LARP1	99	80.592	Ficedula_albicollis
MGP_CAROLIEiJ_G0016383	Larp1	89	96.118	ENSFDAG00000021125	LARP1	99	96.118	Fukomys_damarensis
MGP_CAROLIEiJ_G0016383	Larp1	63	53.191	ENSFHEG00000020307	larp1	92	62.573	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0016383	Larp1	100	77.943	ENSGALG00000040109	LARP1	100	77.602	Gallus_gallus
MGP_CAROLIEiJ_G0016383	Larp1	100	76.838	ENSGAGG00000025113	LARP1	99	80.392	Gopherus_agassizii
MGP_CAROLIEiJ_G0016383	Larp1	89	94.979	ENSGGOG00000006048	LARP1	93	94.979	Gorilla_gorilla
MGP_CAROLIEiJ_G0016383	Larp1	99	64.892	ENSHBUG00000020762	larp1	97	68.665	Haplochromis_burtoni
MGP_CAROLIEiJ_G0016383	Larp1	100	91.009	ENSHGLG00000006267	LARP1	100	90.926	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0016383	Larp1	89	95.803	ENSHGLG00100014230	-	99	95.803	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016383	Larp1	98	75.570	ENSHGLG00100003395	-	91	77.744	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016383	Larp1	92	79.765	ENSHCOG00000010786	larp1	99	79.765	Hippocampus_comes
MGP_CAROLIEiJ_G0016383	Larp1	97	62.500	ENSIPUG00000019105	Larp1	93	66.044	Ictalurus_punctatus
MGP_CAROLIEiJ_G0016383	Larp1	89	93.389	ENSSTOG00000005678	LARP1	99	93.389	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0016383	Larp1	100	87.721	ENSJJAG00000016950	Larp1	100	86.574	Jaculus_jaculus
MGP_CAROLIEiJ_G0016383	Larp1	97	66.417	ENSKMAG00000018468	larp1	98	67.343	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0016383	Larp1	99	63.845	ENSLBEG00000027172	larp1	98	64.121	Labrus_bergylta
MGP_CAROLIEiJ_G0016383	Larp1	94	70.780	ENSLOCG00000012457	larp1	99	70.780	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0016383	Larp1	100	89.649	ENSLAFG00000008991	LARP1	100	89.805	Loxodonta_africana
MGP_CAROLIEiJ_G0016383	Larp1	89	94.665	ENSMFAG00000031651	LARP1	93	94.665	Macaca_fascicularis
MGP_CAROLIEiJ_G0016383	Larp1	89	91.109	ENSMMUG00000009411	LARP1	99	91.004	Macaca_mulatta
MGP_CAROLIEiJ_G0016383	Larp1	90	90.834	ENSMNEG00000039294	LARP1	100	94.637	Macaca_nemestrina
MGP_CAROLIEiJ_G0016383	Larp1	89	95.084	ENSMLEG00000035142	LARP1	93	95.084	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0016383	Larp1	99	64.057	ENSMAMG00000021788	larp1	99	64.107	Mastacembelus_armatus
MGP_CAROLIEiJ_G0016383	Larp1	99	64.510	ENSMZEG00005009345	larp1	98	67.103	Maylandia_zebra
MGP_CAROLIEiJ_G0016383	Larp1	89	80.352	ENSMGAG00000005696	LARP1	99	80.352	Meleagris_gallopavo
MGP_CAROLIEiJ_G0016383	Larp1	100	96.735	ENSMAUG00000001385	Larp1	100	96.735	Mesocricetus_auratus
MGP_CAROLIEiJ_G0016383	Larp1	89	94.025	ENSMICG00000000837	LARP1	99	95.633	Microcebus_murinus
MGP_CAROLIEiJ_G0016383	Larp1	100	97.015	ENSMOCG00000008920	Larp1	100	97.015	Microtus_ochrogaster
MGP_CAROLIEiJ_G0016383	Larp1	88	59.059	ENSMMOG00000013364	larp1	95	53.085	Mola_mola
MGP_CAROLIEiJ_G0016383	Larp1	89	83.091	ENSMODG00000008663	LARP1	99	83.091	Monodelphis_domestica
MGP_CAROLIEiJ_G0016383	Larp1	99	64.247	ENSMALG00000017180	larp1	99	64.292	Monopterus_albus
MGP_CAROLIEiJ_G0016383	Larp1	100	99.347	ENSMUSG00000037331	Larp1	100	99.347	Mus_musculus
