EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0016428 (Gene tree)
Gene ID: 110305495
Gene Symbol: Mrpl55
Alias: 2810038N09Rik
Full Name: mitochondrial ribosomal protein L55
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 3400 bases
Position: chr11:54016656-54020055
Accession: 110305495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0026908	Mitoc_L55	PF09776.9	8.9e-58	1	1
MGP_CAROLIEiJ_P0026909	Mitoc_L55	PF09776.9	8.9e-58	1	1
MGP_CAROLIEiJ_P0026906	Mitoc_L55	PF09776.9	1.1e-57	1	1
MGP_CAROLIEiJ_P0026907	Mitoc_L55	PF09776.9	1.1e-57	1	1
MGP_CAROLIEiJ_P0026910	Mitoc_L55	PF09776.9	1.1e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0026910	-	726	-	MGP_CAROLIEiJ_P0026910	134 (aa)	-	-
MGP_CAROLIEiJ_T0026909	-	791	-	MGP_CAROLIEiJ_P0026909	127 (aa)	XP_021033156	UPI000A31783D
MGP_CAROLIEiJ_T0026908	-	940	XM_021177494	MGP_CAROLIEiJ_P0026908	127 (aa)	XP_021033153	UPI000A31783D
MGP_CAROLIEiJ_T0026907	-	717	-	MGP_CAROLIEiJ_P0026907	134 (aa)	-	-
MGP_CAROLIEiJ_T0026906	-	756	-	MGP_CAROLIEiJ_P0026906	134 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0016428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0016428's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0016428	Mrpl55	98	72.000	ENSG00000162910	MRPL55	100	72.368	Homo_sapiens
MGP_CAROLIEiJ_G0016428	Mrpl55	95	70.248	ENSAMEG00000016292	MRPL55	99	68.800	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0016428	Mrpl55	98	71.200	ENSANAG00000036592	MRPL55	100	69.531	Aotus_nancymaae
MGP_CAROLIEiJ_G0016428	Mrpl55	95	71.311	ENSBTAG00000020721	MRPL55	92	68.462	Bos_taurus
MGP_CAROLIEiJ_G0016428	Mrpl55	98	70.400	ENSCJAG00000016730	MRPL55	100	68.750	Callithrix_jacchus
MGP_CAROLIEiJ_G0016428	Mrpl55	95	71.074	ENSCAFG00000001176	MRPL55	99	69.600	Canis_familiaris
MGP_CAROLIEiJ_G0016428	Mrpl55	95	71.074	ENSCAFG00020005742	MRPL55	99	69.600	Canis_lupus_dingo
MGP_CAROLIEiJ_G0016428	Mrpl55	95	69.672	ENSCHIG00000024153	MRPL55	99	69.048	Capra_hircus
MGP_CAROLIEiJ_G0016428	Mrpl55	98	72.000	ENSTSYG00000002932	MRPL55	98	72.000	Carlito_syrichta
MGP_CAROLIEiJ_G0016428	Mrpl55	98	73.387	ENSCAPG00000005899	MRPL55	100	73.810	Cavia_aperea
MGP_CAROLIEiJ_G0016428	Mrpl55	98	74.194	ENSCPOG00000014241	MRPL55	100	71.875	Cavia_porcellus
MGP_CAROLIEiJ_G0016428	Mrpl55	98	70.400	ENSCCAG00000031724	MRPL55	100	68.750	Cebus_capucinus
MGP_CAROLIEiJ_G0016428	Mrpl55	98	71.200	ENSCATG00000001114	MRPL55	100	69.531	Cercocebus_atys
MGP_CAROLIEiJ_G0016428	Mrpl55	98	74.400	ENSCLAG00000000917	MRPL55	100	72.656	Chinchilla_lanigera
MGP_CAROLIEiJ_G0016428	Mrpl55	98	71.200	ENSCSAG00000016477	MRPL55	100	69.531	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0016428	Mrpl55	98	71.200	ENSCANG00000034934	MRPL55	100	69.531	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0016428	Mrpl55	100	86.614	ENSCGRG00001020506	Mrpl55	100	86.614	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0016428	Mrpl55	100	85.039	ENSCGRG00000002872	Mrpl55	100	85.039	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0016428	Mrpl55	96	62.295	ENSDNOG00000024342	MRPL55	99	60.800	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0016428	Mrpl55	95	77.686	ENSEASG00005017538	MRPL55	99	75.200	Equus_asinus_asinus
MGP_CAROLIEiJ_G0016428	Mrpl55	95	77.686	ENSECAG00000019642	MRPL55	99	75.200	Equus_caballus
MGP_CAROLIEiJ_G0016428	Mrpl55	96	71.311	ENSFCAG00000015199	MRPL55	97	71.311	Felis_catus
MGP_CAROLIEiJ_G0016428	Mrpl55	98	70.400	ENSFDAG00000006749	MRPL55	100	68.504	Fukomys_damarensis
MGP_CAROLIEiJ_G0016428	Mrpl55	98	70.400	ENSGGOG00000015709	MRPL55	100	68.750	Gorilla_gorilla
MGP_CAROLIEiJ_G0016428	Mrpl55	98	71.774	ENSHGLG00000000165	MRPL55	100	69.531	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0016428	Mrpl55	98	71.774	ENSHGLG00100007233	MRPL55	100	69.531	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016428	Mrpl55	98	71.774	ENSHGLG00100018781	MRPL55	100	69.531	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016428	Mrpl55	100	79.528	ENSJJAG00000021164	Mrpl55	100	79.528	Jaculus_jaculus
MGP_CAROLIEiJ_G0016428	Mrpl55	99	69.291	ENSLAFG00000003008	-	100	69.291	Loxodonta_africana
MGP_CAROLIEiJ_G0016428	Mrpl55	98	70.400	ENSMFAG00000003524	MRPL55	100	68.750	Macaca_fascicularis
MGP_CAROLIEiJ_G0016428	Mrpl55	94	72.269	ENSMMUG00000002790	MRPL55	100	65.455	Macaca_mulatta
MGP_CAROLIEiJ_G0016428	Mrpl55	98	70.400	ENSMNEG00000036387	MRPL55	100	68.750	Macaca_nemestrina
MGP_CAROLIEiJ_G0016428	Mrpl55	98	71.200	ENSMLEG00000043407	MRPL55	100	69.531	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0016428	Mrpl55	100	86.614	ENSMAUG00000000347	Mrpl55	100	86.614	Mesocricetus_auratus
MGP_CAROLIEiJ_G0016428	Mrpl55	98	75.200	ENSMICG00000031760	MRPL55	98	75.200	Microcebus_murinus
MGP_CAROLIEiJ_G0016428	Mrpl55	100	85.827	ENSMOCG00000022355	Mrpl55	100	85.827	Microtus_ochrogaster
MGP_CAROLIEiJ_G0016428	Mrpl55	86	58.716	ENSMODG00000013793	-	95	58.716	Monodelphis_domestica
MGP_CAROLIEiJ_G0016428	Mrpl55	100	97.761	ENSMUSG00000036860	Mrpl55	100	97.761	Mus_musculus
MGP_CAROLIEiJ_G0016428	Mrpl55	100	94.488	MGP_PahariEiJ_G0017559	Mrpl55	100	94.488	Mus_pahari
MGP_CAROLIEiJ_G0016428	Mrpl55	100	97.761	MGP_SPRETEiJ_G0017265	Mrpl55	100	97.761	Mus_spretus
MGP_CAROLIEiJ_G0016428	Mrpl55	79	80.000	ENSMPUG00000001004	MRPL55	79	80.000	Mustela_putorius_furo