MGP_CAROLIEiJ_G0016383	Larp1	100	98.884	MGP_PahariEiJ_G0017518	Larp1	100	98.884	Mus_pahari
MGP_CAROLIEiJ_G0016383	Larp1	100	99.440	MGP_SPRETEiJ_G0017225	Larp1	100	99.440	Mus_spretus
MGP_CAROLIEiJ_G0016383	Larp1	82	89.945	ENSMPUG00000013564	LARP1	99	89.724	Mustela_putorius_furo
MGP_CAROLIEiJ_G0016383	Larp1	89	91.195	ENSMLUG00000002608	LARP1	100	91.195	Myotis_lucifugus
MGP_CAROLIEiJ_G0016383	Larp1	90	91.701	ENSNGAG00000001098	Larp1	100	91.598	Nannospalax_galili
MGP_CAROLIEiJ_G0016383	Larp1	90	66.667	ENSNBRG00000008963	larp1	95	67.692	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0016383	Larp1	89	91.832	ENSNLEG00000016588	LARP1	99	88.819	Nomascus_leucogenys
MGP_CAROLIEiJ_G0016383	Larp1	89	76.996	ENSMEUG00000002957	LARP1	99	77.311	Notamacropus_eugenii
MGP_CAROLIEiJ_G0016383	Larp1	89	96.118	ENSOPRG00000013014	LARP1	99	96.118	Ochotona_princeps
MGP_CAROLIEiJ_G0016383	Larp1	89	95.488	ENSODEG00000010824	LARP1	99	95.488	Octodon_degus
MGP_CAROLIEiJ_G0016383	Larp1	99	65.845	ENSONIG00000017308	larp1	99	65.568	Oreochromis_niloticus
MGP_CAROLIEiJ_G0016383	Larp1	90	81.155	ENSOANG00000005096	LARP1	100	81.781	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0016383	Larp1	100	92.791	ENSOCUG00000013066	LARP1	100	92.699	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0016383	Larp1	99	62.940	ENSORLG00000000824	larp1	98	70.463	Oryzias_latipes
MGP_CAROLIEiJ_G0016383	Larp1	99	63.370	ENSORLG00020022241	larp1	99	63.370	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0016383	Larp1	99	62.009	ENSORLG00015007538	larp1	99	62.056	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0016383	Larp1	97	63.390	ENSOMEG00000003134	larp1	97	63.197	Oryzias_melastigma
MGP_CAROLIEiJ_G0016383	Larp1	89	95.383	ENSOGAG00000016750	LARP1	99	95.383	Otolemur_garnettii
MGP_CAROLIEiJ_G0016383	Larp1	89	92.984	ENSOARG00000009893	LARP1	99	93.403	Ovis_aries
MGP_CAROLIEiJ_G0016383	Larp1	89	94.979	ENSPPAG00000042993	LARP1	93	94.979	Pan_paniscus
MGP_CAROLIEiJ_G0016383	Larp1	95	89.655	ENSPPRG00000009780	LARP1	96	92.894	Panthera_pardus
MGP_CAROLIEiJ_G0016383	Larp1	95	89.655	ENSPTIG00000007013	LARP1	96	92.894	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0016383	Larp1	100	87.545	ENSPTRG00000017447	LARP1	93	94.874	Pan_troglodytes
MGP_CAROLIEiJ_G0016383	Larp1	100	87.455	ENSPANG00000008080	LARP1	93	94.979	Papio_anubis
MGP_CAROLIEiJ_G0016383	Larp1	96	66.856	ENSPKIG00000010096	larp1	99	65.932	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0016383	Larp1	98	61.173	ENSPKIG00000017153	-	99	62.293	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0016383	Larp1	95	62.924	ENSPMGG00000011599	larp1	98	63.619	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0016383	Larp1	89	94.235	ENSPEMG00000022523	Larp1	99	94.235	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0016383	Larp1	97	79.381	ENSPCIG00000019242	LARP1	90	79.475	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0016383	Larp1	97	64.513	ENSPFOG00000005836	larp1	98	64.195	Poecilia_formosa
MGP_CAROLIEiJ_G0016383	Larp1	97	65.005	ENSPLAG00000008936	larp1	98	64.410	Poecilia_latipinna