MGP_CAROLIEiJ_G0016428	Mrpl55	98	72.222	ENSMLUG00000007037	MRPL55	99	72.222	Myotis_lucifugus
MGP_CAROLIEiJ_G0016428	Mrpl55	100	76.562	ENSNGAG00000023889	Mrpl55	100	76.562	Nannospalax_galili
MGP_CAROLIEiJ_G0016428	Mrpl55	98	71.200	ENSNLEG00000014215	MRPL55	100	69.531	Nomascus_leucogenys
MGP_CAROLIEiJ_G0016428	Mrpl55	91	68.966	ENSOPRG00000015086	-	84	66.129	Ochotona_princeps
MGP_CAROLIEiJ_G0016428	Mrpl55	94	73.950	ENSODEG00000001067	MRPL55	100	73.950	Octodon_degus
MGP_CAROLIEiJ_G0016428	Mrpl55	93	72.034	ENSOCUG00000015380	-	97	68.800	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0016428	Mrpl55	96	55.738	ENSOCUG00000027013	-	99	54.400	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0016428	Mrpl55	94	75.630	ENSOGAG00000010981	MRPL55	98	73.600	Otolemur_garnettii
MGP_CAROLIEiJ_G0016428	Mrpl55	95	71.311	ENSOARG00000006369	MRPL55	99	70.635	Ovis_aries
MGP_CAROLIEiJ_G0016428	Mrpl55	98	71.200	ENSPPAG00000030545	MRPL55	100	69.531	Pan_paniscus
MGP_CAROLIEiJ_G0016428	Mrpl55	96	72.131	ENSPPRG00000004595	MRPL55	97	72.131	Panthera_pardus
MGP_CAROLIEiJ_G0016428	Mrpl55	96	72.131	ENSPTIG00000008780	MRPL55	93	69.600	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0016428	Mrpl55	98	70.400	ENSPTRG00000002068	MRPL55	100	68.750	Pan_troglodytes
MGP_CAROLIEiJ_G0016428	Mrpl55	98	70.400	ENSPANG00000017717	MRPL55	100	68.750	Papio_anubis
MGP_CAROLIEiJ_G0016428	Mrpl55	100	86.614	ENSPEMG00000010381	Mrpl55	100	86.614	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0016428	Mrpl55	98	72.000	ENSPPYG00000000146	-	100	70.312	Pongo_abelii
MGP_CAROLIEiJ_G0016428	Mrpl55	84	75.701	ENSPCAG00000010591	MRPL55	66	75.701	Procavia_capensis
MGP_CAROLIEiJ_G0016428	Mrpl55	98	72.800	ENSPCOG00000013827	MRPL55	100	71.875	Propithecus_coquereli
MGP_CAROLIEiJ_G0016428	Mrpl55	100	93.701	ENSRNOG00000002943	Mrpl55	100	93.701	Rattus_norvegicus
MGP_CAROLIEiJ_G0016428	Mrpl55	98	71.200	ENSRBIG00000038180	MRPL55	100	69.531	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0016428	Mrpl55	98	71.200	ENSRROG00000033833	MRPL55	100	69.531	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0016428	Mrpl55	98	69.600	ENSSBOG00000035388	MRPL55	100	67.969	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0016428	Mrpl55	96	54.918	ENSSHAG00000014746	-	100	53.543	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0016428	Mrpl55	95	70.492	ENSSSCG00000029050	MRPL55	99	69.048	Sus_scrofa
MGP_CAROLIEiJ_G0016428	Mrpl55	96	72.131	ENSUAMG00000016465	-	97	72.131	Ursus_americanus
MGP_CAROLIEiJ_G0016428	Mrpl55	73	50.538	ENSUAMG00000022827	-	60	50.538	Ursus_americanus
MGP_CAROLIEiJ_G0016428	Mrpl55	96	71.311	ENSUMAG00000000905	MRPL55	97	71.311	Ursus_maritimus