MGP_CAROLIEiJ_G0016383	Larp1	97	64.695	ENSPMEG00000013656	larp1	98	64.557	Poecilia_mexicana
MGP_CAROLIEiJ_G0016383	Larp1	86	68.372	ENSPREG00000005726	larp1	98	67.308	Poecilia_reticulata
MGP_CAROLIEiJ_G0016383	Larp1	89	89.927	ENSPCAG00000006407	LARP1	99	89.927	Procavia_capensis
MGP_CAROLIEiJ_G0016383	Larp1	89	87.408	ENSPCOG00000016949	LARP1	99	90.976	Propithecus_coquereli
MGP_CAROLIEiJ_G0016383	Larp1	100	90.127	ENSPVAG00000002262	LARP1	100	90.127	Pteropus_vampyrus
MGP_CAROLIEiJ_G0016383	Larp1	99	64.420	ENSPNYG00000007938	larp1	98	67.103	Pundamilia_nyererei
MGP_CAROLIEiJ_G0016383	Larp1	99	65.125	ENSPNAG00000021427	larp1	99	65.540	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0016383	Larp1	89	94.869	ENSRNOG00000031544	Larp1	99	94.869	Rattus_norvegicus
MGP_CAROLIEiJ_G0016383	Larp1	89	94.979	ENSRBIG00000038005	LARP1	93	94.979	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0016383	Larp1	89	94.979	ENSRROG00000034073	LARP1	100	94.972	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0016383	Larp1	89	95.488	ENSSBOG00000019816	LARP1	100	91.745	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0016383	Larp1	89	84.551	ENSSHAG00000011115	LARP1	100	84.551	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0016383	Larp1	98	64.504	ENSSFOG00015018058	-	98	64.804	Scleropages_formosus
MGP_CAROLIEiJ_G0016383	Larp1	89	68.016	ENSSFOG00015020304	larp1	95	66.733	Scleropages_formosus
MGP_CAROLIEiJ_G0016383	Larp1	94	63.275	ENSSMAG00000007468	larp1	98	63.382	Scophthalmus_maximus
MGP_CAROLIEiJ_G0016383	Larp1	99	64.089	ENSSDUG00000000268	larp1	97	69.752	Seriola_dumerili
MGP_CAROLIEiJ_G0016383	Larp1	82	69.109	ENSSLDG00000016505	larp1	97	69.335	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0016383	Larp1	57	92.580	ENSSARG00000013907	-	89	92.580	Sorex_araneus
MGP_CAROLIEiJ_G0016383	Larp1	100	73.759	ENSSPUG00000012179	-	89	79.703	Sphenodon_punctatus
MGP_CAROLIEiJ_G0016383	Larp1	99	64.420	ENSSPAG00000003910	larp1	98	64.923	Stegastes_partitus
MGP_CAROLIEiJ_G0016383	Larp1	100	90.472	ENSSSCG00000017069	LARP1	100	95.424	Sus_scrofa
MGP_CAROLIEiJ_G0016383	Larp1	85	82.988	ENSTGUG00000000704	LARP1	100	82.988	Taeniopygia_guttata
MGP_CAROLIEiJ_G0016383	Larp1	99	62.912	ENSTRUG00000009470	larp1	99	63.187	Takifugu_rubripes
MGP_CAROLIEiJ_G0016383	Larp1	82	94.005	ENSTBEG00000003381	LARP1	99	94.005	Tupaia_belangeri
MGP_CAROLIEiJ_G0016383	Larp1	88	95.643	ENSTTRG00000015934	LARP1	99	95.383	Tursiops_truncatus
MGP_CAROLIEiJ_G0016383	Larp1	100	90.835	ENSUAMG00000019334	LARP1	100	90.835	Ursus_americanus
MGP_CAROLIEiJ_G0016383	Larp1	88	92.518	ENSUMAG00000002934	LARP1	99	92.518	Ursus_maritimus
MGP_CAROLIEiJ_G0016383	Larp1	83	95.978	ENSVVUG00000004644	LARP1	100	95.978	Vulpes_vulpes
MGP_CAROLIEiJ_G0016383	Larp1	94	74.038	ENSXETG00000008413	larp1	95	74.749	Xenopus_tropicalis
MGP_CAROLIEiJ_G0016383	Larp1	83	73.108	ENSXCOG00000004022	larp1	97	73.108	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0016383	Larp1	97	64.455	ENSXMAG00000018780	larp1	99	63.824	Xiphophorus_maculatus